RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 CWC22Q9HCG8 908 aaKnown RBP12.84□□□□□ -0.35
CHMP3-205ENST00000409810 ISY1Q9ULR0 285 aaKnown RBP12.84□□□□□ -0.35
CHMP3-205ENST00000409810 PTPN22Q9Y2R2 807 aa12.84□□□□□ -0.35
CHMP3-205ENST00000409810 ECM2O94769 699 aaPredicted RBP12.83□□□□□ -0.36
CHMP3-205ENST00000409810 BMP3P12645 472 aa12.83□□□□□ -0.36
CHMP3-205ENST00000409810 MAPK4P31152 587 aa12.83□□□□□ -0.36
CHMP3-205ENST00000409810 SLC1A4P43007 532 aa12.83□□□□□ -0.36
CHMP3-205ENST00000409810 SAMD1Q6SPF0 538 aaPredicted RBP12.83□□□□□ -0.36
CHMP3-205ENST00000409810 NCOA7Q8NI08 942 aa12.83□□□□□ -0.36
CHMP3-205ENST00000409810 ABHD8Q96I13 439 aa12.83□□□□□ -0.36
CHMP3-205ENST00000409810 GMCL1Q96IK5 515 aa12.83□□□□□ -0.36
CHMP3-205ENST00000409810 SLF1Q9BQI6 1058 aa12.83□□□□□ -0.36
CHMP3-205ENST00000409810 TXNRD2Q9NNW7 524 aa12.83□□□□□ -0.36
CHMP3-205ENST00000409810 RBPJLQ9UBG7 517 aa12.83□□□□□ -0.36
CHMP3-205ENST00000409810 SRRDQ9UH36 339 aa12.83□□□□□ -0.36
CHMP3-205ENST00000409810 FEM1BQ9UK73 627 aa12.83□□□□□ -0.36
CHMP3-205ENST00000409810 PPP1R9AQ9ULJ8 1098 aa12.83□□□□□ -0.36
CHMP3-205ENST00000409810 CTDP1Q9Y5B0 961 aaPredicted RBP12.83□□□□□ -0.36
CHMP3-205ENST00000409810 PLXNB2O15031 1838 aa12.83□□□□□ -0.36
CHMP3-205ENST00000409810 ERICH2A1L162 156 aa12.82□□□□□ -0.36
CHMP3-205ENST00000409810 REC8O95072 547 aa12.82□□□□□ -0.36
CHMP3-205ENST00000409810 CTGFP29279 349 aa12.82□□□□□ -0.36
CHMP3-205ENST00000409810 STAT2P52630 851 aa12.82□□□□□ -0.36
CHMP3-205ENST00000409810 SART3Q15020 963 aaKnown RBP12.82□□□□□ -0.36
CHMP3-205ENST00000409810 DGKHQ86XP1 1220 aa12.82□□□□□ -0.36
CHMP3-205ENST00000409810 RAET1EQ8TD07 263 aa12.82□□□□□ -0.36
CHMP3-205ENST00000409810 DCAF4Q8WV16 495 aa12.82□□□□□ -0.36
CHMP3-205ENST00000409810 SOCS4Q8WXH5 440 aa12.82□□□□□ -0.36
CHMP3-205ENST00000409810 ATG4CQ96DT6 458 aa12.82□□□□□ -0.36
CHMP3-205ENST00000409810 ZSCAN10Q96SZ4 725 aaPredicted RBP12.82□□□□□ -0.36
CHMP3-205ENST00000409810 NUP88Q99567 741 aaPredicted RBP12.82□□□□□ -0.36
CHMP3-205ENST00000409810 TMEM47Q9BQJ4 181 aa12.82□□□□□ -0.36
CHMP3-205ENST00000409810 HPS5Q9UPZ3 1129 aa12.82□□□□□ -0.36
CHMP3-205ENST00000409810 E7EWF7 191 aa12.81□□□□□ -0.36
CHMP3-205ENST00000409810 CNMDO75829 334 aa12.81□□□□□ -0.36
CHMP3-205ENST00000409810 FDX1P10109 184 aa12.81□□□□□ -0.36
CHMP3-205ENST00000409810 COPB2P35606 906 aa12.81□□□□□ -0.36
CHMP3-205ENST00000409810 CAP1Q01518 475 aa12.81□□□□□ -0.36
CHMP3-205ENST00000409810 PRKCZQ05513 592 aa12.81□□□□□ -0.36
CHMP3-205ENST00000409810 IKQ13123 557 aaPredicted RBP12.81□□□□□ -0.36
CHMP3-205ENST00000409810 CCDC96Q2M329 555 aa12.81□□□□□ -0.36
CHMP3-205ENST00000409810 NBPF11Q86T75 865 aa12.81□□□□□ -0.36
CHMP3-205ENST00000409810 FAM160B2Q86V87 743 aa12.81□□□□□ -0.36
CHMP3-205ENST00000409810 PRPF38AQ8NAV1 312 aaKnown RBP12.81□□□□□ -0.36
CHMP3-205ENST00000409810 CHURC1Q8WUH1 139 aa12.81□□□□□ -0.36
CHMP3-205ENST00000409810 ZKSCAN3Q9BRR0 538 aa12.81□□□□□ -0.36
CHMP3-205ENST00000409810 SPATC1LQ9H0A9 340 aa12.81□□□□□ -0.36
CHMP3-205ENST00000409810 KAT14Q9H8E8 782 aa12.81□□□□□ -0.36
CHMP3-205ENST00000409810 ZSWIM5Q9P217 1185 aa12.81□□□□□ -0.36
CHMP3-205ENST00000409810 PTCH2Q9Y6C5 1203 aa12.81□□□□□ -0.36
CHMP3-205ENST00000409810 IVNS1ABPQ9Y6Y0 642 aa12.81□□□□□ -0.36
CHMP3-205ENST00000409810 ZNFX1Q9P2E3 1918 aaKnown RBP12.81□□□□□ -0.36
CHMP3-205ENST00000409810 TNKSO95271 1327 aa12.81□□□□□ -0.36
CHMP3-205ENST00000409810 HTTP42858 3142 aa12.81□□□□□ -0.36
CHMP3-205ENST00000409810 MYH6P13533 1939 aa12.8□□□□□ -0.36
CHMP3-205ENST00000409810 TMEM232C9JQI7 657 aa12.8□□□□□ -0.36
CHMP3-205ENST00000409810 VWA5AO00534 786 aa12.8□□□□□ -0.36
CHMP3-205ENST00000409810 SLC27A2O14975 620 aa12.8□□□□□ -0.36
CHMP3-205ENST00000409810 PLA2G6O60733 806 aa12.8□□□□□ -0.36
CHMP3-205ENST00000409810 MCCP23508 829 aa12.8□□□□□ -0.36
CHMP3-205ENST00000409810 PLS1Q14651 629 aa12.8□□□□□ -0.36
CHMP3-205ENST00000409810 NECTIN1Q15223 517 aa12.8□□□□□ -0.36
CHMP3-205ENST00000409810 Q3C1V9 767 aa12.8□□□□□ -0.36
CHMP3-205ENST00000409810 SLC9C1Q4G0N8 1177 aa12.8□□□□□ -0.36
CHMP3-205ENST00000409810 IFIT1BQ5T764 474 aaKnown RBP12.8□□□□□ -0.36
CHMP3-205ENST00000409810 WDR78Q5VTH9 848 aa12.8□□□□□ -0.36
CHMP3-205ENST00000409810 CREB3L3Q68CJ9 461 aa12.8□□□□□ -0.36
CHMP3-205ENST00000409810 RCSD1Q6JBY9 416 aa12.8□□□□□ -0.36
CHMP3-205ENST00000409810 PLEKHH3Q7Z736 793 aa12.8□□□□□ -0.36
CHMP3-205ENST00000409810 SHCBP1Q8NEM2 672 aa12.8□□□□□ -0.36
CHMP3-205ENST00000409810 ANKS1AQ92625 1134 aa12.8□□□□□ -0.36
CHMP3-205ENST00000409810 KIFC2Q96AC6 838 aa12.8□□□□□ -0.36
CHMP3-205ENST00000409810 NUDT12Q9BQG2 462 aa12.8□□□□□ -0.36
CHMP3-205ENST00000409810 FBXO28Q9NVF7 368 aa12.8□□□□□ -0.36
CHMP3-205ENST00000409810 BTBD7Q9P203 1132 aa12.8□□□□□ -0.36
CHMP3-205ENST00000409810 ADAMTS5Q9UNA0 930 aa12.8□□□□□ -0.36
CHMP3-205ENST00000409810 MTMR7Q9Y216 660 aa12.8□□□□□ -0.36
CHMP3-205ENST00000409810 CENPFP49454 3210 aa12.8□□□□□ -0.36
CHMP3-205ENST00000409810 ZNF236Q9UL36 1845 aa12.79□□□□□ -0.36
CHMP3-205ENST00000409810 EIF5BO60841 1220 aaKnown RBP12.79□□□□□ -0.36
CHMP3-205ENST00000409810 ZBED4O75132 1171 aa12.79□□□□□ -0.36
CHMP3-205ENST00000409810 SLC25A27O95847 323 aa12.79□□□□□ -0.36
CHMP3-205ENST00000409810 ZKSCAN1P17029 563 aaPredicted RBP12.79□□□□□ -0.36
CHMP3-205ENST00000409810 FLT3LGP49771 235 aa12.79□□□□□ -0.36
CHMP3-205ENST00000409810 IRF5Q13568 498 aa12.79□□□□□ -0.36
CHMP3-205ENST00000409810 KCTD1Q719H9 257 aa12.79□□□□□ -0.36
CHMP3-205ENST00000409810 GPR142Q7Z601 462 aa12.79□□□□□ -0.36
CHMP3-205ENST00000409810 ENAHQ8N8S7 591 aaPredicted RBP12.79□□□□□ -0.36
CHMP3-205ENST00000409810 SLAIN1Q8ND83 568 aa12.79□□□□□ -0.36
CHMP3-205ENST00000409810 PNMA1Q8ND90 353 aa12.79□□□□□ -0.36
CHMP3-205ENST00000409810 PORCNQ9H237 461 aa12.79□□□□□ -0.36
CHMP3-205ENST00000409810 CCDC85CA6NKD9 419 aa12.78□□□□□ -0.36
CHMP3-205ENST00000409810 IFIT3O14879 490 aaKnown RBP12.78□□□□□ -0.36
CHMP3-205ENST00000409810 EPB41L2O43491 1005 aaKnown RBP12.78□□□□□ -0.36
CHMP3-205ENST00000409810 PEX10O60683 326 aa12.78□□□□□ -0.36
CHMP3-205ENST00000409810 PDHBP11177 359 aa12.78□□□□□ -0.36
CHMP3-205ENST00000409810 STAT3P40763 770 aa12.78□□□□□ -0.36
CHMP3-205ENST00000409810 OAZ1P54368 228 aa12.78□□□□□ -0.36
CHMP3-205ENST00000409810 KRT32Q14532 448 aa12.78□□□□□ -0.36
CHMP3-205ENST00000409810 TMEM132BQ14DG7 1078 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms