RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 SRGAP1Q7Z6B7 1085 aa21.79■■□□□ 1.08
COL15A1-201ENST00000375001 GABPB2Q8TAK5 448 aaPredicted RBP21.79■■□□□ 1.08
COL15A1-201ENST00000375001 ANTXR1Q9H6X2 564 aa21.79■■□□□ 1.08
COL15A1-201ENST00000375001 SERTAD1Q9UHV2 236 aa21.79■■□□□ 1.08
COL15A1-201ENST00000375001 FBXO41Q8TF61 875 aa21.79■■□□□ 1.08
COL15A1-201ENST00000375001 INTS9Q9NV88 658 aaKnown RBP21.79■■□□□ 1.08
COL15A1-201ENST00000375001 ABCB4P21439 1286 aa21.78■■□□□ 1.08
COL15A1-201ENST00000375001 ADAT2Q7Z6V5 191 aaKnown RBP21.78■■□□□ 1.08
COL15A1-201ENST00000375001 FCHSD1Q86WN1 690 aa21.78■■□□□ 1.08
COL15A1-201ENST00000375001 DZIP3Q86Y13 1208 aaKnown RBP21.78■■□□□ 1.08
COL15A1-201ENST00000375001 PARP1P09874 1014 aaKnown RBP21.78■■□□□ 1.08
COL15A1-201ENST00000375001 HNRNPH2P55795 449 aaKnown RBP21.78■■□□□ 1.08
COL15A1-201ENST00000375001 APBA1Q02410 837 aa21.78■■□□□ 1.08
COL15A1-201ENST00000375001 LRRC8CQ8TDW0 803 aa21.78■■□□□ 1.08
COL15A1-201ENST00000375001 APPBP2Q92624 585 aa21.78■■□□□ 1.08
COL15A1-201ENST00000375001 RNF34Q969K3 372 aa21.78■■□□□ 1.08
COL15A1-201ENST00000375001 MRFAP1Q9Y605 127 aa21.78■■□□□ 1.08
COL15A1-201ENST00000375001 KIAA0556O60303 1618 aa21.78■■□□□ 1.08
COL15A1-201ENST00000375001 DNAJC8O75937 253 aaPredicted RBP21.78■■□□□ 1.08
COL15A1-201ENST00000375001 APOEP02649 317 aa21.78■■□□□ 1.08
COL15A1-201ENST00000375001 TCP1P17987 556 aaKnown RBP21.78■■□□□ 1.08
COL15A1-201ENST00000375001 ZNF622Q969S3 477 aaKnown RBP eCLIP21.78■■□□□ 1.08
COL15A1-201ENST00000375001 XAGE2Q96GT9 111 aa21.78■■□□□ 1.08
COL15A1-201ENST00000375001 ARMT1Q9H993 441 aa21.78■■□□□ 1.08
COL15A1-201ENST00000375001 TPCN1Q9ULQ1 816 aa21.78■■□□□ 1.08
COL15A1-201ENST00000375001 THAP12O43422 761 aa21.78■■□□□ 1.08
COL15A1-201ENST00000375001 GCP02774 474 aa21.78■■□□□ 1.08
COL15A1-201ENST00000375001 ARHGAP44Q17R89 818 aa21.78■■□□□ 1.08
COL15A1-201ENST00000375001 NBPF14Q5TI25 921 aa21.78■■□□□ 1.08
COL15A1-201ENST00000375001 IP6K1Q92551 441 aa21.78■■□□□ 1.08
COL15A1-201ENST00000375001 NUCKS1Q9H1E3 243 aaKnown RBP21.78■■□□□ 1.08
COL15A1-201ENST00000375001 SIRT1Q96EB6 747 aa21.77■■□□□ 1.08
COL15A1-201ENST00000375001 JAG2Q9Y219 1238 aa21.77■■□□□ 1.08
COL15A1-201ENST00000375001 RNF8O76064 485 aa21.77■■□□□ 1.08
COL15A1-201ENST00000375001 ARHGAP4P98171 946 aa21.77■■□□□ 1.08
COL15A1-201ENST00000375001 KLHL29Q96CT2 875 aa21.77■■□□□ 1.08
COL15A1-201ENST00000375001 HAUS4Q9H6D7 363 aa21.77■■□□□ 1.08
COL15A1-201ENST00000375001 INPP1P49441 399 aa21.77■■□□□ 1.08
COL15A1-201ENST00000375001 DCAF5Q96JK2 942 aa21.77■■□□□ 1.08
COL15A1-201ENST00000375001 GUCY2CP25092 1073 aa21.77■■□□□ 1.08
COL15A1-201ENST00000375001 NLRP7Q8WX94 980 aa21.77■■□□□ 1.08
COL15A1-201ENST00000375001 SLC12A2P55011 1212 aa21.76■■□□□ 1.07
COL15A1-201ENST00000375001 ZNF790Q6PG37 636 aa21.76■■□□□ 1.07
COL15A1-201ENST00000375001 PPP1R13BQ96KQ4 1090 aa21.76■■□□□ 1.07
COL15A1-201ENST00000375001 NAP1L4Q99733 375 aaKnown RBP21.76■■□□□ 1.07
COL15A1-201ENST00000375001 MCTP2Q6DN12 878 aa21.76■■□□□ 1.07
COL15A1-201ENST00000375001 TTC6Q86TZ1 520 aa21.76■■□□□ 1.07
COL15A1-201ENST00000375001 KIF24Q5T7B8 1368 aa21.76■■□□□ 1.07
COL15A1-201ENST00000375001 RIC8AQ9NPQ8 531 aa21.76■■□□□ 1.07
COL15A1-201ENST00000375001 BABAM1Q9NWV8 329 aa21.76■■□□□ 1.07
COL15A1-201ENST00000375001 NRBP1Q9UHY1 535 aa21.76■■□□□ 1.07
COL15A1-201ENST00000375001 CDC23Q9UJX2 597 aa21.76■■□□□ 1.07
COL15A1-201ENST00000375001 ACSBG1Q96GR2 724 aa21.76■■□□□ 1.07
COL15A1-201ENST00000375001 USP28Q96RU2 1077 aa21.76■■□□□ 1.07
COL15A1-201ENST00000375001 USP44Q9H0E7 712 aa21.76■■□□□ 1.07
COL15A1-201ENST00000375001 ZNF518AQ6AHZ1 1483 aa21.76■■□□□ 1.07
COL15A1-201ENST00000375001 PSDA5PKW4 1024 aaPredicted RBP21.76■■□□□ 1.07
COL15A1-201ENST00000375001 KCNJ18B7U540 433 aa21.76■■□□□ 1.07
COL15A1-201ENST00000375001 ZMYND10O75800 440 aa21.76■■□□□ 1.07
COL15A1-201ENST00000375001 BCRP11274 1271 aa21.76■■□□□ 1.07
COL15A1-201ENST00000375001 KCNJ12Q14500 433 aa21.76■■□□□ 1.07
COL15A1-201ENST00000375001 FAM133BQ5BKY9 247 aaKnown RBP21.76■■□□□ 1.07
COL15A1-201ENST00000375001 NLRP3Q96P20 1036 aa21.76■■□□□ 1.07
COL15A1-201ENST00000375001 SLC24A3Q9HC58 644 aa21.76■■□□□ 1.07
COL15A1-201ENST00000375001 KCNJ14Q9UNX9 436 aa21.76■■□□□ 1.07
COL15A1-201ENST00000375001 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.75■■□□□ 1.07
COL15A1-201ENST00000375001 SNX29Q8TEQ0 813 aa21.75■■□□□ 1.07
COL15A1-201ENST00000375001 LRWD1Q9UFC0 647 aa21.75■■□□□ 1.07
COL15A1-201ENST00000375001 E7EWF7 191 aa21.75■■□□□ 1.07
COL15A1-201ENST00000375001 SART1O43290 800 aaKnown RBP21.75■■□□□ 1.07
COL15A1-201ENST00000375001 PHBP35232 272 aa21.75■■□□□ 1.07
COL15A1-201ENST00000375001 LSM14BQ9BX40 385 aaKnown RBP21.75■■□□□ 1.07
COL15A1-201ENST00000375001 HOXB7P09629 217 aa21.75■■□□□ 1.07
COL15A1-201ENST00000375001 RCN2Q14257 317 aa21.75■■□□□ 1.07
COL15A1-201ENST00000375001 HAUS3Q68CZ6 603 aa21.75■■□□□ 1.07
COL15A1-201ENST00000375001 EDC4Q6P2E9 1401 aaKnown RBP21.75■■□□□ 1.07
COL15A1-201ENST00000375001 EVI5O60447 810 aa21.75■■□□□ 1.07
COL15A1-201ENST00000375001 MRPL12P52815 198 aaKnown RBP21.75■■□□□ 1.07
COL15A1-201ENST00000375001 SMTNP53814 917 aa21.75■■□□□ 1.07
COL15A1-201ENST00000375001 ZKSCAN8Q15776 578 aaPredicted RBP21.75■■□□□ 1.07
COL15A1-201ENST00000375001 TRPA1O75762 1119 aa21.74■■□□□ 1.07
COL15A1-201ENST00000375001 PLBD2Q8NHP8 589 aa21.74■■□□□ 1.07
COL15A1-201ENST00000375001 A0A0D9SFI3 127 aa21.74■■□□□ 1.07
COL15A1-201ENST00000375001 EXOC3O60645 756 aa21.74■■□□□ 1.07
COL15A1-201ENST00000375001 PFKFB1P16118 471 aa21.74■■□□□ 1.07
COL15A1-201ENST00000375001 PRDM1O75626 825 aa21.74■■□□□ 1.07
COL15A1-201ENST00000375001 HIBCHQ6NVY1 386 aaPredicted RBP21.74■■□□□ 1.07
COL15A1-201ENST00000375001 PDCD7Q8N8D1 485 aaKnown RBP21.74■■□□□ 1.07
COL15A1-201ENST00000375001 EXOC4Q96A65 974 aa21.74■■□□□ 1.07
COL15A1-201ENST00000375001 ADALQ6DHV7 355 aa21.73■■□□□ 1.07
COL15A1-201ENST00000375001 MAEAQ7L5Y9 396 aa21.73■■□□□ 1.07
COL15A1-201ENST00000375001 RSAD2Q8WXG1 361 aa21.73■■□□□ 1.07
COL15A1-201ENST00000375001 FANCLQ9NW38 375 aa21.73■■□□□ 1.07
COL15A1-201ENST00000375001 CUL4BQ13620 913 aa21.73■■□□□ 1.07
COL15A1-201ENST00000375001 RSPH3Q86UC2 560 aa21.73■■□□□ 1.07
COL15A1-201ENST00000375001 TSC22D3Q99576 134 aa21.73■■□□□ 1.07
COL15A1-201ENST00000375001 ADGRL2O95490 1459 aa21.73■■□□□ 1.07
COL15A1-201ENST00000375001 ICE2Q659A1 982 aa21.73■■□□□ 1.07
COL15A1-201ENST00000375001 SSH3Q8TE77 659 aa21.73■■□□□ 1.07
COL15A1-201ENST00000375001 SSH2Q76I76 1423 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms