RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 ZSCAN10Q96SZ4 725 aaPredicted RBP20.32■□□□□ 0.84
GNE-201ENST00000377902 HINFPQ9BQA5 517 aa20.32■□□□□ 0.84
GNE-201ENST00000377902 RNF41Q9H4P4 317 aaPredicted RBP20.32■□□□□ 0.84
GNE-201ENST00000377902 PES1O00541 588 aaKnown RBP20.32■□□□□ 0.84
GNE-201ENST00000377902 SEMA3EO15041 775 aa20.32■□□□□ 0.84
GNE-201ENST00000377902 ZMYND10O75800 440 aa20.32■□□□□ 0.84
GNE-201ENST00000377902 DYNLL1P63167 89 aaKnown RBP20.32■□□□□ 0.84
GNE-201ENST00000377902 IFIT1BQ5T764 474 aaKnown RBP20.32■□□□□ 0.84
GNE-201ENST00000377902 PDXDC2PQ6P474 469 aa20.32■□□□□ 0.84
GNE-201ENST00000377902 SHANK3Q9BYB0 1731 aa20.32■□□□□ 0.84
GNE-201ENST00000377902 MYH2Q9UKX2 1941 aa20.31■□□□□ 0.84
GNE-201ENST00000377902 LRRC10BA6NIK2 292 aa20.31■□□□□ 0.84
GNE-201ENST00000377902 POTEB2H3BUK9 544 aa20.31■□□□□ 0.84
GNE-201ENST00000377902 PRCPP42785 496 aa20.31■□□□□ 0.84
GNE-201ENST00000377902 PAK1Q13153 545 aa20.31■□□□□ 0.84
GNE-201ENST00000377902 CT47A1Q5JQC4 288 aaPredicted RBP20.31■□□□□ 0.84
GNE-201ENST00000377902 SUSD4Q5VX71 490 aa20.31■□□□□ 0.84
GNE-201ENST00000377902 CCDC51Q96ER9 411 aa20.31■□□□□ 0.84
GNE-201ENST00000377902 TTC26A0AVF1 554 aa20.31■□□□□ 0.84
GNE-201ENST00000377902 PRPF3O43395 683 aaKnown RBP20.31■□□□□ 0.84
GNE-201ENST00000377902 PMS1P54277 932 aaKnown RBP20.31■□□□□ 0.84
GNE-201ENST00000377902 ATP2C1P98194 919 aaPredicted RBP20.31■□□□□ 0.84
GNE-201ENST00000377902 WHAMMP3Q1A5X7 153 aa20.31■□□□□ 0.84
GNE-201ENST00000377902 SLIT2O94813 1529 aa20.31■□□□□ 0.84
GNE-201ENST00000377902 ANKRD65E5RJM6 399 aa20.3■□□□□ 0.84
GNE-201ENST00000377902 PIP4K2BP78356 416 aa20.3■□□□□ 0.84
GNE-201ENST00000377902 CADPS2Q86UW7 1296 aa20.3■□□□□ 0.84
GNE-201ENST00000377902 IRF2BP1Q8IU81 584 aa20.3■□□□□ 0.84
GNE-201ENST00000377902 IQUBQ8NA54 791 aa20.3■□□□□ 0.84
GNE-201ENST00000377902 CAPZA3Q96KX2 299 aa20.3■□□□□ 0.84
GNE-201ENST00000377902 RWDD2AQ9UIY3 292 aa20.3■□□□□ 0.84
GNE-201ENST00000377902 EPN1Q9Y6I3 576 aaPredicted RBP20.3■□□□□ 0.84
GNE-201ENST00000377902 EIF3JO75822 258 aaKnown RBP20.3■□□□□ 0.84
GNE-201ENST00000377902 NDUFA10O95299 355 aa20.3■□□□□ 0.84
GNE-201ENST00000377902 TROAPQ12815 778 aa20.3■□□□□ 0.84
GNE-201ENST00000377902 CATIPQ7Z7H3 387 aa20.3■□□□□ 0.84
GNE-201ENST00000377902 SRLQ86TD4 932 aa20.3■□□□□ 0.84
GNE-201ENST00000377902 SRBD1Q8N5C6 995 aaKnown RBP20.3■□□□□ 0.84
GNE-201ENST00000377902 MMS19Q96T76 1030 aa20.3■□□□□ 0.84
GNE-201ENST00000377902 RRP15Q9Y3B9 282 aaKnown RBP20.3■□□□□ 0.84
GNE-201ENST00000377902 ATP1A1P05023 1023 aaKnown RBP20.29■□□□□ 0.84
GNE-201ENST00000377902 LEKR1Q6ZMV7 388 aa20.29■□□□□ 0.84
GNE-201ENST00000377902 SLC20A2Q08357 652 aa20.29■□□□□ 0.84
GNE-201ENST00000377902 SKIDA1Q1XH10 827 aa20.29■□□□□ 0.84
GNE-201ENST00000377902 RIN2Q8WYP3 895 aaPredicted RBP20.29■□□□□ 0.84
GNE-201ENST00000377902 PLIN2Q99541 437 aa20.29■□□□□ 0.84
GNE-201ENST00000377902 DOCK2Q92608 1830 aa20.29■□□□□ 0.84
GNE-201ENST00000377902 BCL9LQ86UU0 1499 aa20.28■□□□□ 0.84
GNE-201ENST00000377902 MAGEB6P1A0A0J9YX57 407 aa20.28■□□□□ 0.84
GNE-201ENST00000377902 BRINP3Q76B58 766 aa20.28■□□□□ 0.84
GNE-201ENST00000377902 GSPT2Q8IYD1 628 aaKnown RBP20.28■□□□□ 0.84
GNE-201ENST00000377902 CWC15Q9P013 229 aaKnown RBP20.28■□□□□ 0.84
GNE-201ENST00000377902 RTL9Q8NET4 1388 aa20.28■□□□□ 0.84
GNE-201ENST00000377902 RPN1P04843 607 aaKnown RBP20.28■□□□□ 0.84
GNE-201ENST00000377902 GYG1P46976 350 aa20.28■□□□□ 0.84
GNE-201ENST00000377902 TUBB2AQ13885 445 aa20.28■□□□□ 0.84
GNE-201ENST00000377902 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.28■□□□□ 0.84
GNE-201ENST00000377902 TUBB2BQ9BVA1 445 aa20.28■□□□□ 0.84
GNE-201ENST00000377902 RASSF4Q9H2L5 321 aa20.28■□□□□ 0.84
GNE-201ENST00000377902 FAM204AQ9H8W3 233 aa20.28■□□□□ 0.84
GNE-201ENST00000377902 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.28■□□□□ 0.84
GNE-201ENST00000377902 PARP1P09874 1014 aaKnown RBP20.27■□□□□ 0.84
GNE-201ENST00000377902 RCAN1P53805 252 aa20.27■□□□□ 0.84
GNE-201ENST00000377902 HERVK_113P62684 666 aa20.27■□□□□ 0.84
GNE-201ENST00000377902 SLC4A8Q2Y0W8 1093 aa20.27■□□□□ 0.84
GNE-201ENST00000377902 ZNF34Q8IZ26 560 aa20.27■□□□□ 0.84
GNE-201ENST00000377902 BCORQ6W2J9 1755 aa20.27■□□□□ 0.84
GNE-201ENST00000377902 PP2D1A8MPX8 630 aa20.27■□□□□ 0.83
GNE-201ENST00000377902 NLRP5P59047 1200 aa20.27■□□□□ 0.83
GNE-201ENST00000377902 HSP90B2PQ58FF3 399 aa20.27■□□□□ 0.83
GNE-201ENST00000377902 FAM47AQ5JRC9 791 aa20.27■□□□□ 0.83
GNE-201ENST00000377902 ZNF658Q5TYW1 1059 aaPredicted RBP20.27■□□□□ 0.83
GNE-201ENST00000377902 WDR59Q6PJI9 974 aa20.27■□□□□ 0.83
GNE-201ENST00000377902 TRAPPC11Q7Z392 1133 aa20.27■□□□□ 0.83
GNE-201ENST00000377902 RSPH14Q9UHP6 348 aa20.27■□□□□ 0.83
GNE-201ENST00000377902 GTPBP6O43824 516 aaPredicted RBP20.26■□□□□ 0.83
GNE-201ENST00000377902 TNNT3P45378 269 aaPredicted RBP20.26■□□□□ 0.83
GNE-201ENST00000377902 RASGRP4Q8TDF6 673 aa20.26■□□□□ 0.83
GNE-201ENST00000377902 BRMS1Q9HCU9 246 aa20.26■□□□□ 0.83
GNE-201ENST00000377902 DUSP10Q9Y6W6 482 aa20.26■□□□□ 0.83
GNE-201ENST00000377902 BAZ2AQ9UIF9 1905 aaKnown RBP20.26■□□□□ 0.83
GNE-201ENST00000377902 NUP98P52948 1817 aa20.26■□□□□ 0.83
GNE-201ENST00000377902 RCCD1A6NED2 376 aa20.26■□□□□ 0.83
GNE-201ENST00000377902 ZNF185O15231 689 aa20.26■□□□□ 0.83
GNE-201ENST00000377902 SYF2O95926 243 aaKnown RBP20.26■□□□□ 0.83
GNE-201ENST00000377902 KLK7P49862 253 aa20.26■□□□□ 0.83
GNE-201ENST00000377902 CHRNDQ07001 517 aa20.26■□□□□ 0.83
GNE-201ENST00000377902 TMTC3Q6ZXV5 915 aa20.26■□□□□ 0.83
GNE-201ENST00000377902 CNTNAP5Q8WYK1 1306 aa20.25■□□□□ 0.83
GNE-201ENST00000377902 CCDC122Q5T0U0 273 aa20.25■□□□□ 0.83
GNE-201ENST00000377902 LRRC31Q6UY01 552 aa20.25■□□□□ 0.83
GNE-201ENST00000377902 CCDC148Q8NFR7 591 aa20.25■□□□□ 0.83
GNE-201ENST00000377902 MTA3Q9BTC8 594 aa20.25■□□□□ 0.83
GNE-201ENST00000377902 AGPAT5Q9NUQ2 364 aa20.25■□□□□ 0.83
GNE-201ENST00000377902 MYO1AQ9UBC5 1043 aa20.25■□□□□ 0.83
GNE-201ENST00000377902 STRCP1A6NGW2 1772 aa20.25■□□□□ 0.83
GNE-201ENST00000377902 MB21D1Q8N884 522 aa20.25■□□□□ 0.83
GNE-201ENST00000377902 FAM71BQ8TC56 605 aa20.25■□□□□ 0.83
GNE-201ENST00000377902 RIOK1Q9BRS2 568 aaKnown RBP20.25■□□□□ 0.83
GNE-201ENST00000377902 RNF40O75150 1001 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms