RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 CUL4BQ13620 913 aa27.02■■□□□ 1.92
CSNK1E-203ENST00000396832 SLC4A8Q2Y0W8 1093 aa27.02■■□□□ 1.92
CSNK1E-203ENST00000396832 CDKAL1Q5VV42 579 aa27.02■■□□□ 1.92
CSNK1E-203ENST00000396832 ADGRA1Q86SQ6 560 aa27.02■■□□□ 1.92
CSNK1E-203ENST00000396832 MYH6P13533 1939 aa27.01■■□□□ 1.92
CSNK1E-203ENST00000396832 SPATA31A3Q5VYP0 1347 aa27.01■■□□□ 1.91
CSNK1E-203ENST00000396832 CDHR2Q9BYE9 1310 aa27.01■■□□□ 1.91
CSNK1E-203ENST00000396832 MAP9Q49MG5 647 aa27.01■■□□□ 1.91
CSNK1E-203ENST00000396832 N4BP3O15049 544 aa27.01■■□□□ 1.91
CSNK1E-203ENST00000396832 EVX2Q03828 476 aa27.01■■□□□ 1.91
CSNK1E-203ENST00000396832 TRIM28Q13263 835 aaKnown RBP27.01■■□□□ 1.91
CSNK1E-203ENST00000396832 STIM1Q13586 685 aa27.01■■□□□ 1.91
CSNK1E-203ENST00000396832 GPATCH11Q8N954 259 aa27.01■■□□□ 1.91
CSNK1E-203ENST00000396832 LPIN2Q92539 896 aa27.01■■□□□ 1.91
CSNK1E-203ENST00000396832 CEP131Q9UPN4 1083 aa27.01■■□□□ 1.91
CSNK1E-203ENST00000396832 ENC1O14682 589 aa27■■□□□ 1.91
CSNK1E-203ENST00000396832 UQCRFS1P1P0C7P4 283 aa27■■□□□ 1.91
CSNK1E-203ENST00000396832 ABHD10Q9NUJ1 306 aa27■■□□□ 1.91
CSNK1E-203ENST00000396832 WTIPA6NIX2 430 aaPredicted RBP27■■□□□ 1.91
CSNK1E-203ENST00000396832 EXOC5O00471 708 aa27■■□□□ 1.91
CSNK1E-203ENST00000396832 GGCXP38435 758 aa27■■□□□ 1.91
CSNK1E-203ENST00000396832 MCTP2Q6DN12 878 aa27■■□□□ 1.91
CSNK1E-203ENST00000396832 CYP26C1Q6V0L0 522 aa27■■□□□ 1.91
CSNK1E-203ENST00000396832 COG1Q8WTW3 980 aa27■■□□□ 1.91
CSNK1E-203ENST00000396832 FAM107BQ9H098 131 aa27■■□□□ 1.91
CSNK1E-203ENST00000396832 ZC3H4Q9UPT8 1303 aaKnown RBP27■■□□□ 1.91
CSNK1E-203ENST00000396832 STARD3NLO95772 234 aa26.99■■□□□ 1.91
CSNK1E-203ENST00000396832 RRAGBQ5VZM2 374 aa26.99■■□□□ 1.91
CSNK1E-203ENST00000396832 HINFPQ9BQA5 517 aa26.99■■□□□ 1.91
CSNK1E-203ENST00000396832 NACAP1Q9BZK3 213 aa26.99■■□□□ 1.91
CSNK1E-203ENST00000396832 GUCA1BQ9UMX6 200 aa26.99■■□□□ 1.91
CSNK1E-203ENST00000396832 EVA1CP58658 441 aa26.99■■□□□ 1.91
CSNK1E-203ENST00000396832 ZNF579Q8NAF0 562 aaKnown RBP26.99■■□□□ 1.91
CSNK1E-203ENST00000396832 HDAC6Q9UBN7 1215 aa26.99■■□□□ 1.91
CSNK1E-203ENST00000396832 PPP1R3GB7ZBB8 358 aa26.98■■□□□ 1.91
CSNK1E-203ENST00000396832 ERLIN2O94905 339 aa26.98■■□□□ 1.91
CSNK1E-203ENST00000396832 MCM3P25205 808 aa26.98■■□□□ 1.91
CSNK1E-203ENST00000396832 KRT31Q15323 416 aa26.98■■□□□ 1.91
CSNK1E-203ENST00000396832 ADAMTS3O15072 1205 aa26.98■■□□□ 1.91
CSNK1E-203ENST00000396832 CCT5P48643 541 aa26.98■■□□□ 1.91
CSNK1E-203ENST00000396832 PPARAQ07869 468 aa26.98■■□□□ 1.91
CSNK1E-203ENST00000396832 TRAPPC11Q7Z392 1133 aa26.98■■□□□ 1.91
CSNK1E-203ENST00000396832 STAG1Q8WVM7 1258 aa26.98■■□□□ 1.91
CSNK1E-203ENST00000396832 SLC5A1P13866 664 aa26.97■■□□□ 1.91
CSNK1E-203ENST00000396832 LIG3P49916 1009 aa26.97■■□□□ 1.91
CSNK1E-203ENST00000396832 CT47A1Q5JQC4 288 aaPredicted RBP26.97■■□□□ 1.91
CSNK1E-203ENST00000396832 MMS19Q96T76 1030 aa26.97■■□□□ 1.91
CSNK1E-203ENST00000396832 ITIH6Q6UXX5 1313 aa26.97■■□□□ 1.91
CSNK1E-203ENST00000396832 ZMYND10O75800 440 aa26.97■■□□□ 1.91
CSNK1E-203ENST00000396832 SWT1Q5T5J6 900 aaKnown RBP26.97■■□□□ 1.91
CSNK1E-203ENST00000396832 STRCP1A6NGW2 1772 aa26.97■■□□□ 1.91
CSNK1E-203ENST00000396832 PDE8AO60658 829 aa26.97■■□□□ 1.91
CSNK1E-203ENST00000396832 SHOX2O60902 331 aaPredicted RBP26.97■■□□□ 1.91
CSNK1E-203ENST00000396832 KRT2P35908 639 aa26.97■■□□□ 1.91
CSNK1E-203ENST00000396832 ALX1Q15699 326 aa26.97■■□□□ 1.91
CSNK1E-203ENST00000396832 PKN1Q16512 942 aa26.97■■□□□ 1.91
CSNK1E-203ENST00000396832 CHP1Q99653 195 aa26.97■■□□□ 1.91
CSNK1E-203ENST00000396832 CRACR2AQ9BSW2 395 aa26.97■■□□□ 1.91
CSNK1E-203ENST00000396832 KAT14Q9H8E8 782 aa26.97■■□□□ 1.91
CSNK1E-203ENST00000396832 MYH2Q9UKX2 1941 aa26.97■■□□□ 1.91
CSNK1E-203ENST00000396832 PTGDRQ13258 359 aa26.96■■□□□ 1.91
CSNK1E-203ENST00000396832 KAT2BQ92831 832 aa26.96■■□□□ 1.91
CSNK1E-203ENST00000396832 SLC4A9Q96Q91 983 aa26.96■■□□□ 1.91
CSNK1E-203ENST00000396832 PARP4Q9UKK3 1724 aaKnown RBP26.96■■□□□ 1.91
CSNK1E-203ENST00000396832 CYP7A1P22680 504 aa26.96■■□□□ 1.91
CSNK1E-203ENST00000396832 MCM7P33993 719 aa26.96■■□□□ 1.91
CSNK1E-203ENST00000396832 FAM76AQ8TAV0 307 aa26.96■■□□□ 1.91
CSNK1E-203ENST00000396832 ZNF512BQ96KM6 892 aaPredicted RBP26.96■■□□□ 1.91
CSNK1E-203ENST00000396832 AATFQ9NY61 560 aaKnown RBP eCLIP26.96■■□□□ 1.91
CSNK1E-203ENST00000396832 GDAQ9Y2T3 454 aa26.96■■□□□ 1.91
CSNK1E-203ENST00000396832 XDHP47989 1333 aa26.96■■□□□ 1.91
CSNK1E-203ENST00000396832 CCDC196A0A1B0GTZ2 297 aa26.95■■□□□ 1.91
CSNK1E-203ENST00000396832 SEMA3EO15041 775 aa26.95■■□□□ 1.91
CSNK1E-203ENST00000396832 NMT2O60551 498 aa26.95■■□□□ 1.91
CSNK1E-203ENST00000396832 SRGAP2O75044 1071 aa26.95■■□□□ 1.91
CSNK1E-203ENST00000396832 VEGFAP15692 232 aaPredicted RBP26.95■■□□□ 1.91
CSNK1E-203ENST00000396832 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.95■■□□□ 1.91
CSNK1E-203ENST00000396832 CADPS2Q86UW7 1296 aa26.95■■□□□ 1.91
CSNK1E-203ENST00000396832 TRIM49BA6NDI0 452 aa26.95■■□□□ 1.9
CSNK1E-203ENST00000396832 IRAK1P51617 712 aa26.95■■□□□ 1.9
CSNK1E-203ENST00000396832 GPIHBP1Q8IV16 184 aa26.95■■□□□ 1.9
CSNK1E-203ENST00000396832 ENAHQ8N8S7 591 aaPredicted RBP26.95■■□□□ 1.9
CSNK1E-203ENST00000396832 CEP89Q96ST8 783 aa26.95■■□□□ 1.9
CSNK1E-203ENST00000396832 PLIN2Q99541 437 aa26.95■■□□□ 1.9
CSNK1E-203ENST00000396832 LRP6O75581 1613 aa26.94■■□□□ 1.9
CSNK1E-203ENST00000396832 TNS2Q63HR2 1409 aa26.94■■□□□ 1.9
CSNK1E-203ENST00000396832 SOS2Q07890 1332 aaPredicted RBP26.94■■□□□ 1.9
CSNK1E-203ENST00000396832 AGPSO00116 658 aa26.94■■□□□ 1.9
CSNK1E-203ENST00000396832 EBAG9O00559 213 aa26.94■■□□□ 1.9
CSNK1E-203ENST00000396832 FGFR2P21802 821 aa26.94■■□□□ 1.9
CSNK1E-203ENST00000396832 TEX2Q8IWB9 1127 aa26.94■■□□□ 1.9
CSNK1E-203ENST00000396832 GSPT2Q8IYD1 628 aaKnown RBP26.94■■□□□ 1.9
CSNK1E-203ENST00000396832 FAM169AQ9Y6X4 670 aa26.94■■□□□ 1.9
CSNK1E-203ENST00000396832 PIK3AP1Q6ZUJ8 805 aa26.94■■□□□ 1.9
CSNK1E-203ENST00000396832 CCDC91Q7Z6B0 441 aa26.94■■□□□ 1.9
CSNK1E-203ENST00000396832 CAPZA3Q96KX2 299 aa26.94■■□□□ 1.9
CSNK1E-203ENST00000396832 KRT9P35527 623 aa26.93■■□□□ 1.9
CSNK1E-203ENST00000396832 REXO2Q9Y3B8 237 aaKnown RBP26.93■■□□□ 1.9
CSNK1E-203ENST00000396832 NKX1-1Q15270 411 aaPredicted RBP26.93■■□□□ 1.9
CSNK1E-203ENST00000396832 DZIP3Q86Y13 1208 aaKnown RBP26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms