RNA–Protein interactions for RNA: ENST00000381077.9

PUDP-201, Transcript of pseudouridine 5'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUDP, Length 2,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-201ENST00000381077 ZNF444Q8N0Y2 327 aaPredicted RBP14.35□□□□□ -0.11
PUDP-201ENST00000381077 ZNF713Q8N859 430 aaPredicted RBP14.35□□□□□ -0.11
PUDP-201ENST00000381077 ZNF397Q8NF99 534 aaPredicted RBP14.35□□□□□ -0.11
PUDP-201ENST00000381077 SPZ1Q9BXG8 430 aa14.35□□□□□ -0.11
PUDP-201ENST00000381077 CUEDC2Q9H467 287 aa14.35□□□□□ -0.11
PUDP-201ENST00000381077 C10orf71Q711Q0 1435 aa14.35□□□□□ -0.11
PUDP-201ENST00000381077 VWA3AA6NCI4 1184 aa14.35□□□□□ -0.11
PUDP-201ENST00000381077 PALM3A6NDB9 673 aaPredicted RBP14.35□□□□□ -0.11
PUDP-201ENST00000381077 HOXA7P31268 230 aaPredicted RBP14.35□□□□□ -0.11
PUDP-201ENST00000381077 TRIM14Q14142 442 aa14.35□□□□□ -0.11
PUDP-201ENST00000381077 PPP4R3BQ5MIZ7 849 aa14.35□□□□□ -0.11
PUDP-201ENST00000381077 PDXDC2PQ6P474 469 aa14.35□□□□□ -0.11
PUDP-201ENST00000381077 TXNRD3Q86VQ6 643 aa14.35□□□□□ -0.11
PUDP-201ENST00000381077 TC2NQ8N9U0 490 aa14.35□□□□□ -0.11
PUDP-201ENST00000381077 IL17RBQ9NRM6 502 aa14.35□□□□□ -0.11
PUDP-201ENST00000381077 PODXL2Q9NZ53 605 aa14.35□□□□□ -0.11
PUDP-201ENST00000381077 RWDD2AQ9UIY3 292 aa14.35□□□□□ -0.11
PUDP-201ENST00000381077 GPR75-ASB3A0A0A6YYF3 556 aa14.34□□□□□ -0.11
PUDP-201ENST00000381077 TMEM232C9JQI7 657 aa14.34□□□□□ -0.11
PUDP-201ENST00000381077 USP17L8P0C7I0 530 aa14.34□□□□□ -0.11
PUDP-201ENST00000381077 TSPY3P0CV98 308 aa14.34□□□□□ -0.11
PUDP-201ENST00000381077 TSPY8P0CW00 308 aa14.34□□□□□ -0.11
PUDP-201ENST00000381077 CYP2D6P10635 497 aa14.34□□□□□ -0.11
PUDP-201ENST00000381077 PBX1P40424 430 aa14.34□□□□□ -0.11
PUDP-201ENST00000381077 NOVP48745 357 aa14.34□□□□□ -0.11
PUDP-201ENST00000381077 NFIXQ14938 502 aa14.34□□□□□ -0.11
PUDP-201ENST00000381077 APTXQ7Z2E3 356 aaKnown RBP14.34□□□□□ -0.11
PUDP-201ENST00000381077 HOMER1Q86YM7 354 aa14.34□□□□□ -0.11
PUDP-201ENST00000381077 REXO1L1PQ8IX06 675 aa14.34□□□□□ -0.11
PUDP-201ENST00000381077 C4orf32Q8N8J7 132 aa14.34□□□□□ -0.11
PUDP-201ENST00000381077 ANKRD20A12PQ8NF67 263 aa14.34□□□□□ -0.11
PUDP-201ENST00000381077 AK8Q96MA6 479 aa14.34□□□□□ -0.11
PUDP-201ENST00000381077 MED15Q96RN5 788 aa14.34□□□□□ -0.11
PUDP-201ENST00000381077 RTFDC1Q9BY42 306 aaPredicted RBP14.34□□□□□ -0.11
PUDP-201ENST00000381077 CCSER1Q9C0I3 900 aa14.34□□□□□ -0.11
PUDP-201ENST00000381077 BARHL2Q9NY43 387 aa14.34□□□□□ -0.11
PUDP-201ENST00000381077 ADD3Q9UEY8 706 aaKnown RBP14.34□□□□□ -0.11
PUDP-201ENST00000381077 MAD2L2Q9UI95 211 aa14.34□□□□□ -0.11
PUDP-201ENST00000381077 ZNF215Q9UL58 517 aaPredicted RBP14.34□□□□□ -0.11
PUDP-201ENST00000381077 SUGT1Q9Y2Z0 365 aa14.34□□□□□ -0.11
PUDP-201ENST00000381077 PPP1R3GB7ZBB8 358 aa14.33□□□□□ -0.11
PUDP-201ENST00000381077 AKR1B15C9JRZ8 316 aaPredicted RBP14.33□□□□□ -0.11
PUDP-201ENST00000381077 ONECUT3O60422 494 aaPredicted RBP14.33□□□□□ -0.11
PUDP-201ENST00000381077 NMT2O60551 498 aa14.33□□□□□ -0.11
PUDP-201ENST00000381077 BBOX1O75936 387 aa14.33□□□□□ -0.11
PUDP-201ENST00000381077 TPM1P09493 284 aa14.33□□□□□ -0.11
PUDP-201ENST00000381077 FECHP22830 423 aa14.33□□□□□ -0.11
PUDP-201ENST00000381077 PPP1R2P41236 205 aa14.33□□□□□ -0.11
PUDP-201ENST00000381077 KCNB1Q14721 858 aa14.33□□□□□ -0.11
PUDP-201ENST00000381077 ZNF658Q5TYW1 1059 aaPredicted RBP14.33□□□□□ -0.11
PUDP-201ENST00000381077 C16orf86Q6ZW13 317 aa14.33□□□□□ -0.11
PUDP-201ENST00000381077 DNAI1Q9UI46 699 aa14.33□□□□□ -0.11
PUDP-201ENST00000381077 USP21Q9UK80 565 aa14.33□□□□□ -0.11
PUDP-201ENST00000381077 PPP2R2CQ9Y2T4 447 aa14.33□□□□□ -0.11
PUDP-201ENST00000381077 CCDC194A0A1B0GVG4 234 aa14.33□□□□□ -0.12
PUDP-201ENST00000381077 ST5P78524 1137 aa14.33□□□□□ -0.12
PUDP-201ENST00000381077 TRIM65Q6PJ69 517 aa14.33□□□□□ -0.12
PUDP-201ENST00000381077 SYT10Q6XYQ8 523 aa14.33□□□□□ -0.12
PUDP-201ENST00000381077 CNGA4Q8IV77 575 aa14.33□□□□□ -0.12
PUDP-201ENST00000381077 GRAMD1CQ8IYS0 662 aa14.33□□□□□ -0.12
PUDP-201ENST00000381077 NEDD1Q8NHV4 660 aa14.33□□□□□ -0.12
PUDP-201ENST00000381077 SH3RF3Q8TEJ3 882 aaPredicted RBP14.33□□□□□ -0.12
PUDP-201ENST00000381077 RPGRQ92834 1020 aaKnown RBP14.33□□□□□ -0.12
PUDP-201ENST00000381077 SAMSN1Q9NSI8 373 aaKnown RBP14.33□□□□□ -0.12
PUDP-201ENST00000381077 OGFRQ9NZT2 677 aa14.33□□□□□ -0.12
PUDP-201ENST00000381077 LIMA1Q9UHB6 759 aaKnown RBP14.33□□□□□ -0.12
PUDP-201ENST00000381077 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.33□□□□□ -0.12
PUDP-201ENST00000381077 PLIN4Q96Q06 1357 aa14.33□□□□□ -0.12
PUDP-201ENST00000381077 CDK5RAP2Q96SN8 1893 aa14.32□□□□□ -0.12
PUDP-201ENST00000381077 HOXA10P31260 410 aaPredicted RBP14.32□□□□□ -0.12
PUDP-201ENST00000381077 AFMP43652 599 aa14.32□□□□□ -0.12
PUDP-201ENST00000381077 DTHD1Q6ZMT9 781 aa14.32□□□□□ -0.12
PUDP-201ENST00000381077 RBM17Q96I25 401 aaKnown RBP14.32□□□□□ -0.12
PUDP-201ENST00000381077 ZMYND12Q9H0C1 365 aa14.32□□□□□ -0.12
PUDP-201ENST00000381077 CD209Q9NNX6 404 aa14.32□□□□□ -0.12
PUDP-201ENST00000381077 LRRC37AA6NMS7 1700 aa14.32□□□□□ -0.12
PUDP-201ENST00000381077 FOCADQ5VW36 1801 aa14.32□□□□□ -0.12
PUDP-201ENST00000381077 GAKO14976 1311 aa14.32□□□□□ -0.12
PUDP-201ENST00000381077 UBR3Q6ZT12 1888 aa14.32□□□□□ -0.12
PUDP-201ENST00000381077 hCG_1642624A0A1W2PR95 340 aa14.32□□□□□ -0.12
PUDP-201ENST00000381077 ESYT2A0FGR8 921 aa14.32□□□□□ -0.12
PUDP-201ENST00000381077 WNT7AO00755 349 aa14.32□□□□□ -0.12
PUDP-201ENST00000381077 GNA11P29992 359 aa14.32□□□□□ -0.12
PUDP-201ENST00000381077 KCNQ4P56696 695 aa14.32□□□□□ -0.12
PUDP-201ENST00000381077 PIP4K2BP78356 416 aa14.32□□□□□ -0.12
PUDP-201ENST00000381077 TUBB2AQ13885 445 aa14.32□□□□□ -0.12
PUDP-201ENST00000381077 ZNF827Q17R98 1081 aa14.32□□□□□ -0.12
PUDP-201ENST00000381077 KRT25Q7Z3Z0 450 aa14.32□□□□□ -0.12
PUDP-201ENST00000381077 TUBB2BQ9BVA1 445 aa14.32□□□□□ -0.12
PUDP-201ENST00000381077 DISC1Q9NRI5 854 aa14.32□□□□□ -0.12
PUDP-201ENST00000381077 GGA1Q9UJY5 639 aa14.32□□□□□ -0.12
PUDP-201ENST00000381077 RASA1P20936 1047 aa14.31□□□□□ -0.12
PUDP-201ENST00000381077 MCM7P33993 719 aa14.31□□□□□ -0.12
PUDP-201ENST00000381077 PAK1Q13153 545 aa14.31□□□□□ -0.12
PUDP-201ENST00000381077 PRR5LQ6MZQ0 368 aa14.31□□□□□ -0.12
PUDP-201ENST00000381077 PPFIBP1Q86W92 1011 aa14.31□□□□□ -0.12
PUDP-201ENST00000381077 TRMT44Q8IYL2 757 aaKnown RBP14.31□□□□□ -0.12
PUDP-201ENST00000381077 FAM205AQ6ZU69 1335 aa14.31□□□□□ -0.12
PUDP-201ENST00000381077 MYO3BQ8WXR4 1341 aa14.31□□□□□ -0.12
PUDP-201ENST00000381077 H7C1D1 291 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms