RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 LTKP29376 864 aa4.87□□□□□ -1.63
RNU6-550P-201ENST00000391057 SLC7A5Q01650 507 aa4.87□□□□□ -1.63
RNU6-550P-201ENST00000391057 SNW1Q13573 536 aaKnown RBP4.87□□□□□ -1.63
RNU6-550P-201ENST00000391057 LARP1BQ659C4 914 aaKnown RBP4.87□□□□□ -1.63
RNU6-550P-201ENST00000391057 TMC3Q7Z5M5 1100 aa4.87□□□□□ -1.63
RNU6-550P-201ENST00000391057 CREG2Q8IUH2 290 aa4.87□□□□□ -1.63
RNU6-550P-201ENST00000391057 C7orf61Q8IZ16 206 aa4.87□□□□□ -1.63
RNU6-550P-201ENST00000391057 PI4K2BQ8TCG2 481 aa4.87□□□□□ -1.63
RNU6-550P-201ENST00000391057 SYTL5Q8TDW5 730 aaPredicted RBP4.87□□□□□ -1.63
RNU6-550P-201ENST00000391057 HDAC8Q9BY41 377 aa4.87□□□□□ -1.63
RNU6-550P-201ENST00000391057 CARS2Q9HA77 564 aaKnown RBP4.87□□□□□ -1.63
RNU6-550P-201ENST00000391057 LMCD1Q9NZU5 365 aa4.87□□□□□ -1.63
RNU6-550P-201ENST00000391057 WASH4PA8MWX3 477 aa4.86□□□□□ -1.63
RNU6-550P-201ENST00000391057 SIGLEC6O43699 453 aa4.86□□□□□ -1.63
RNU6-550P-201ENST00000391057 STK10O94804 968 aaKnown RBP4.86□□□□□ -1.63
RNU6-550P-201ENST00000391057 PRAMEF1O95521 474 aa4.86□□□□□ -1.63
RNU6-550P-201ENST00000391057 ATP2B1P20020 1258 aa4.86□□□□□ -1.63
RNU6-550P-201ENST00000391057 SF3A1Q15459 793 aaKnown RBP4.86□□□□□ -1.63
RNU6-550P-201ENST00000391057 GAB4Q2WGN9 574 aa4.86□□□□□ -1.63
RNU6-550P-201ENST00000391057 AXDND1Q5T1B0 1012 aaPredicted RBP4.86□□□□□ -1.63
RNU6-550P-201ENST00000391057 DCAF15Q66K64 600 aa4.86□□□□□ -1.63
RNU6-550P-201ENST00000391057 VHLLQ6RSH7 139 aa4.86□□□□□ -1.63
RNU6-550P-201ENST00000391057 ABI1Q8IZP0 508 aa4.86□□□□□ -1.63
RNU6-550P-201ENST00000391057 CHST7Q9NS84 486 aa4.86□□□□□ -1.63
RNU6-550P-201ENST00000391057 GFOD1Q9NXC2 390 aa4.86□□□□□ -1.63
RNU6-550P-201ENST00000391057 PRR13Q9NZ81 148 aa4.86□□□□□ -1.63
RNU6-550P-201ENST00000391057 PCDHB10Q9UN67 800 aa4.86□□□□□ -1.63
RNU6-550P-201ENST00000391057 OAS3Q9Y6K5 1087 aaKnown RBP4.86□□□□□ -1.63
RNU6-550P-201ENST00000391057 MEIS1O00470 390 aa4.85□□□□□ -1.63
RNU6-550P-201ENST00000391057 SHOXO15266 292 aa4.85□□□□□ -1.63
RNU6-550P-201ENST00000391057 ESR1P03372 595 aa4.85□□□□□ -1.63
RNU6-550P-201ENST00000391057 EGR3Q06889 387 aa4.85□□□□□ -1.63
RNU6-550P-201ENST00000391057 TCEAL1Q15170 157 aa4.85□□□□□ -1.63
RNU6-550P-201ENST00000391057 HEATR6Q6AI08 1181 aaKnown RBP4.85□□□□□ -1.63
RNU6-550P-201ENST00000391057 SLC23A3Q6PIS1 610 aa4.85□□□□□ -1.63
RNU6-550P-201ENST00000391057 ANKS3Q6ZW76 656 aa4.85□□□□□ -1.63
RNU6-550P-201ENST00000391057 ZNF655Q8N720 491 aaPredicted RBP4.85□□□□□ -1.63
RNU6-550P-201ENST00000391057 DAGLBQ8NCG7 672 aa4.85□□□□□ -1.63
RNU6-550P-201ENST00000391057 HNRNPLLQ8WVV9 542 aaKnown RBP4.85□□□□□ -1.63
RNU6-550P-201ENST00000391057 KLHL6Q8WZ60 621 aa4.85□□□□□ -1.63
RNU6-550P-201ENST00000391057 HAUS7Q99871 368 aa4.85□□□□□ -1.63
RNU6-550P-201ENST00000391057 DSCC1Q9BVC3 393 aa4.85□□□□□ -1.63
RNU6-550P-201ENST00000391057 GBP3Q9H0R5 595 aa4.85□□□□□ -1.63
RNU6-550P-201ENST00000391057 GP6Q9HCN6 339 aa4.85□□□□□ -1.63
RNU6-550P-201ENST00000391057 PRDM7Q9NQW5 492 aa4.85□□□□□ -1.63
RNU6-550P-201ENST00000391057 PPP1R1BQ9UD71 204 aaPredicted RBP4.85□□□□□ -1.63
RNU6-550P-201ENST00000391057 ZNF451Q9Y4E5 1061 aa4.85□□□□□ -1.63
RNU6-550P-201ENST00000391057 PCDHA11Q9Y5I1 949 aa4.85□□□□□ -1.63
RNU6-550P-201ENST00000391057 SSU72P8A0A1W2PR75 194 aa4.84□□□□□ -1.63
RNU6-550P-201ENST00000391057 ITGA4P13612 1032 aa4.84□□□□□ -1.63
RNU6-550P-201ENST00000391057 CD247P20963 164 aa4.84□□□□□ -1.63
RNU6-550P-201ENST00000391057 GTF2F1P35269 517 aaKnown RBP eCLIP4.84□□□□□ -1.63
RNU6-550P-201ENST00000391057 NCAPHQ15003 741 aa4.84□□□□□ -1.63
RNU6-550P-201ENST00000391057 FXNQ16595 210 aa4.84□□□□□ -1.63
RNU6-550P-201ENST00000391057 ZNF792Q3KQV3 632 aa4.84□□□□□ -1.63
RNU6-550P-201ENST00000391057 ANKRD39Q53RE8 183 aa4.84□□□□□ -1.63
RNU6-550P-201ENST00000391057 NOL9Q5SY16 702 aaKnown RBP4.84□□□□□ -1.63
RNU6-550P-201ENST00000391057 KIAA1211LQ6NV74 962 aa4.84□□□□□ -1.63
RNU6-550P-201ENST00000391057 CKAP2LQ8IYA6 745 aa4.84□□□□□ -1.63
RNU6-550P-201ENST00000391057 SYTL4Q96C24 671 aaPredicted RBP4.84□□□□□ -1.63
RNU6-550P-201ENST00000391057 TCTN2Q96GX1 697 aa4.84□□□□□ -1.63
RNU6-550P-201ENST00000391057 RC3H2Q9HBD1 1191 aaKnown RBP4.84□□□□□ -1.63
RNU6-550P-201ENST00000391057 MBNL3Q9NUK0 354 aaKnown RBP4.84□□□□□ -1.63
RNU6-550P-201ENST00000391057 SLAMF8Q9P0V8 285 aa4.84□□□□□ -1.63
RNU6-550P-201ENST00000391057 B2RBV5 119 aa4.83□□□□□ -1.64
RNU6-550P-201ENST00000391057 CBFA2T2O43439 604 aa4.83□□□□□ -1.64
RNU6-550P-201ENST00000391057 EPHX1P07099 455 aa4.83□□□□□ -1.64
RNU6-550P-201ENST00000391057 RNASE1P07998 156 aaKnown RBP4.83□□□□□ -1.64
RNU6-550P-201ENST00000391057 NAT2P11245 290 aa4.83□□□□□ -1.64
RNU6-550P-201ENST00000391057 PCBP3P57721 371 aaKnown RBP4.83□□□□□ -1.64
RNU6-550P-201ENST00000391057 C6orf15Q6UXA7 325 aaPredicted RBP4.83□□□□□ -1.64
RNU6-550P-201ENST00000391057 RNF111Q6ZNA4 994 aa4.83□□□□□ -1.64
RNU6-550P-201ENST00000391057 ADAT2Q7Z6V5 191 aaKnown RBP4.83□□□□□ -1.64
RNU6-550P-201ENST00000391057 FAM178BQ8IXR5 827 aa4.83□□□□□ -1.64
RNU6-550P-201ENST00000391057 SREK1Q8WXA9 508 aaKnown RBP4.83□□□□□ -1.64
RNU6-550P-201ENST00000391057 CCDC120Q96HB5 630 aa4.83□□□□□ -1.64
RNU6-550P-201ENST00000391057 ALPK1Q96QP1 1244 aa4.83□□□□□ -1.64
RNU6-550P-201ENST00000391057 TRIM55Q9BYV6 548 aa4.83□□□□□ -1.64
RNU6-550P-201ENST00000391057 KLHL25Q9H0H3 589 aa4.83□□□□□ -1.64
RNU6-550P-201ENST00000391057 WHRNQ9P202 907 aa4.83□□□□□ -1.64
RNU6-550P-201ENST00000391057 ADAMTS6Q9UKP5 1117 aa4.83□□□□□ -1.64
RNU6-550P-201ENST00000391057 MINPP1Q9UNW1 487 aa4.83□□□□□ -1.64
RNU6-550P-201ENST00000391057 FHOD1Q9Y613 1164 aa4.83□□□□□ -1.64
RNU6-550P-201ENST00000391057 ANKRD34BA5PLL1 514 aa4.82□□□□□ -1.64
RNU6-550P-201ENST00000391057 PPM1BO75688 479 aa4.82□□□□□ -1.64
RNU6-550P-201ENST00000391057 DDAH1O94760 285 aa4.82□□□□□ -1.64
RNU6-550P-201ENST00000391057 GSNP06396 782 aa4.82□□□□□ -1.64
RNU6-550P-201ENST00000391057 SYPP08247 313 aa4.82□□□□□ -1.64
RNU6-550P-201ENST00000391057 IRAK1P51617 712 aa4.82□□□□□ -1.64
RNU6-550P-201ENST00000391057 ZNF445P59923 1031 aa4.82□□□□□ -1.64
RNU6-550P-201ENST00000391057 TEKQ02763 1124 aa4.82□□□□□ -1.64
RNU6-550P-201ENST00000391057 CWF19L1Q69YN2 538 aaKnown RBP4.82□□□□□ -1.64
RNU6-550P-201ENST00000391057 CRTC3Q6UUV7 619 aa4.82□□□□□ -1.64
RNU6-550P-201ENST00000391057 FIBCD1Q8N539 461 aa4.82□□□□□ -1.64
RNU6-550P-201ENST00000391057 USHBP1Q8N6Y0 703 aa4.82□□□□□ -1.64
RNU6-550P-201ENST00000391057 LRRN4CLQ8ND94 238 aa4.82□□□□□ -1.64
RNU6-550P-201ENST00000391057 DHX38Q92620 1227 aaKnown RBP4.82□□□□□ -1.64
RNU6-550P-201ENST00000391057 BRF1Q92994 677 aa4.82□□□□□ -1.64
RNU6-550P-201ENST00000391057 ARMC5Q96C12 935 aa4.82□□□□□ -1.64
RNU6-550P-201ENST00000391057 FGD4Q96M96 766 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms