RNA–Protein interactions for RNA: ENST00000413233.1

TPM3P1-201, Transcript of tropomyosin 3 pseudogene 1, humanhuman

BASIC

Gene TPM3P1, Length 747 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P1-201ENST00000413233 USP17L2Q6R6M4 530 aa11.28□□□□□ -0.6
TPM3P1-201ENST00000413233 FASTKD5Q7L8L6 764 aaKnown RBP11.28□□□□□ -0.6
TPM3P1-201ENST00000413233 RASAL3Q86YV0 1011 aa11.28□□□□□ -0.6
TPM3P1-201ENST00000413233 SIAH1Q8IUQ4 282 aa11.28□□□□□ -0.6
TPM3P1-201ENST00000413233 PNMA1Q8ND90 353 aa11.28□□□□□ -0.6
TPM3P1-201ENST00000413233 ZNF296Q8WUU4 475 aaPredicted RBP11.28□□□□□ -0.6
TPM3P1-201ENST00000413233 TMEM47Q9BQJ4 181 aa11.28□□□□□ -0.6
TPM3P1-201ENST00000413233 UPF3BQ9BZI7 483 aaKnown RBP11.28□□□□□ -0.6
TPM3P1-201ENST00000413233 MAF1Q9H063 256 aa11.28□□□□□ -0.6
TPM3P1-201ENST00000413233 VCPKMTQ9H867 229 aa11.28□□□□□ -0.6
TPM3P1-201ENST00000413233 INCENPQ9NQS7 918 aa11.28□□□□□ -0.6
TPM3P1-201ENST00000413233 MYH8P13535 1937 aa11.28□□□□□ -0.6
TPM3P1-201ENST00000413233 MYPNQ86TC9 1320 aa11.28□□□□□ -0.6
TPM3P1-201ENST00000413233 DOCK1Q14185 1865 aa11.27□□□□□ -0.6
TPM3P1-201ENST00000413233 RBBP6Q7Z6E9 1792 aaKnown RBP11.27□□□□□ -0.61
TPM3P1-201ENST00000413233 FAM196BA6NMK8 535 aa11.27□□□□□ -0.61
TPM3P1-201ENST00000413233 WDR46O15213 610 aaKnown RBP11.27□□□□□ -0.61
TPM3P1-201ENST00000413233 GDF11O95390 407 aa11.27□□□□□ -0.61
TPM3P1-201ENST00000413233 GTF2A2P52657 109 aa11.27□□□□□ -0.61
TPM3P1-201ENST00000413233 AK2P54819 239 aa11.27□□□□□ -0.61
TPM3P1-201ENST00000413233 TRAF1Q13077 416 aa11.27□□□□□ -0.61
TPM3P1-201ENST00000413233 PABPC4Q13310 644 aaKnown RBP eCLIP11.27□□□□□ -0.61
TPM3P1-201ENST00000413233 BECN1Q14457 450 aa11.27□□□□□ -0.61
TPM3P1-201ENST00000413233 CPLX2Q6PUV4 134 aaKnown RBP11.27□□□□□ -0.61
TPM3P1-201ENST00000413233 APOA5Q6Q788 366 aa11.27□□□□□ -0.61
TPM3P1-201ENST00000413233 ZNF654Q8IZM8 581 aa11.27□□□□□ -0.61
TPM3P1-201ENST00000413233 GTF3C2Q8WUA4 911 aaPredicted RBP11.27□□□□□ -0.61
TPM3P1-201ENST00000413233 BRF1Q92994 677 aa11.27□□□□□ -0.61
TPM3P1-201ENST00000413233 ZKSCAN4Q969J2 545 aaPredicted RBP11.27□□□□□ -0.61
TPM3P1-201ENST00000413233 INTS4Q96HW7 963 aaKnown RBP11.27□□□□□ -0.61
TPM3P1-201ENST00000413233 LLPHQ9BRT6 129 aaKnown RBP11.27□□□□□ -0.61
TPM3P1-201ENST00000413233 CLIP2Q9UDT6 1046 aa11.27□□□□□ -0.61
TPM3P1-201ENST00000413233 ZHX2Q9Y6X8 837 aa11.27□□□□□ -0.61
TPM3P1-201ENST00000413233 HTTP42858 3142 aa11.27□□□□□ -0.61
TPM3P1-201ENST00000413233 A0A0G2JLL6 359 aaPredicted RBP11.26□□□□□ -0.61
TPM3P1-201ENST00000413233 TESPA1A2RU30 521 aaPredicted RBP11.26□□□□□ -0.61
TPM3P1-201ENST00000413233 F5H6K3 240 aa11.26□□□□□ -0.61
TPM3P1-201ENST00000413233 ZBTB43O43298 467 aa11.26□□□□□ -0.61
TPM3P1-201ENST00000413233 PFKFB2O60825 505 aa11.26□□□□□ -0.61
TPM3P1-201ENST00000413233 CDKL5O76039 1030 aa11.26□□□□□ -0.61
TPM3P1-201ENST00000413233 TBC1D8O95759 1140 aa11.26□□□□□ -0.61
TPM3P1-201ENST00000413233 HOXA7P31268 230 aaPredicted RBP11.26□□□□□ -0.61
TPM3P1-201ENST00000413233 KLRC3Q07444 240 aa11.26□□□□□ -0.61
TPM3P1-201ENST00000413233 SNAPC2Q13487 334 aa11.26□□□□□ -0.61
TPM3P1-201ENST00000413233 BTNL9Q6UXG8 535 aa11.26□□□□□ -0.61
TPM3P1-201ENST00000413233 NFXL1Q6ZNB6 911 aa11.26□□□□□ -0.61
TPM3P1-201ENST00000413233 PRRT2Q7Z6L0 340 aaPredicted RBP11.26□□□□□ -0.61
TPM3P1-201ENST00000413233 FANCBQ8NB91 859 aa11.26□□□□□ -0.61
TPM3P1-201ENST00000413233 CTCFLQ8NI51 663 aaPredicted RBP11.26□□□□□ -0.61
TPM3P1-201ENST00000413233 TMOD4Q9NZQ9 345 aa11.26□□□□□ -0.61
TPM3P1-201ENST00000413233 SCAF8Q9UPN6 1271 aaKnown RBP11.26□□□□□ -0.61
TPM3P1-201ENST00000413233 CENPFP49454 3210 aa11.26□□□□□ -0.61
TPM3P1-201ENST00000413233 PALM3A6NDB9 673 aaPredicted RBP11.25□□□□□ -0.61
TPM3P1-201ENST00000413233 MANSC4A6NHS7 340 aaPredicted RBP11.25□□□□□ -0.61
TPM3P1-201ENST00000413233 UBE2Q2LH0YL09 131 aa11.25□□□□□ -0.61
TPM3P1-201ENST00000413233 PDHBP11177 359 aa11.25□□□□□ -0.61
TPM3P1-201ENST00000413233 CETPP11597 493 aa11.25□□□□□ -0.61
TPM3P1-201ENST00000413233 PDIA3P30101 505 aaKnown RBP11.25□□□□□ -0.61
TPM3P1-201ENST00000413233 ANP32AP39687 249 aaKnown RBP11.25□□□□□ -0.61
TPM3P1-201ENST00000413233 JAG1P78504 1218 aa11.25□□□□□ -0.61
TPM3P1-201ENST00000413233 SPP2Q13103 211 aa11.25□□□□□ -0.61
TPM3P1-201ENST00000413233 GRM4Q14833 912 aa11.25□□□□□ -0.61
TPM3P1-201ENST00000413233 FBXO46Q6PJ61 603 aaPredicted RBP11.25□□□□□ -0.61
TPM3P1-201ENST00000413233 FAM160B2Q86V87 743 aa11.25□□□□□ -0.61
TPM3P1-201ENST00000413233 HSCBQ8IWL3 235 aa11.25□□□□□ -0.61
TPM3P1-201ENST00000413233 STK11IPQ8N1F8 1099 aa11.25□□□□□ -0.61
TPM3P1-201ENST00000413233 CHURC1Q8WUH1 139 aa11.25□□□□□ -0.61
TPM3P1-201ENST00000413233 OPTNQ96CV9 577 aa11.25□□□□□ -0.61
TPM3P1-201ENST00000413233 WNK4Q96J92 1243 aa11.25□□□□□ -0.61
TPM3P1-201ENST00000413233 SLKQ9H2G2 1235 aaPredicted RBP11.25□□□□□ -0.61
TPM3P1-201ENST00000413233 KLF18A0A0U1RQI7 1052 aa11.24□□□□□ -0.61
TPM3P1-201ENST00000413233 A0A1W2PRG0 241 aa11.24□□□□□ -0.61
TPM3P1-201ENST00000413233 hCG_1984214I3L0E3 225 aa11.24□□□□□ -0.61
TPM3P1-201ENST00000413233 K7ELQ4 463 aaPredicted RBP11.24□□□□□ -0.61
TPM3P1-201ENST00000413233 NMT2O60551 498 aa11.24□□□□□ -0.61
TPM3P1-201ENST00000413233 PARP1P09874 1014 aaKnown RBP11.24□□□□□ -0.61
TPM3P1-201ENST00000413233 BMP3P12645 472 aa11.24□□□□□ -0.61
TPM3P1-201ENST00000413233 SLC1A4P43007 532 aa11.24□□□□□ -0.61
TPM3P1-201ENST00000413233 METAP2P50579 478 aaKnown RBP eCLIP11.24□□□□□ -0.61
TPM3P1-201ENST00000413233 HMGN5P82970 282 aaKnown RBP11.24□□□□□ -0.61
TPM3P1-201ENST00000413233 ZNF543Q08ER8 600 aa11.24□□□□□ -0.61
TPM3P1-201ENST00000413233 CUL4AQ13619 759 aa11.24□□□□□ -0.61
TPM3P1-201ENST00000413233 SPRYD7Q5W111 196 aa11.24□□□□□ -0.61
TPM3P1-201ENST00000413233 SLFN13Q68D06 897 aa11.24□□□□□ -0.61
TPM3P1-201ENST00000413233 LBX2Q6XYB7 198 aa11.24□□□□□ -0.61
TPM3P1-201ENST00000413233 CHST3Q7LGC8 479 aa11.24□□□□□ -0.61
TPM3P1-201ENST00000413233 ZNF713Q8N859 430 aaPredicted RBP11.24□□□□□ -0.61
TPM3P1-201ENST00000413233 ZNF579Q8NAF0 562 aaKnown RBP11.24□□□□□ -0.61
TPM3P1-201ENST00000413233 FEZ1Q99689 392 aa11.24□□□□□ -0.61
TPM3P1-201ENST00000413233 ZKSCAN3Q9BRR0 538 aa11.24□□□□□ -0.61
TPM3P1-201ENST00000413233 SPZ1Q9BXG8 430 aa11.24□□□□□ -0.61
TPM3P1-201ENST00000413233 HOXC10Q9NYD6 342 aa11.24□□□□□ -0.61
TPM3P1-201ENST00000413233 FEM1BQ9UK73 627 aa11.24□□□□□ -0.61
TPM3P1-201ENST00000413233 TPCN1Q9ULQ1 816 aa11.24□□□□□ -0.61
TPM3P1-201ENST00000413233 KIF3AQ9Y496 699 aa11.24□□□□□ -0.61
TPM3P1-201ENST00000413233 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.24□□□□□ -0.61
TPM3P1-201ENST00000413233 BRCA2P51587 3418 aa11.23□□□□□ -0.61
TPM3P1-201ENST00000413233 USP17L15C9J2P7 530 aa11.23□□□□□ -0.61
TPM3P1-201ENST00000413233 USP17L13C9JLJ4 530 aa11.23□□□□□ -0.61
TPM3P1-201ENST00000413233 USP17L11C9JVI0 530 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms