RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 GCNAQ96QF7 691 aa7.39□□□□□ -1.23
NEDD9-202ENST00000379446 USP44Q9H0E7 712 aa7.39□□□□□ -1.23
NEDD9-202ENST00000379446 ZDHHC9Q9Y397 364 aa7.39□□□□□ -1.23
NEDD9-202ENST00000379446 COMMD10Q9Y6G5 202 aa7.39□□□□□ -1.23
NEDD9-202ENST00000379446 CDK12Q9NYV4 1490 aaPredicted RBP7.38□□□□□ -1.23
NEDD9-202ENST00000379446 MYO3AQ8NEV4 1616 aa7.38□□□□□ -1.23
NEDD9-202ENST00000379446 SOS1Q07889 1333 aaPredicted RBP7.38□□□□□ -1.23
NEDD9-202ENST00000379446 CCDC66A2RUB6 948 aa7.38□□□□□ -1.23
NEDD9-202ENST00000379446 ADCY5O95622 1261 aa7.38□□□□□ -1.23
NEDD9-202ENST00000379446 CETN1Q12798 172 aa7.38□□□□□ -1.23
NEDD9-202ENST00000379446 CEP57L1Q8IYX8 460 aa7.38□□□□□ -1.23
NEDD9-202ENST00000379446 CD99L2Q8TCZ2 262 aa7.38□□□□□ -1.23
NEDD9-202ENST00000379446 AKT1S1Q96B36 256 aa7.38□□□□□ -1.23
NEDD9-202ENST00000379446 ZNF396Q96N95 335 aaPredicted RBP7.38□□□□□ -1.23
NEDD9-202ENST00000379446 TFIP11Q9UBB9 837 aaKnown RBP7.38□□□□□ -1.23
NEDD9-202ENST00000379446 ADGRB2O60241 1585 aa7.38□□□□□ -1.23
NEDD9-202ENST00000379446 LETM1O95202 739 aaPredicted RBP7.38□□□□□ -1.23
NEDD9-202ENST00000379446 ODR4Q5SWX8 454 aa7.38□□□□□ -1.23
NEDD9-202ENST00000379446 ZNF280CQ8ND82 737 aa7.38□□□□□ -1.23
NEDD9-202ENST00000379446 ARPP21Q9UBL0 812 aaPredicted RBP7.38□□□□□ -1.23
NEDD9-202ENST00000379446 DCCP43146 1447 aa7.38□□□□□ -1.23
NEDD9-202ENST00000379446 SPATA31D1Q6ZQQ2 1576 aa7.38□□□□□ -1.23
NEDD9-202ENST00000379446 KIAA0100Q14667 2235 aaKnown RBP7.38□□□□□ -1.23
NEDD9-202ENST00000379446 GPAA1O43292 621 aa7.38□□□□□ -1.23
NEDD9-202ENST00000379446 DNM1Q05193 864 aaKnown RBP7.38□□□□□ -1.23
NEDD9-202ENST00000379446 CCDC183Q5T5S1 534 aa7.38□□□□□ -1.23
NEDD9-202ENST00000379446 PDE4DIPQ5VU43 2346 aa7.38□□□□□ -1.23
NEDD9-202ENST00000379446 TTLL11Q8NHH1 800 aa7.38□□□□□ -1.23
NEDD9-202ENST00000379446 PPP1R9BQ96SB3 815 aa7.38□□□□□ -1.23
NEDD9-202ENST00000379446 YME1L1Q96TA2 773 aa7.38□□□□□ -1.23
NEDD9-202ENST00000379446 IGFLR1Q9H665 355 aa7.38□□□□□ -1.23
NEDD9-202ENST00000379446 RAVER2Q9HCJ3 691 aaKnown RBP7.38□□□□□ -1.23
NEDD9-202ENST00000379446 GPRC5DQ9NZD1 345 aa7.38□□□□□ -1.23
NEDD9-202ENST00000379446 CEP131Q9UPN4 1083 aa7.38□□□□□ -1.23
NEDD9-202ENST00000379446 DIP2CQ9Y2E4 1556 aa7.38□□□□□ -1.23
NEDD9-202ENST00000379446 ARHGEF28Q8N1W1 1705 aaKnown RBP7.37□□□□□ -1.23
NEDD9-202ENST00000379446 PDHXO00330 501 aa7.37□□□□□ -1.23
NEDD9-202ENST00000379446 BRD1O95696 1058 aa7.37□□□□□ -1.23
NEDD9-202ENST00000379446 HMGB1P09429 215 aaKnown RBP7.37□□□□□ -1.23
NEDD9-202ENST00000379446 ZSCAN22P10073 491 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-202ENST00000379446 EIF2AK2P19525 551 aaKnown RBP7.37□□□□□ -1.23
NEDD9-202ENST00000379446 RDXP35241 583 aaKnown RBP7.37□□□□□ -1.23
NEDD9-202ENST00000379446 GTF2F1P35269 517 aaKnown RBP eCLIP7.37□□□□□ -1.237e-8■■■□□ 19.1
NEDD9-202ENST00000379446 STAT2P52630 851 aa7.37□□□□□ -1.23
NEDD9-202ENST00000379446 SLC8A3P57103 927 aa7.37□□□□□ -1.23
NEDD9-202ENST00000379446 STRN3Q13033 797 aa7.37□□□□□ -1.23
NEDD9-202ENST00000379446 HS1BP3Q53T59 392 aa7.37□□□□□ -1.23
NEDD9-202ENST00000379446 NBPF12Q5TAG4 269 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-202ENST00000379446 FAM160B1Q5W0V3 765 aa7.37□□□□□ -1.23
NEDD9-202ENST00000379446 FAM173BQ6P4H8 233 aa7.37□□□□□ -1.23
NEDD9-202ENST00000379446 MOB2Q70IA6 237 aa7.37□□□□□ -1.23
NEDD9-202ENST00000379446 KCTD1Q719H9 257 aa7.37□□□□□ -1.23
NEDD9-202ENST00000379446 RNF34Q969K3 372 aa7.37□□□□□ -1.23
NEDD9-202ENST00000379446 KIF24Q5T7B8 1368 aa7.37□□□□□ -1.23
NEDD9-202ENST00000379446 PLEKHG2Q9H7P9 1386 aa7.37□□□□□ -1.23
NEDD9-202ENST00000379446 B4E1Z4 1266 aa7.37□□□□□ -1.23
NEDD9-202ENST00000379446 POLR3GO15318 223 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-202ENST00000379446 FAM13AO94988 1023 aa7.37□□□□□ -1.23
NEDD9-202ENST00000379446 GOLGA8HP0CJ92 632 aa7.37□□□□□ -1.23
NEDD9-202ENST00000379446 ANAPC15P60006 121 aa7.37□□□□□ -1.23
NEDD9-202ENST00000379446 RAB23Q9ULC3 237 aa7.37□□□□□ -1.23
NEDD9-202ENST00000379446 FAM50BQ9Y247 325 aa7.37□□□□□ -1.23
NEDD9-202ENST00000379446 CDC42BPGQ6DT37 1551 aa7.37□□□□□ -1.23
NEDD9-202ENST00000379446 CAMTA2O94983 1202 aa7.37□□□□□ -1.23
NEDD9-202ENST00000379446 PRDX5P30044 214 aa7.37□□□□□ -1.23
NEDD9-202ENST00000379446 NLRP7Q8WX94 980 aa7.37□□□□□ -1.23
NEDD9-202ENST00000379446 GTPBP4Q9BZE4 634 aaKnown RBP7.37□□□□□ -1.23
NEDD9-202ENST00000379446 BCL2L12Q9HB09 334 aa7.37□□□□□ -1.23
NEDD9-202ENST00000379446 NRBP2Q9NSY0 501 aa7.37□□□□□ -1.23
NEDD9-202ENST00000379446 SNX14Q9Y5W7 946 aa7.37□□□□□ -1.23
NEDD9-202ENST00000379446 KRT19P08727 400 aa7.37□□□□□ -1.23
NEDD9-202ENST00000379446 SYT1P21579 422 aa7.37□□□□□ -1.23
NEDD9-202ENST00000379446 YARSP54577 528 aaKnown RBP7.37□□□□□ -1.23
NEDD9-202ENST00000379446 DYNLL1P63167 89 aaKnown RBP7.37□□□□□ -1.23
NEDD9-202ENST00000379446 CCDC85BQ15834 202 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-202ENST00000379446 ENOX2Q16206 610 aaKnown RBP7.37□□□□□ -1.23
NEDD9-202ENST00000379446 LETM2Q2VYF4 491 aa7.37□□□□□ -1.23
NEDD9-202ENST00000379446 PDILTQ8N807 584 aa7.37□□□□□ -1.23
NEDD9-202ENST00000379446 TRIM5Q9C035 493 aa7.37□□□□□ -1.23
NEDD9-202ENST00000379446 RPAP3Q9H6T3 665 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-202ENST00000379446 ORC3Q9UBD5 711 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-202ENST00000379446 SWAP70Q9UH65 585 aa7.37□□□□□ -1.23
NEDD9-202ENST00000379446 GRK4P32298 578 aa7.36□□□□□ -1.23
NEDD9-202ENST00000379446 CTDSPL2Q05D32 466 aa7.36□□□□□ -1.23
NEDD9-202ENST00000379446 TTLL4Q14679 1199 aa7.36□□□□□ -1.23
NEDD9-202ENST00000379446 CEP57Q86XR8 500 aa7.36□□□□□ -1.23
NEDD9-202ENST00000379446 RASEFQ8IZ41 740 aa7.36□□□□□ -1.23
NEDD9-202ENST00000379446 CCDC112Q8NEF3 446 aa7.36□□□□□ -1.23
NEDD9-202ENST00000379446 ATP10DQ9P241 1426 aa7.36□□□□□ -1.23
NEDD9-202ENST00000379446 NEURL4Q96JN8 1562 aa7.36□□□□□ -1.23
NEDD9-202ENST00000379446 ARHGEF35A5YM69 484 aa7.36□□□□□ -1.23
NEDD9-202ENST00000379446 POLRMTO00411 1230 aaKnown RBP7.36□□□□□ -1.23
NEDD9-202ENST00000379446 KINO60870 393 aaKnown RBP7.36□□□□□ -1.23
NEDD9-202ENST00000379446 SLC16A2P36021 539 aa7.36□□□□□ -1.23
NEDD9-202ENST00000379446 GCLCP48506 637 aaPredicted RBP7.36□□□□□ -1.23
NEDD9-202ENST00000379446 DDR1Q08345 913 aa7.36□□□□□ -1.23
NEDD9-202ENST00000379446 BIRC3Q13489 604 aa7.36□□□□□ -1.23
NEDD9-202ENST00000379446 PLEKHH3Q7Z736 793 aa7.36□□□□□ -1.23
NEDD9-202ENST00000379446 OR6J1Q8NGC5 347 aa7.36□□□□□ -1.23
NEDD9-202ENST00000379446 CPLX3Q8WVH0 158 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms