RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 GFOD1Q9NXC2 390 aa7.48□□□□□ -1.21
HMGB3P19-201ENST00000403971 PIM2Q9P1W9 311 aa7.48□□□□□ -1.21
HMGB3P19-201ENST00000403971 APEX2Q9UBZ4 518 aa7.48□□□□□ -1.21
HMGB3P19-201ENST00000403971 PCDHB12Q9Y5F1 795 aa7.48□□□□□ -1.21
HMGB3P19-201ENST00000403971 SHROOM4Q9ULL8 1493 aa7.48□□□□□ -1.21
HMGB3P19-201ENST00000403971 WASH4PA8MWX3 477 aa7.47□□□□□ -1.21
HMGB3P19-201ENST00000403971 FAM155AB1AL88 458 aaPredicted RBP7.47□□□□□ -1.21
HMGB3P19-201ENST00000403971 CEACAM5P06731 702 aa7.47□□□□□ -1.21
HMGB3P19-201ENST00000403971 CD247P20963 164 aa7.47□□□□□ -1.21
HMGB3P19-201ENST00000403971 RASGRF1Q13972 1273 aa7.47□□□□□ -1.21
HMGB3P19-201ENST00000403971 NFE2L2Q16236 605 aa7.47□□□□□ -1.21
HMGB3P19-201ENST00000403971 CDKAL1Q5VV42 579 aa7.47□□□□□ -1.21
HMGB3P19-201ENST00000403971 GIMAP6Q6P9H5 292 aa7.47□□□□□ -1.21
HMGB3P19-201ENST00000403971 SPATC1Q76KD6 591 aa7.47□□□□□ -1.21
HMGB3P19-201ENST00000403971 EEPD1Q7L9B9 569 aa7.47□□□□□ -1.21
HMGB3P19-201ENST00000403971 SPACA3Q8IXA5 215 aa7.47□□□□□ -1.21
HMGB3P19-201ENST00000403971 ADCY4Q8NFM4 1077 aa7.47□□□□□ -1.21
HMGB3P19-201ENST00000403971 MRFAP1L1Q96HT8 127 aa7.47□□□□□ -1.21
HMGB3P19-201ENST00000403971 COX4I2Q96KJ9 171 aa7.47□□□□□ -1.21
HMGB3P19-201ENST00000403971 GP6Q9HCN6 339 aa7.47□□□□□ -1.21
HMGB3P19-201ENST00000403971 ZC3H7BQ9UGR2 993 aaKnown RBP7.47□□□□□ -1.21
HMGB3P19-201ENST00000403971 PFDN2Q9UHV9 154 aa7.47□□□□□ -1.21
HMGB3P19-201ENST00000403971 KCNH3Q9ULD8 1083 aa7.47□□□□□ -1.21
HMGB3P19-201ENST00000403971 ANKRD34BA5PLL1 514 aa7.46□□□□□ -1.22
HMGB3P19-201ENST00000403971 MEIS1O00470 390 aa7.46□□□□□ -1.22
HMGB3P19-201ENST00000403971 ZNF445P59923 1031 aa7.46□□□□□ -1.22
HMGB3P19-201ENST00000403971 SLC10A6Q3KNW5 377 aa7.46□□□□□ -1.22
HMGB3P19-201ENST00000403971 ANKRD39Q53RE8 183 aa7.46□□□□□ -1.22
HMGB3P19-201ENST00000403971 ADAT2Q7Z6V5 191 aaKnown RBP7.46□□□□□ -1.22
HMGB3P19-201ENST00000403971 ZNF513Q8N8E2 541 aaPredicted RBP7.46□□□□□ -1.22
HMGB3P19-201ENST00000403971 DNAJC7Q99615 494 aa7.46□□□□□ -1.22
HMGB3P19-201ENST00000403971 ST14Q9Y5Y6 855 aa7.46□□□□□ -1.22
HMGB3P19-201ENST00000403971 H3BS24 57 aa7.45□□□□□ -1.22
HMGB3P19-201ENST00000403971 DIAPH1O60610 1272 aaKnown RBP7.45□□□□□ -1.22
HMGB3P19-201ENST00000403971 PRAMEF1O95521 474 aa7.45□□□□□ -1.22
HMGB3P19-201ENST00000403971 FOSL1P15407 271 aa7.45□□□□□ -1.22
HMGB3P19-201ENST00000403971 NMIQ13287 307 aaPredicted RBP7.45□□□□□ -1.22
HMGB3P19-201ENST00000403971 CPSF6Q16630 551 aaKnown RBP eCLIP7.45□□□□□ -1.22
HMGB3P19-201ENST00000403971 SV2CQ496J9 727 aa7.45□□□□□ -1.22
HMGB3P19-201ENST00000403971 MTERF2Q49AM1 385 aa7.45□□□□□ -1.22
HMGB3P19-201ENST00000403971 LRP10Q7Z4F1 713 aa7.45□□□□□ -1.22
HMGB3P19-201ENST00000403971 PPP1R14AQ96A00 147 aa7.45□□□□□ -1.22
HMGB3P19-201ENST00000403971 HSPA12BQ96MM6 686 aa7.45□□□□□ -1.22
HMGB3P19-201ENST00000403971 APBA2Q99767 749 aa7.45□□□□□ -1.22
HMGB3P19-201ENST00000403971 DUSP15Q9H1R2 295 aaPredicted RBP7.45□□□□□ -1.22
HMGB3P19-201ENST00000403971 ITGA4P13612 1032 aa7.44□□□□□ -1.22
HMGB3P19-201ENST00000403971 IFRD2Q12894 506 aaPredicted RBP7.44□□□□□ -1.22
HMGB3P19-201ENST00000403971 TCEAL1Q15170 157 aa7.44□□□□□ -1.22
HMGB3P19-201ENST00000403971 NOL9Q5SY16 702 aaKnown RBP7.44□□□□□ -1.22
HMGB3P19-201ENST00000403971 SLC51AQ86UW1 340 aa7.44□□□□□ -1.22
HMGB3P19-201ENST00000403971 LILRB2Q8N423 598 aa7.44□□□□□ -1.22
HMGB3P19-201ENST00000403971 PIWIL2Q8TC59 973 aaKnown RBP7.44□□□□□ -1.22
HMGB3P19-201ENST00000403971 NETO1Q8TDF5 533 aa7.44□□□□□ -1.22
HMGB3P19-201ENST00000403971 GBP3Q9H0R5 595 aa7.44□□□□□ -1.22
HMGB3P19-201ENST00000403971 MKNK2Q9HBH9 465 aa7.44□□□□□ -1.22
HMGB3P19-201ENST00000403971 ZMYM5Q9UJ78 669 aa7.44□□□□□ -1.22
HMGB3P19-201ENST00000403971 SUGT1Q9Y2Z0 365 aa7.44□□□□□ -1.22
HMGB3P19-201ENST00000403971 SIGLEC6O43699 453 aa7.43□□□□□ -1.22
HMGB3P19-201ENST00000403971 ZNF143P52747 638 aaPredicted RBP7.43□□□□□ -1.22
HMGB3P19-201ENST00000403971 PPP2R5DQ14738 602 aa7.43□□□□□ -1.22
HMGB3P19-201ENST00000403971 JAZF1Q86VZ6 243 aa7.43□□□□□ -1.22
HMGB3P19-201ENST00000403971 FIBCD1Q8N539 461 aa7.43□□□□□ -1.22
HMGB3P19-201ENST00000403971 ST13P5Q8NFI4 369 aaPredicted RBP7.43□□□□□ -1.22
HMGB3P19-201ENST00000403971 NOL6Q9H6R4 1146 aaKnown RBP7.43□□□□□ -1.22
HMGB3P19-201ENST00000403971 KANSL2Q9H9L4 492 aa7.43□□□□□ -1.22
HMGB3P19-201ENST00000403971 WHRNQ9P202 907 aa7.43□□□□□ -1.22
HMGB3P19-201ENST00000403971 ZSWIM5Q9P217 1185 aa7.43□□□□□ -1.22
HMGB3P19-201ENST00000403971 TBX1O43435 398 aa7.42□□□□□ -1.22
HMGB3P19-201ENST00000403971 PPM1BO75688 479 aa7.42□□□□□ -1.22
HMGB3P19-201ENST00000403971 SRFP11831 508 aa7.42□□□□□ -1.22
HMGB3P19-201ENST00000403971 SSRP1Q08945 709 aaKnown RBP7.42□□□□□ -1.22
HMGB3P19-201ENST00000403971 IFI16Q16666 785 aaKnown RBP7.42□□□□□ -1.22
HMGB3P19-201ENST00000403971 CLEC16AQ2KHT3 1053 aa7.42□□□□□ -1.22
HMGB3P19-201ENST00000403971 NOP9Q86U38 636 aaKnown RBP7.42□□□□□ -1.22
HMGB3P19-201ENST00000403971 LRRN4CLQ8ND94 238 aa7.42□□□□□ -1.22
HMGB3P19-201ENST00000403971 UBE2FQ969M7 185 aa7.42□□□□□ -1.22
HMGB3P19-201ENST00000403971 HDAC8Q9BY41 377 aa7.42□□□□□ -1.22
HMGB3P19-201ENST00000403971 GPR62Q9BZJ7 368 aa7.42□□□□□ -1.22
HMGB3P19-201ENST00000403971 ASCC2Q9H1I8 757 aaPredicted RBP7.42□□□□□ -1.22
HMGB3P19-201ENST00000403971 CHST7Q9NS84 486 aa7.42□□□□□ -1.22
HMGB3P19-201ENST00000403971 SEMA3GQ9NS98 782 aa7.42□□□□□ -1.22
HMGB3P19-201ENST00000403971 FHOD1Q9Y613 1164 aa7.42□□□□□ -1.22
HMGB3P19-201ENST00000403971 ITGAVP06756 1048 aa7.41□□□□□ -1.22
HMGB3P19-201ENST00000403971 NAT2P11245 290 aa7.41□□□□□ -1.22
HMGB3P19-201ENST00000403971 CTSKP43235 329 aa7.41□□□□□ -1.22
HMGB3P19-201ENST00000403971 ZNF227Q86WZ6 799 aa7.41□□□□□ -1.22
HMGB3P19-201ENST00000403971 SYTL5Q8TDW5 730 aaPredicted RBP7.41□□□□□ -1.22
HMGB3P19-201ENST00000403971 ZDHHC15Q96MV8 337 aa7.41□□□□□ -1.22
HMGB3P19-201ENST00000403971 DSCC1Q9BVC3 393 aa7.41□□□□□ -1.22
HMGB3P19-201ENST00000403971 LRP2BPQ9P2M1 347 aa7.41□□□□□ -1.22
HMGB3P19-201ENST00000403971 CGGBP1Q9UFW8 167 aaPredicted RBP7.41□□□□□ -1.22
HMGB3P19-201ENST00000403971 AKT3Q9Y243 479 aa7.41□□□□□ -1.22
HMGB3P19-201ENST00000403971 MRPL42Q9Y6G3 142 aaKnown RBP7.41□□□□□ -1.22
HMGB3P19-201ENST00000403971 KDM2BQ8NHM5 1336 aa7.41□□□□□ -1.22
HMGB3P19-201ENST00000403971 A0A1W2PQU0 124 aa7.4□□□□□ -1.22
HMGB3P19-201ENST00000403971 H0Y8X5 98 aa7.4□□□□□ -1.22
HMGB3P19-201ENST00000403971 SMARCA5O60264 1052 aaPredicted RBP7.4□□□□□ -1.22
HMGB3P19-201ENST00000403971 MED26O95402 600 aa7.4□□□□□ -1.22
HMGB3P19-201ENST00000403971 TPP2P29144 1249 aaPredicted RBP7.4□□□□□ -1.22
HMGB3P19-201ENST00000403971 CD96P40200 585 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms