RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 HERVK_113P62684 666 aa12.94□□□□□ -0.34
TM9SF2-201ENST00000376387 SATB1Q01826 763 aa12.94□□□□□ -0.34
TM9SF2-201ENST00000376387 TCIRG1Q13488 830 aa12.94□□□□□ -0.34
TM9SF2-201ENST00000376387 RRAGBQ5VZM2 374 aa12.94□□□□□ -0.34
TM9SF2-201ENST00000376387 LDHAL6AQ6ZMR3 332 aa12.94□□□□□ -0.34
TM9SF2-201ENST00000376387 HELBQ8NG08 1087 aaPredicted RBP12.94□□□□□ -0.34
TM9SF2-201ENST00000376387 CCDC51Q96ER9 411 aa12.94□□□□□ -0.34
TM9SF2-201ENST00000376387 ISCA1Q9BUE6 129 aa12.94□□□□□ -0.34
TM9SF2-201ENST00000376387 NAPBQ9H115 298 aa12.94□□□□□ -0.34
TM9SF2-201ENST00000376387 EPN1Q9Y6I3 576 aaPredicted RBP12.94□□□□□ -0.34
TM9SF2-201ENST00000376387 ATRNO75882 1429 aa12.94□□□□□ -0.34
TM9SF2-201ENST00000376387 PDE2AO00408 941 aaPredicted RBP12.94□□□□□ -0.34
TM9SF2-201ENST00000376387 NDUFA10O95299 355 aa12.94□□□□□ -0.34
TM9SF2-201ENST00000376387 UBE3CQ15386 1083 aa12.94□□□□□ -0.34
TM9SF2-201ENST00000376387 NBPF9Q3BBW0 867 aa12.94□□□□□ -0.34
TM9SF2-201ENST00000376387 LIMA1Q9UHB6 759 aaKnown RBP12.94□□□□□ -0.34
TM9SF2-201ENST00000376387 TRPM3Q9HCF6 1732 aaPredicted RBP12.93□□□□□ -0.34
TM9SF2-201ENST00000376387 RCCD1A6NED2 376 aa12.93□□□□□ -0.34
TM9SF2-201ENST00000376387 DEXIO95424 95 aa12.93□□□□□ -0.34
TM9SF2-201ENST00000376387 E2F4Q16254 413 aa12.93□□□□□ -0.34
TM9SF2-201ENST00000376387 TTC19Q6DKK2 380 aaPredicted RBP12.93□□□□□ -0.34
TM9SF2-201ENST00000376387 TTLL11Q8NHH1 800 aa12.93□□□□□ -0.34
TM9SF2-201ENST00000376387 PPM1EQ8WY54 764 aa12.93□□□□□ -0.34
TM9SF2-201ENST00000376387 KAT14Q9H8E8 782 aa12.93□□□□□ -0.34
TM9SF2-201ENST00000376387 TTC26A0AVF1 554 aa12.93□□□□□ -0.34
TM9SF2-201ENST00000376387 TRIM75PA6NK02 468 aa12.93□□□□□ -0.34
TM9SF2-201ENST00000376387 STIM1Q13586 685 aa12.93□□□□□ -0.34
TM9SF2-201ENST00000376387 WTAPQ15007 396 aa12.93□□□□□ -0.34
TM9SF2-201ENST00000376387 AKNAD1Q5T1N1 836 aa12.93□□□□□ -0.34
TM9SF2-201ENST00000376387 MAGEB6Q8N7X4 407 aa12.93□□□□□ -0.34
TM9SF2-201ENST00000376387 COG1Q8WTW3 980 aa12.93□□□□□ -0.34
TM9SF2-201ENST00000376387 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.93□□□□□ -0.341e-8■□□□□ 11.3
TM9SF2-201ENST00000376387 GDAQ9Y2T3 454 aa12.93□□□□□ -0.34
TM9SF2-201ENST00000376387 DUSP10Q9Y6W6 482 aa12.93□□□□□ -0.34
TM9SF2-201ENST00000376387 TRIM49BA6NDI0 452 aa12.93□□□□□ -0.34
TM9SF2-201ENST00000376387 KCNJ18B7U540 433 aa12.93□□□□□ -0.34
TM9SF2-201ENST00000376387 UBXN1Q04323 297 aa12.93□□□□□ -0.34
TM9SF2-201ENST00000376387 KCNJ12Q14500 433 aa12.93□□□□□ -0.34
TM9SF2-201ENST00000376387 TCP11X2Q5H9J9 407 aa12.93□□□□□ -0.34
TM9SF2-201ENST00000376387 KAT2BQ92831 832 aa12.93□□□□□ -0.34
TM9SF2-201ENST00000376387 GSDMAQ96QA5 445 aa12.93□□□□□ -0.34
TM9SF2-201ENST00000376387 GPBP1L1Q9HC44 474 aaPredicted RBP12.93□□□□□ -0.34
TM9SF2-201ENST00000376387 CEP131Q9UPN4 1083 aa12.93□□□□□ -0.34
TM9SF2-201ENST00000376387 MYH6P13533 1939 aa12.92□□□□□ -0.34
TM9SF2-201ENST00000376387 GSG1L2A8MUP6 293 aa12.92□□□□□ -0.34
TM9SF2-201ENST00000376387 ADAMTS3O15072 1205 aa12.92□□□□□ -0.34
TM9SF2-201ENST00000376387 ITGA6P23229 1130 aa12.92□□□□□ -0.34
TM9SF2-201ENST00000376387 CCT5P48643 541 aa12.92□□□□□ -0.34
TM9SF2-201ENST00000376387 C2orf54Q08AI8 447 aa12.92□□□□□ -0.34
TM9SF2-201ENST00000376387 RBM26Q5T8P6 1007 aaKnown RBP12.92□□□□□ -0.34
TM9SF2-201ENST00000376387 MFSD6Q6ZSS7 791 aa12.92□□□□□ -0.34
TM9SF2-201ENST00000376387 MICALL1Q8N3F8 863 aa12.92□□□□□ -0.34
TM9SF2-201ENST00000376387 FANCBQ8NB91 859 aa12.92□□□□□ -0.34
TM9SF2-201ENST00000376387 ACBD3Q9H3P7 528 aa12.92□□□□□ -0.34
TM9SF2-201ENST00000376387 VIPAS39Q9H9C1 493 aa12.92□□□□□ -0.34
TM9SF2-201ENST00000376387 MYO1AQ9UBC5 1043 aa12.92□□□□□ -0.34
TM9SF2-201ENST00000376387 PARP4Q9UKK3 1724 aaKnown RBP12.92□□□□□ -0.34
TM9SF2-201ENST00000376387 WDR17Q8IZU2 1322 aa12.92□□□□□ -0.34
TM9SF2-201ENST00000376387 BCL9LQ86UU0 1499 aa12.92□□□□□ -0.34
TM9SF2-201ENST00000376387 GOLGA6CA6NDK9 693 aa12.92□□□□□ -0.34
TM9SF2-201ENST00000376387 GOLGA6BA6NDN3 693 aa12.92□□□□□ -0.34
TM9SF2-201ENST00000376387 EXOC5O00471 708 aa12.92□□□□□ -0.34
TM9SF2-201ENST00000376387 SEMA3EO15041 775 aa12.92□□□□□ -0.34
TM9SF2-201ENST00000376387 CSF1RP07333 972 aa12.92□□□□□ -0.34
TM9SF2-201ENST00000376387 GOLGA6DP0CG33 693 aa12.92□□□□□ -0.34
TM9SF2-201ENST00000376387 GPTP24298 496 aa12.92□□□□□ -0.34
TM9SF2-201ENST00000376387 TUBB4BP68371 445 aa12.92□□□□□ -0.34
TM9SF2-201ENST00000376387 EZH2Q15910 746 aaKnown RBP12.92□□□□□ -0.34
TM9SF2-201ENST00000376387 CTR9Q6PD62 1173 aa12.92□□□□□ -0.34
TM9SF2-201ENST00000376387 WDR59Q6PJI9 974 aa12.92□□□□□ -0.34
TM9SF2-201ENST00000376387 NELFBQ8WX92 580 aa12.92□□□□□ -0.34
TM9SF2-201ENST00000376387 SMARCC1Q92922 1105 aaPredicted RBP12.92□□□□□ -0.34
TM9SF2-201ENST00000376387 EEF2KMTQ96G04 330 aa12.92□□□□□ -0.34
TM9SF2-201ENST00000376387 SELENOOQ9BVL4 669 aa12.92□□□□□ -0.34
TM9SF2-201ENST00000376387 CNNM1Q9NRU3 951 aa12.92□□□□□ -0.34
TM9SF2-201ENST00000376387 GOLGA6AQ9NYA3 693 aa12.92□□□□□ -0.34
TM9SF2-201ENST00000376387 TBC1D2BQ9UPU7 963 aa12.92□□□□□ -0.34
TM9SF2-201ENST00000376387 SAR1BQ9Y6B6 198 aa12.92□□□□□ -0.34
TM9SF2-201ENST00000376387 LRRC10BA6NIK2 292 aa12.91□□□□□ -0.34
TM9SF2-201ENST00000376387 PSMD14O00487 310 aa12.91□□□□□ -0.34
TM9SF2-201ENST00000376387 PEX14O75381 377 aa12.91□□□□□ -0.34
TM9SF2-201ENST00000376387 GUCY2CP25092 1073 aa12.91□□□□□ -0.34
TM9SF2-201ENST00000376387 SSR1P43307 286 aaKnown RBP12.91□□□□□ -0.34
TM9SF2-201ENST00000376387 PKN1Q16512 942 aa12.91□□□□□ -0.34
TM9SF2-201ENST00000376387 CCDC122Q5T0U0 273 aa12.91□□□□□ -0.34
TM9SF2-201ENST00000376387 IRF2BP1Q8IU81 584 aa12.91□□□□□ -0.34
TM9SF2-201ENST00000376387 ZNF654Q8IZM8 581 aa12.91□□□□□ -0.34
TM9SF2-201ENST00000376387 RRP36Q96EU6 259 aaKnown RBP12.91□□□□□ -0.34
TM9SF2-201ENST00000376387 LACRTQ9GZZ8 138 aa12.91□□□□□ -0.34
TM9SF2-201ENST00000376387 GNL3LQ9NVN8 582 aaKnown RBP12.91□□□□□ -0.34
TM9SF2-201ENST00000376387 SPATA31A3Q5VYP0 1347 aa12.91□□□□□ -0.34
TM9SF2-201ENST00000376387 STRCP1A6NGW2 1772 aa12.91□□□□□ -0.34
TM9SF2-201ENST00000376387 LIG3P49916 1009 aa12.91□□□□□ -0.34
TM9SF2-201ENST00000376387 TTF1Q15361 905 aaPredicted RBP12.91□□□□□ -0.34
TM9SF2-201ENST00000376387 VGLL2Q8N8G2 317 aa12.91□□□□□ -0.34
TM9SF2-201ENST00000376387 HDAC7Q8WUI4 952 aa12.91□□□□□ -0.34
TM9SF2-201ENST00000376387 ABCC12Q96J65 1359 aa12.91□□□□□ -0.34
TM9SF2-201ENST00000376387 CEP83Q9Y592 693 aa12.91□□□□□ -0.34
TM9SF2-201ENST00000376387 RBM5P52756 815 aaKnown RBP eCLIP12.91□□□□□ -0.34
TM9SF2-201ENST00000376387 PMS1P54277 932 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms