RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 PNPLA6Q8IY17 1366 aa16.52■□□□□ 0.23
SNPH-202ENST00000381873 HEG1Q9ULI3 1381 aa16.52■□□□□ 0.23
SNPH-202ENST00000381873 KRT19P08727 400 aa16.51■□□□□ 0.23
SNPH-202ENST00000381873 ERCC3P19447 782 aa16.51■□□□□ 0.23
SNPH-202ENST00000381873 ADD1P35611 737 aaKnown RBP16.51■□□□□ 0.23
SNPH-202ENST00000381873 MIER3Q7Z3K6 550 aa16.51■□□□□ 0.23
SNPH-202ENST00000381873 UBLCP1Q8WVY7 318 aaPredicted RBP16.51■□□□□ 0.23
SNPH-202ENST00000381873 PAGR1Q9BTK6 254 aa16.51■□□□□ 0.23
SNPH-202ENST00000381873 TRIM7Q9C029 511 aa16.51■□□□□ 0.23
SNPH-202ENST00000381873 PNMA2Q9UL42 364 aa16.51■□□□□ 0.23
SNPH-202ENST00000381873 FGAP02671 866 aa16.51■□□□□ 0.23
SNPH-202ENST00000381873 UTP14CQ5TAP6 766 aaKnown RBP16.51■□□□□ 0.23
SNPH-202ENST00000381873 NELFBQ8WX92 580 aa16.51■□□□□ 0.23
SNPH-202ENST00000381873 TESPA1A2RU30 521 aaPredicted RBP16.51■□□□□ 0.23
SNPH-202ENST00000381873 ARHGAP6O43182 974 aa16.51■□□□□ 0.23
SNPH-202ENST00000381873 NOSTRINQ8IVI9 506 aa16.51■□□□□ 0.23
SNPH-202ENST00000381873 SEC62Q99442 399 aaKnown RBP16.51■□□□□ 0.23
SNPH-202ENST00000381873 PCDHA12Q9UN75 941 aa16.51■□□□□ 0.23
SNPH-202ENST00000381873 KDM3AQ9Y4C1 1321 aa16.51■□□□□ 0.23
SNPH-202ENST00000381873 DEPTORQ8TB45 409 aa16.51■□□□□ 0.23
SNPH-202ENST00000381873 PTPRUQ92729 1446 aa16.51■□□□□ 0.23
SNPH-202ENST00000381873 TNNI1P19237 187 aa16.5■□□□□ 0.23
SNPH-202ENST00000381873 ICA1Q05084 483 aa16.5■□□□□ 0.23
SNPH-202ENST00000381873 ADALQ6DHV7 355 aa16.5■□□□□ 0.23
SNPH-202ENST00000381873 SECISBP2LQ93073 1101 aaKnown RBP16.5■□□□□ 0.23
SNPH-202ENST00000381873 NUCKS1Q9H1E3 243 aaKnown RBP16.5■□□□□ 0.23
SNPH-202ENST00000381873 MLXIPQ9HAP2 919 aa16.5■□□□□ 0.23
SNPH-202ENST00000381873 NCOA3Q9Y6Q9 1424 aa16.5■□□□□ 0.23
SNPH-202ENST00000381873 PSMC4P43686 418 aa16.5■□□□□ 0.23
SNPH-202ENST00000381873 RNASE9P60153 205 aaKnown RBP16.5■□□□□ 0.23
SNPH-202ENST00000381873 UBE3CQ15386 1083 aa16.5■□□□□ 0.23
SNPH-202ENST00000381873 CFAP157Q5JU67 520 aa16.5■□□□□ 0.23
SNPH-202ENST00000381873 IMPACTQ9P2X3 320 aa16.5■□□□□ 0.23
SNPH-202ENST00000381873 ASAP1Q9ULH1 1129 aa16.5■□□□□ 0.23
SNPH-202ENST00000381873 PCDHB13Q9Y5F0 798 aa16.5■□□□□ 0.23
SNPH-202ENST00000381873 NRXN1Q9ULB1 1477 aa16.5■□□□□ 0.23
SNPH-202ENST00000381873 ZNF804BA4D1E1 1349 aa16.5■□□□□ 0.23
SNPH-202ENST00000381873 BTDP43251 543 aa16.5■□□□□ 0.23
SNPH-202ENST00000381873 MNAT1P51948 309 aa16.5■□□□□ 0.23
SNPH-202ENST00000381873 PABPC4Q13310 644 aaKnown RBP eCLIP16.5■□□□□ 0.23
SNPH-202ENST00000381873 CLUL1Q15846 466 aa16.5■□□□□ 0.23
SNPH-202ENST00000381873 NACA2Q9H009 215 aa16.5■□□□□ 0.23
SNPH-202ENST00000381873 GREM2Q9H772 168 aa16.5■□□□□ 0.23
SNPH-202ENST00000381873 ODF2LQ9ULJ1 636 aa16.5■□□□□ 0.23
SNPH-202ENST00000381873 STK10O94804 968 aaKnown RBP16.5■□□□□ 0.23
SNPH-202ENST00000381873 ZNF75DP51815 510 aa16.5■□□□□ 0.23
SNPH-202ENST00000381873 PPP1R21Q6ZMI0 780 aa16.5■□□□□ 0.23
SNPH-202ENST00000381873 CCDC121Q6ZUS5 278 aa16.5■□□□□ 0.23
SNPH-202ENST00000381873 GABPB2Q8TAK5 448 aaPredicted RBP16.5■□□□□ 0.23
SNPH-202ENST00000381873 PTPRMP28827 1452 aa16.5■□□□□ 0.23
SNPH-202ENST00000381873 CRKLP46109 303 aaKnown RBP16.49■□□□□ 0.23
SNPH-202ENST00000381873 UAP1Q16222 522 aaPredicted RBP16.49■□□□□ 0.23
SNPH-202ENST00000381873 HDXQ7Z353 690 aa16.49■□□□□ 0.23
SNPH-202ENST00000381873 SULF1Q8IWU6 871 aa16.49■□□□□ 0.23
SNPH-202ENST00000381873 SERTAD1Q9UHV2 236 aa16.49■□□□□ 0.23
SNPH-202ENST00000381873 TCP10L2B9ZVM9 353 aa16.49■□□□□ 0.23
SNPH-202ENST00000381873 FBXO11Q86XK2 927 aa16.49■□□□□ 0.23
SNPH-202ENST00000381873 RDH13Q8NBN7 331 aa16.49■□□□□ 0.23
SNPH-202ENST00000381873 BLZF1Q9H2G9 400 aa16.49■□□□□ 0.23
SNPH-202ENST00000381873 QTRT2Q9H974 415 aaKnown RBP16.49■□□□□ 0.23
SNPH-202ENST00000381873 VPS18Q9P253 973 aa16.49■□□□□ 0.23
SNPH-202ENST00000381873 PIK3C2BO00750 1634 aa16.49■□□□□ 0.23
SNPH-202ENST00000381873 SPATA31D1Q6ZQQ2 1576 aa16.49■□□□□ 0.23
SNPH-202ENST00000381873 PTH1RQ03431 593 aa16.49■□□□□ 0.23
SNPH-202ENST00000381873 MAPK8IP2Q13387 824 aaPredicted RBP16.49■□□□□ 0.23
SNPH-202ENST00000381873 SAMD15Q9P1V8 674 aa16.49■□□□□ 0.23
SNPH-202ENST00000381873 BRD1O95696 1058 aa16.49■□□□□ 0.23
SNPH-202ENST00000381873 PCP11498 1178 aaKnown RBP16.49■□□□□ 0.23
SNPH-202ENST00000381873 SETDB1Q15047 1291 aa16.49■□□□□ 0.23
SNPH-202ENST00000381873 CCDC125Q86Z20 511 aa16.49■□□□□ 0.23
SNPH-202ENST00000381873 SMC1BQ8NDV3 1235 aa16.49■□□□□ 0.23
SNPH-202ENST00000381873 ERO1AQ96HE7 468 aa16.49■□□□□ 0.23
SNPH-202ENST00000381873 POLR2MP0CAP2 368 aa16.48■□□□□ 0.23
SNPH-202ENST00000381873 ATP5DP30049 168 aa16.48■□□□□ 0.23
SNPH-202ENST00000381873 PRR16Q569H4 304 aa16.48■□□□□ 0.23
SNPH-202ENST00000381873 PROCA1Q8NCQ7 364 aaPredicted RBP16.48■□□□□ 0.23
SNPH-202ENST00000381873 ZFP91Q96JP5 570 aaPredicted RBP16.48■□□□□ 0.23
SNPH-202ENST00000381873 ZBTB1Q9Y2K1 713 aa16.48■□□□□ 0.23
SNPH-202ENST00000381873 SEMA3EO15041 775 aa16.48■□□□□ 0.23
SNPH-202ENST00000381873 CEP104O60308 925 aa16.48■□□□□ 0.23
SNPH-202ENST00000381873 SCG2P13521 617 aa16.48■□□□□ 0.23
SNPH-202ENST00000381873 PHKA1P46020 1223 aa16.48■□□□□ 0.23
SNPH-202ENST00000381873 ARHGEF16Q5VV41 709 aa16.48■□□□□ 0.23
SNPH-202ENST00000381873 SLFN13Q68D06 897 aa16.48■□□□□ 0.23
SNPH-202ENST00000381873 LRRC47Q8N1G4 583 aaKnown RBP16.48■□□□□ 0.23
SNPH-202ENST00000381873 CCDC17Q96LX7 622 aa16.48■□□□□ 0.23
SNPH-202ENST00000381873 LARSQ9P2J5 1176 aaKnown RBP16.48■□□□□ 0.23
SNPH-202ENST00000381873 TECPR2O15040 1411 aa16.48■□□□□ 0.23
SNPH-202ENST00000381873 PRPF6O94906 941 aaKnown RBP16.48■□□□□ 0.23
SNPH-202ENST00000381873 GNA14O95837 355 aa16.48■□□□□ 0.23
SNPH-202ENST00000381873 SFMBT2Q5VUG0 894 aa16.48■□□□□ 0.23
SNPH-202ENST00000381873 GALNT17Q6IS24 598 aa16.48■□□□□ 0.23
SNPH-202ENST00000381873 ARHGAP27Q6ZUM4 889 aa16.48■□□□□ 0.23
SNPH-202ENST00000381873 CMTR1Q8N1G2 835 aaKnown RBP16.48■□□□□ 0.23
SNPH-202ENST00000381873 LEMD3Q9Y2U8 911 aa16.48■□□□□ 0.23
SNPH-202ENST00000381873 C1orf167Q5SNV9 1468 aa16.48■□□□□ 0.23
SNPH-202ENST00000381873 NEK8Q86SG6 692 aa16.48■□□□□ 0.23
SNPH-202ENST00000381873 GPBP1Q86WP2 473 aa16.48■□□□□ 0.23
SNPH-202ENST00000381873 TRMT44Q8IYL2 757 aaKnown RBP16.48■□□□□ 0.23
SNPH-202ENST00000381873 ANKRD35Q8N283 1001 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms