RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 GNL3LQ9NVN8 582 aaKnown RBP17.77■□□□□ 0.44
HOXA3-202ENST00000396352 CDC25AP30304 524 aa17.77■□□□□ 0.43
HOXA3-202ENST00000396352 BRD3Q15059 726 aa17.77■□□□□ 0.43
HOXA3-202ENST00000396352 TTF2Q9UNY4 1162 aaKnown RBP17.77■□□□□ 0.43
HOXA3-202ENST00000396352 USP17L12C9JPN9 530 aa17.76■□□□□ 0.43
HOXA3-202ENST00000396352 USP17L21D6R901 530 aa17.76■□□□□ 0.43
HOXA3-202ENST00000396352 MAP2K7O14733 419 aa17.76■□□□□ 0.43
HOXA3-202ENST00000396352 GTPBP6O43824 516 aaPredicted RBP17.76■□□□□ 0.43
HOXA3-202ENST00000396352 ATP6V1AP38606 617 aa17.76■□□□□ 0.43
HOXA3-202ENST00000396352 TRAPPC10P48553 1259 aa17.76■□□□□ 0.43
HOXA3-202ENST00000396352 ST5P78524 1137 aa17.76■□□□□ 0.43
HOXA3-202ENST00000396352 ITPK1Q13572 414 aa17.76■□□□□ 0.43
HOXA3-202ENST00000396352 C3orf67Q6ZVT6 689 aa17.76■□□□□ 0.43
HOXA3-202ENST00000396352 SLC35F6Q8N357 371 aa17.76■□□□□ 0.43
HOXA3-202ENST00000396352 CEP112Q8N8E3 955 aa17.76■□□□□ 0.43
HOXA3-202ENST00000396352 ROBO1Q9Y6N7 1651 aa17.76■□□□□ 0.43
HOXA3-202ENST00000396352 SCG2P13521 617 aa17.76■□□□□ 0.43
HOXA3-202ENST00000396352 ARHGAP25P42331 645 aa17.76■□□□□ 0.43
HOXA3-202ENST00000396352 COPB1P53618 953 aaKnown RBP17.76■□□□□ 0.43
HOXA3-202ENST00000396352 PAK1Q13153 545 aa17.76■□□□□ 0.43
HOXA3-202ENST00000396352 TCP11X2Q5H9J9 407 aa17.76■□□□□ 0.43
HOXA3-202ENST00000396352 TMTC1Q8IUR5 882 aa17.76■□□□□ 0.43
HOXA3-202ENST00000396352 N4BP3O15049 544 aa17.76■□□□□ 0.43
HOXA3-202ENST00000396352 ORC4O43929 436 aa17.76■□□□□ 0.43
HOXA3-202ENST00000396352 MCM7P33993 719 aa17.76■□□□□ 0.43
HOXA3-202ENST00000396352 UBE4AQ14139 1066 aa17.76■□□□□ 0.43
HOXA3-202ENST00000396352 MSANTD4Q8NCY6 345 aa17.76■□□□□ 0.43
HOXA3-202ENST00000396352 VPS16Q9H269 839 aa17.76■□□□□ 0.43
HOXA3-202ENST00000396352 RAB21Q9UL25 225 aa17.76■□□□□ 0.43
HOXA3-202ENST00000396352 CTAGE9A4FU28 777 aa17.75■□□□□ 0.43
HOXA3-202ENST00000396352 TFRCP02786 760 aaKnown RBP17.75■□□□□ 0.43
HOXA3-202ENST00000396352 ZNF658Q5TYW1 1059 aaPredicted RBP17.75■□□□□ 0.43
HOXA3-202ENST00000396352 HNRNPLLQ8WVV9 542 aaKnown RBP17.75■□□□□ 0.43
HOXA3-202ENST00000396352 PNKPQ96T60 521 aa17.75■□□□□ 0.43
HOXA3-202ENST00000396352 TAB2Q9NYJ8 693 aa17.75■□□□□ 0.43
HOXA3-202ENST00000396352 USP5P45974 858 aa17.75■□□□□ 0.43
HOXA3-202ENST00000396352 TUBB2AQ13885 445 aa17.75■□□□□ 0.43
HOXA3-202ENST00000396352 PFKFB3Q16875 520 aaPredicted RBP17.75■□□□□ 0.43
HOXA3-202ENST00000396352 C4orf32Q8N8J7 132 aa17.75■□□□□ 0.43
HOXA3-202ENST00000396352 CTCFLQ8NI51 663 aaPredicted RBP17.75■□□□□ 0.43
HOXA3-202ENST00000396352 NELFBQ8WX92 580 aa17.75■□□□□ 0.43
HOXA3-202ENST00000396352 FAM84BQ96KN1 310 aaPredicted RBP17.75■□□□□ 0.43
HOXA3-202ENST00000396352 TUBB2BQ9BVA1 445 aa17.75■□□□□ 0.43
HOXA3-202ENST00000396352 KCNJ18B7U540 433 aa17.74■□□□□ 0.43
HOXA3-202ENST00000396352 KCNJ12Q14500 433 aa17.74■□□□□ 0.43
HOXA3-202ENST00000396352 NLRP5P59047 1200 aa17.74■□□□□ 0.43
HOXA3-202ENST00000396352 SPAG1Q07617 926 aa17.74■□□□□ 0.43
HOXA3-202ENST00000396352 KIF4BQ2VIQ3 1234 aa17.74■□□□□ 0.43
HOXA3-202ENST00000396352 BEND6Q5SZJ8 279 aaPredicted RBP17.74■□□□□ 0.43
HOXA3-202ENST00000396352 CYP26C1Q6V0L0 522 aa17.74■□□□□ 0.43
HOXA3-202ENST00000396352 ANKRD18AQ8IVF6 992 aa17.74■□□□□ 0.43
HOXA3-202ENST00000396352 NSUN4Q96CB9 384 aaKnown RBP17.74■□□□□ 0.43
HOXA3-202ENST00000396352 PYM1Q9BRP8 204 aaKnown RBP17.74■□□□□ 0.43
HOXA3-202ENST00000396352 CALCOCO1Q9P1Z2 691 aa17.74■□□□□ 0.43
HOXA3-202ENST00000396352 MAST2Q6P0Q8 1798 aa17.74■□□□□ 0.43
HOXA3-202ENST00000396352 LOC102724428A0A0B4J2F2 783 aa17.74■□□□□ 0.43
HOXA3-202ENST00000396352 H3BQF6 201 aa17.74■□□□□ 0.43
HOXA3-202ENST00000396352 SIK1P57059 783 aa17.74■□□□□ 0.43
HOXA3-202ENST00000396352 FAM47AQ5JRC9 791 aa17.74■□□□□ 0.43
HOXA3-202ENST00000396352 BSDC1Q9NW68 430 aaPredicted RBP17.74■□□□□ 0.43
HOXA3-202ENST00000396352 COL5A3P25940 1745 aaPredicted RBP17.73■□□□□ 0.43
HOXA3-202ENST00000396352 RPN1P04843 607 aaKnown RBP17.73■□□□□ 0.43
HOXA3-202ENST00000396352 TRIM14Q14142 442 aa17.73■□□□□ 0.43
HOXA3-202ENST00000396352 CAVIN4Q5BKX8 364 aa17.73■□□□□ 0.43
HOXA3-202ENST00000396352 NEK11Q8NG66 645 aa17.73■□□□□ 0.43
HOXA3-202ENST00000396352 NUP88Q99567 741 aaPredicted RBP17.73■□□□□ 0.43
HOXA3-202ENST00000396352 GDAQ9Y2T3 454 aa17.73■□□□□ 0.43
HOXA3-202ENST00000396352 IRF2BP1Q8IU81 584 aa17.73■□□□□ 0.43
HOXA3-202ENST00000396352 DCP1AQ9NPI6 582 aaPredicted RBP17.73■□□□□ 0.43
HOXA3-202ENST00000396352 MINPP1Q9UNW1 487 aa17.73■□□□□ 0.43
HOXA3-202ENST00000396352 PRCPP42785 496 aa17.73■□□□□ 0.43
HOXA3-202ENST00000396352 HNRNPH2P55795 449 aaKnown RBP17.73■□□□□ 0.43
HOXA3-202ENST00000396352 ERFEQ4G0M1 354 aa17.73■□□□□ 0.43
HOXA3-202ENST00000396352 ARL6IP4Q66PJ3 421 aaKnown RBP17.73■□□□□ 0.43
HOXA3-202ENST00000396352 NAPGQ99747 312 aaPredicted RBP17.73■□□□□ 0.43
HOXA3-202ENST00000396352 FAM205AQ6ZU69 1335 aa17.72■□□□□ 0.43
HOXA3-202ENST00000396352 MECOMQ03112 1051 aa17.72■□□□□ 0.43
HOXA3-202ENST00000396352 RCSD1Q6JBY9 416 aa17.72■□□□□ 0.43
HOXA3-202ENST00000396352 MYO1AQ9UBC5 1043 aa17.72■□□□□ 0.43
HOXA3-202ENST00000396352 POTEB2H3BUK9 544 aa17.72■□□□□ 0.43
HOXA3-202ENST00000396352 KLRK1P26718 216 aa17.72■□□□□ 0.43
HOXA3-202ENST00000396352 LONP1P36776 959 aaKnown RBP17.72■□□□□ 0.43
HOXA3-202ENST00000396352 RMND1Q9NWS8 449 aa17.72■□□□□ 0.43
HOXA3-202ENST00000396352 MAPK8IP1Q9UQF2 711 aa17.72■□□□□ 0.43
HOXA3-202ENST00000396352 REXO2Q9Y3B8 237 aaKnown RBP17.72■□□□□ 0.43
HOXA3-202ENST00000396352 CYP2D6P10635 497 aa17.71■□□□□ 0.43
HOXA3-202ENST00000396352 AMPD2Q01433 879 aa17.71■□□□□ 0.43
HOXA3-202ENST00000396352 SF3B3Q15393 1217 aaKnown RBP17.71■□□□□ 0.43
HOXA3-202ENST00000396352 KRT9P35527 623 aa17.71■□□□□ 0.43
HOXA3-202ENST00000396352 ACSBG1Q96GR2 724 aa17.71■□□□□ 0.43
HOXA3-202ENST00000396352 SLF1Q9BQI6 1058 aa17.71■□□□□ 0.43
HOXA3-202ENST00000396352 MYH1P12882 1939 aa17.71■□□□□ 0.43
HOXA3-202ENST00000396352 CCDC88AQ3V6T2 1871 aa17.71■□□□□ 0.43
HOXA3-202ENST00000396352 WHAMMP3Q1A5X7 153 aa17.71■□□□□ 0.42
HOXA3-202ENST00000396352 FBXO33Q7Z6M2 555 aa17.71■□□□□ 0.42
HOXA3-202ENST00000396352 CHP1Q99653 195 aa17.71■□□□□ 0.42
HOXA3-202ENST00000396352 TRIM49BA6NDI0 452 aa17.7■□□□□ 0.42
HOXA3-202ENST00000396352 GYS2P54840 703 aa17.7■□□□□ 0.42
HOXA3-202ENST00000396352 TUBB4BP68371 445 aa17.7■□□□□ 0.42
HOXA3-202ENST00000396352 NAALADL2Q58DX5 795 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms