RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 PES1O00541 588 aaKnown RBP15.75■□□□□ 0.11
APOB-202ENST00000399256 GGCXP38435 758 aa15.75■□□□□ 0.11
APOB-202ENST00000399256 TCP11X2Q5H9J9 407 aa15.75■□□□□ 0.11
APOB-202ENST00000399256 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.75■□□□□ 0.11
APOB-202ENST00000399256 PAK1Q13153 545 aa15.74■□□□□ 0.11
APOB-202ENST00000399256 MAP9Q49MG5 647 aa15.74■□□□□ 0.11
APOB-202ENST00000399256 NELFBQ8WX92 580 aa15.74■□□□□ 0.11
APOB-202ENST00000399256 SAR1BQ9Y6B6 198 aa15.74■□□□□ 0.11
APOB-202ENST00000399256 NID2Q14112 1375 aa15.74■□□□□ 0.11
APOB-202ENST00000399256 CCDC196A0A1B0GTZ2 297 aa15.74■□□□□ 0.11
APOB-202ENST00000399256 NUTM2BA6NNL0 878 aaPredicted RBP15.74■□□□□ 0.11
APOB-202ENST00000399256 NUTM2EB1AL46 878 aaPredicted RBP15.74■□□□□ 0.11
APOB-202ENST00000399256 MYBL2P10244 700 aa15.74■□□□□ 0.11
APOB-202ENST00000399256 IL2RBP14784 551 aa15.74■□□□□ 0.11
APOB-202ENST00000399256 KRT2P35908 639 aa15.74■□□□□ 0.11
APOB-202ENST00000399256 CCDC122Q5T0U0 273 aa15.74■□□□□ 0.11
APOB-202ENST00000399256 ZBTB38Q8NAP3 1195 aaPredicted RBP15.74■□□□□ 0.11
APOB-202ENST00000399256 ANKRD20A12PQ8NF67 263 aa15.74■□□□□ 0.11
APOB-202ENST00000399256 ZC3H4Q9UPT8 1303 aaKnown RBP15.74■□□□□ 0.11
APOB-202ENST00000399256 TTC26A0AVF1 554 aa15.74■□□□□ 0.11
APOB-202ENST00000399256 PSMD14O00487 310 aa15.74■□□□□ 0.11
APOB-202ENST00000399256 HERVK_113P62684 666 aa15.74■□□□□ 0.11
APOB-202ENST00000399256 TRIM14Q14142 442 aa15.74■□□□□ 0.11
APOB-202ENST00000399256 COG1Q8WTW3 980 aa15.74■□□□□ 0.11
APOB-202ENST00000399256 DRC1Q96MC2 740 aa15.74■□□□□ 0.11
APOB-202ENST00000399256 CDHR2Q9BYE9 1310 aa15.74■□□□□ 0.11
APOB-202ENST00000399256 DNAJC21Q5F1R6 531 aaKnown RBP15.73■□□□□ 0.11
APOB-202ENST00000399256 VGLL2Q8N8G2 317 aa15.73■□□□□ 0.11
APOB-202ENST00000399256 CAGE1Q8TC20 777 aa15.73■□□□□ 0.11
APOB-202ENST00000399256 ZNF512BQ96KM6 892 aaPredicted RBP15.73■□□□□ 0.11
APOB-202ENST00000399256 CRACR2AQ9BSW2 395 aa15.73■□□□□ 0.11
APOB-202ENST00000399256 RABEP2Q9H5N1 569 aa15.73■□□□□ 0.11
APOB-202ENST00000399256 RWDD2AQ9UIY3 292 aa15.73■□□□□ 0.11
APOB-202ENST00000399256 ANKRD18BA2A2Z9 1011 aa15.73■□□□□ 0.11
APOB-202ENST00000399256 LRRC10BA6NIK2 292 aa15.73■□□□□ 0.11
APOB-202ENST00000399256 LCORLQ8N3X6 602 aa15.73■□□□□ 0.11
APOB-202ENST00000399256 GDAQ9Y2T3 454 aa15.73■□□□□ 0.11
APOB-202ENST00000399256 SLC4A4Q9Y6R1 1079 aa15.73■□□□□ 0.11
APOB-202ENST00000399256 SNAP23O00161 211 aa15.72■□□□□ 0.11
APOB-202ENST00000399256 ZNF185O15231 689 aa15.72■□□□□ 0.11
APOB-202ENST00000399256 PDE8BO95263 885 aa15.72■□□□□ 0.11
APOB-202ENST00000399256 SPAG1Q07617 926 aa15.72■□□□□ 0.11
APOB-202ENST00000399256 STAG1Q8WVM7 1258 aa15.72■□□□□ 0.11
APOB-202ENST00000399256 FERMT2Q96AC1 680 aa15.72■□□□□ 0.11
APOB-202ENST00000399256 UBAC1Q9BSL1 405 aa15.72■□□□□ 0.11
APOB-202ENST00000399256 PLA2G12BQ9BX93 195 aa15.72■□□□□ 0.11
APOB-202ENST00000399256 HAUS4Q9H6D7 363 aa15.72■□□□□ 0.11
APOB-202ENST00000399256 GNL3LQ9NVN8 582 aaKnown RBP15.72■□□□□ 0.11
APOB-202ENST00000399256 ARID4AP29374 1257 aaPredicted RBP15.72■□□□□ 0.11
APOB-202ENST00000399256 PTGDRQ13258 359 aa15.72■□□□□ 0.11
APOB-202ENST00000399256 MICALL1Q8N3F8 863 aa15.72■□□□□ 0.11
APOB-202ENST00000399256 JAKMIP2Q96AA8 810 aa15.72■□□□□ 0.11
APOB-202ENST00000399256 MTRQ99707 1265 aa15.72■□□□□ 0.11
APOB-202ENST00000399256 SELENOOQ9BVL4 669 aa15.72■□□□□ 0.11
APOB-202ENST00000399256 BCL9LQ86UU0 1499 aa15.72■□□□□ 0.11
APOB-202ENST00000399256 WNK3Q9BYP7 1800 aa15.72■□□□□ 0.11
APOB-202ENST00000399256 TRIM49BA6NDI0 452 aa15.72■□□□□ 0.11
APOB-202ENST00000399256 XBP1P17861 261 aa15.72■□□□□ 0.11
APOB-202ENST00000399256 MCM3P25205 808 aa15.72■□□□□ 0.11
APOB-202ENST00000399256 PKN1Q16512 942 aa15.72■□□□□ 0.11
APOB-202ENST00000399256 KIAA1328Q86T90 577 aa15.72■□□□□ 0.11
APOB-202ENST00000399256 EFCAB13Q8IY85 973 aa15.72■□□□□ 0.11
APOB-202ENST00000399256 MIGA1Q8NAN2 632 aa15.72■□□□□ 0.11
APOB-202ENST00000399256 SPATA5Q8NB90 893 aa15.72■□□□□ 0.11
APOB-202ENST00000399256 OR8K1Q8NGG5 319 aa15.72■□□□□ 0.11
APOB-202ENST00000399256 ZCRB1Q8TBF4 217 aaKnown RBP15.72■□□□□ 0.11
APOB-202ENST00000399256 KCPQ6ZWJ8 1503 aa15.72■□□□□ 0.11
APOB-202ENST00000399256 CHD4Q14839 1912 aa15.71■□□□□ 0.11
APOB-202ENST00000399256 C2orf54Q08AI8 447 aa15.71■□□□□ 0.11
APOB-202ENST00000399256 MAP3K12Q12852 859 aa15.71■□□□□ 0.11
APOB-202ENST00000399256 TTC38Q5R3I4 469 aa15.71■□□□□ 0.11
APOB-202ENST00000399256 KIF6Q6ZMV9 814 aa15.71■□□□□ 0.11
APOB-202ENST00000399256 PHF20Q9BVI0 1012 aa15.71■□□□□ 0.11
APOB-202ENST00000399256 KAT14Q9H8E8 782 aa15.71■□□□□ 0.11
APOB-202ENST00000399256 DISP2A7MBM2 1401 aa15.71■□□□□ 0.11
APOB-202ENST00000399256 PCDH11XQ9BZA7 1347 aa15.71■□□□□ 0.11
APOB-202ENST00000399256 PCDH11YQ9BZA8 1340 aa15.71■□□□□ 0.11
APOB-202ENST00000399256 SMIM22K7EJ46 135 aa15.71■□□□□ 0.11
APOB-202ENST00000399256 AGPSO00116 658 aa15.71■□□□□ 0.11
APOB-202ENST00000399256 UQCRFS1P1P0C7P4 283 aa15.71■□□□□ 0.11
APOB-202ENST00000399256 CCT5P48643 541 aa15.71■□□□□ 0.11
APOB-202ENST00000399256 E2F4Q16254 413 aa15.71■□□□□ 0.11
APOB-202ENST00000399256 TADA2BQ86TJ2 420 aa15.71■□□□□ 0.11
APOB-202ENST00000399256 RNF26Q9BY78 433 aaPredicted RBP15.71■□□□□ 0.11
APOB-202ENST00000399256 EHD4Q9H223 541 aa15.71■□□□□ 0.11
APOB-202ENST00000399256 LUC7L2Q9Y383 392 aaKnown RBP15.71■□□□□ 0.11
APOB-202ENST00000399256 V9GY48 417 aaPredicted RBP15.71■□□□□ 0.11
APOB-202ENST00000399256 SLIT2O94813 1529 aa15.7■□□□□ 0.1
APOB-202ENST00000399256 PLEKHA8P1O95397 391 aa15.7■□□□□ 0.1
APOB-202ENST00000399256 PAPD7Q5XG87 772 aaKnown RBP15.7■□□□□ 0.1
APOB-202ENST00000399256 FAM76AQ8TAV0 307 aa15.7■□□□□ 0.1
APOB-202ENST00000399256 TNKSO95271 1327 aa15.7■□□□□ 0.1
APOB-202ENST00000399256 PDE2AO00408 941 aaPredicted RBP15.7■□□□□ 0.1
APOB-202ENST00000399256 PARP1P09874 1014 aaKnown RBP15.7■□□□□ 0.1
APOB-202ENST00000399256 PRCPP42785 496 aa15.7■□□□□ 0.1
APOB-202ENST00000399256 CTSWP56202 376 aa15.7■□□□□ 0.1
APOB-202ENST00000399256 RASGRF1Q13972 1273 aa15.7■□□□□ 0.1
APOB-202ENST00000399256 WDR59Q6PJI9 974 aa15.7■□□□□ 0.1
APOB-202ENST00000399256 NACAP1Q9BZK3 213 aa15.7■□□□□ 0.1
APOB-202ENST00000399256 GOLGA6CA6NDK9 693 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms