RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 KIFAP3Q92845 792 aa9.44□□□□□ -0.9
NHLRC3-201ENST00000379599 C19orf44Q9H6X5 657 aa9.44□□□□□ -0.9
NHLRC3-201ENST00000379599 HELLSQ9NRZ9 838 aa9.44□□□□□ -0.9
NHLRC3-201ENST00000379599 TBC1D7Q9P0N9 293 aa9.44□□□□□ -0.9
NHLRC3-201ENST00000379599 USH1CQ9Y6N9 552 aa9.44□□□□□ -0.9
NHLRC3-201ENST00000379599 CCT8L1PA6NM43 557 aa9.43□□□□□ -0.9
NHLRC3-201ENST00000379599 SURF6O75683 361 aaKnown RBP9.43□□□□□ -0.9
NHLRC3-201ENST00000379599 GFPT2O94808 682 aa9.43□□□□□ -0.9
NHLRC3-201ENST00000379599 RPS6KB1P23443 525 aa9.43□□□□□ -0.9
NHLRC3-201ENST00000379599 RPL13P26373 211 aaKnown RBP9.43□□□□□ -0.9
NHLRC3-201ENST00000379599 BPIFB4P59827 614 aa9.43□□□□□ -0.9
NHLRC3-201ENST00000379599 NFE2L2Q16236 605 aa9.43□□□□□ -0.9
NHLRC3-201ENST00000379599 PPP4R3AQ6IN85 833 aa9.43□□□□□ -0.9
NHLRC3-201ENST00000379599 P3H4Q92791 437 aa9.43□□□□□ -0.9
NHLRC3-201ENST00000379599 ATP6V1G3Q96LB4 118 aa9.43□□□□□ -0.9
NHLRC3-201ENST00000379599 VCXQ9H320 206 aa9.43□□□□□ -0.9
NHLRC3-201ENST00000379599 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.43□□□□□ -0.9
NHLRC3-201ENST00000379599 MAP3K5Q99683 1374 aa9.43□□□□□ -0.9
NHLRC3-201ENST00000379599 UBN2Q6ZU65 1347 aa9.43□□□□□ -0.9
NHLRC3-201ENST00000379599 GPR75-ASB3A0A0A6YYF3 556 aa9.43□□□□□ -0.9
NHLRC3-201ENST00000379599 TEX33O43247 280 aa9.43□□□□□ -0.9
NHLRC3-201ENST00000379599 HNRNPCP07910 306 aaKnown RBP eCLIP9.43□□□□□ -0.9
NHLRC3-201ENST00000379599 GHRP10912 638 aa9.43□□□□□ -0.9
NHLRC3-201ENST00000379599 PFKFB1P16118 471 aa9.43□□□□□ -0.9
NHLRC3-201ENST00000379599 CASP14P31944 242 aa9.43□□□□□ -0.9
NHLRC3-201ENST00000379599 NECTIN1Q15223 517 aa9.43□□□□□ -0.9
NHLRC3-201ENST00000379599 IFT81Q8WYA0 676 aa9.43□□□□□ -0.9
NHLRC3-201ENST00000379599 NLRP3Q96P20 1036 aa9.43□□□□□ -0.9
NHLRC3-201ENST00000379599 ASB3Q9Y575 518 aa9.43□□□□□ -0.9
NHLRC3-201ENST00000379599 NUB1Q9Y5A7 615 aa9.43□□□□□ -0.9
NHLRC3-201ENST00000379599 A0A1W2PQ27 194 aa9.43□□□□□ -0.9
NHLRC3-201ENST00000379599 A0A1W2PQ64 194 aa9.43□□□□□ -0.9
NHLRC3-201ENST00000379599 A0A1W2PQD8 194 aa9.43□□□□□ -0.9
NHLRC3-201ENST00000379599 ZNF233A6NK53 670 aa9.43□□□□□ -0.9
NHLRC3-201ENST00000379599 SLC27A2O14975 620 aa9.43□□□□□ -0.9
NHLRC3-201ENST00000379599 SPTLC2O15270 562 aa9.43□□□□□ -0.9
NHLRC3-201ENST00000379599 VCAM1P19320 739 aa9.43□□□□□ -0.9
NHLRC3-201ENST00000379599 GUCY2FP51841 1108 aa9.43□□□□□ -0.9
NHLRC3-201ENST00000379599 KCNJ2P63252 427 aa9.43□□□□□ -0.9
NHLRC3-201ENST00000379599 PAK2Q13177 524 aa9.43□□□□□ -0.9
NHLRC3-201ENST00000379599 ABTB1Q969K4 478 aaPredicted RBP9.43□□□□□ -0.9
NHLRC3-201ENST00000379599 LRRC2Q9BYS8 371 aa9.43□□□□□ -0.9
NHLRC3-201ENST00000379599 TMEM98Q9Y2Y6 226 aa9.43□□□□□ -0.9
NHLRC3-201ENST00000379599 CLIC4Q9Y696 253 aa9.43□□□□□ -0.9
NHLRC3-201ENST00000379599 PTPRTO14522 1441 aa9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 TROQ12816 1431 aaPredicted RBP9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 FAM83GA6ND36 823 aa9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 A8MUI8 341 aa9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 PDE2AO00408 941 aaPredicted RBP9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 FLOT1O75955 427 aa9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 ALOX15P16050 662 aaPredicted RBP9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 SYKP43405 635 aa9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 USP46P62068 366 aa9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 PDE4BQ07343 736 aa9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 GLE1Q53GS7 698 aaKnown RBP9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 EMBQ6PCB8 327 aa9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 GET4Q7L5D6 327 aaPredicted RBP9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 ANKS4BQ8N8V4 417 aa9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 CCDC197Q8NCU1 140 aa9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 WDR66Q8TBY9 1149 aa9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 TRAIPQ9BWF2 469 aa9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 MOV10L1Q9BXT6 1211 aaKnown RBP9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 UBAP1Q9NZ09 502 aa9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 THRAP3Q9Y2W1 955 aaKnown RBP9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 NSD2O96028 1365 aa9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 CFAP73A6NFT4 308 aa9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 PDLIM1O00151 329 aa9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 HIP1RO75146 1068 aa9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 VIMP08670 466 aaKnown RBP9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 SP100P23497 879 aaPredicted RBP9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 MARCKSP29966 332 aaPredicted RBP9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 ALDH5A1P51649 535 aaPredicted RBP9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 LACTBP83111 547 aaPredicted RBP9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 ATP11AP98196 1134 aa9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 KLC1Q07866 573 aa9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 RASIP1Q5U651 963 aa9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 ZNF365Q70YC5 407 aa9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 ZCRB1Q8TBF4 217 aaKnown RBP9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 SNRNP27Q8WVK2 155 aaKnown RBP9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 SAMSN1Q9NSI8 373 aaKnown RBP9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 TFR2Q9UP52 801 aa9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 ARHGEF5Q12774 1597 aa9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 ATP10BO94823 1461 aa9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 NPHP4O75161 1426 aaPredicted RBP9.42□□□□□ -0.9
NHLRC3-201ENST00000379599 TRAPPC3O43617 180 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 VAV2P52735 878 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 SESN3P58005 492 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 ADCY1Q08828 1119 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 POLA2Q14181 598 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 MAP7D1Q3KQU3 841 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 CCDC122Q5T0U0 273 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 NANOGNBQ7Z5D8 188 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 GBP7Q8N8V2 638 aaPredicted RBP9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 DHRS1Q96LJ7 313 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 CORO1BQ9BR76 489 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 MTA3Q9BTC8 594 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 SENP2Q9HC62 589 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 CHMP2BQ9UQN3 213 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 TAF6LQ9Y6J9 622 aa9.41□□□□□ -0.9
NHLRC3-201ENST00000379599 GPATCH8Q9UKJ3 1502 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms