RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 KCNJ12Q14500 433 aa11.31□□□□□ -0.6
CD28-202ENST00000374481 LONP2Q86WA8 852 aa11.31□□□□□ -0.6
CD28-202ENST00000374481 VPS37DQ86XT2 251 aa11.31□□□□□ -0.6
CD28-202ENST00000374481 TEX9Q8N6V9 391 aa11.31□□□□□ -0.6
CD28-202ENST00000374481 DDX12PQ92771 950 aa11.31□□□□□ -0.6
CD28-202ENST00000374481 DPF2Q92785 391 aa11.31□□□□□ -0.6
CD28-202ENST00000374481 CLIC6Q96NY7 704 aa11.31□□□□□ -0.6
CD28-202ENST00000374481 RMI1Q9H9A7 625 aa11.31□□□□□ -0.6
CD28-202ENST00000374481 INF2Q27J81 1249 aa11.3□□□□□ -0.6
CD28-202ENST00000374481 KRT40Q6A162 431 aa11.3□□□□□ -0.6
CD28-202ENST00000374481 CCNI2Q6ZMN8 369 aaPredicted RBP11.3□□□□□ -0.6
CD28-202ENST00000374481 NME9Q86XW9 330 aa11.3□□□□□ -0.6
CD28-202ENST00000374481 CSGALNACT2Q8N6G5 542 aa11.3□□□□□ -0.6
CD28-202ENST00000374481 PARD3BQ8TEW8 1205 aa11.3□□□□□ -0.6
CD28-202ENST00000374481 TSPYL2Q9H2G4 693 aaPredicted RBP11.3□□□□□ -0.6
CD28-202ENST00000374481 MRPL44Q9H9J2 332 aaKnown RBP11.3□□□□□ -0.6
CD28-202ENST00000374481 TXLNGQ9NUQ3 528 aa11.3□□□□□ -0.6
CD28-202ENST00000374481 POLR3EQ9NVU0 708 aa11.3□□□□□ -0.6
CD28-202ENST00000374481 BSDC1Q9NW68 430 aaPredicted RBP11.3□□□□□ -0.6
CD28-202ENST00000374481 ZFATQ9P243 1243 aa11.3□□□□□ -0.6
CD28-202ENST00000374481 INTUQ9ULD6 942 aa11.3□□□□□ -0.6
CD28-202ENST00000374481 CCND1P24385 295 aa11.3□□□□□ -0.6
CD28-202ENST00000374481 HDLBPQ00341 1268 aaKnown RBP11.3□□□□□ -0.6
CD28-202ENST00000374481 AFAP1Q8N556 730 aa11.3□□□□□ -0.6
CD28-202ENST00000374481 KLHL23Q8NBE8 558 aa11.3□□□□□ -0.6
CD28-202ENST00000374481 GSDMBQ8TAX9 411 aa11.3□□□□□ -0.6
CD28-202ENST00000374481 CYFIP2Q96F07 1278 aa11.3□□□□□ -0.6
CD28-202ENST00000374481 DPH5Q9H2P9 285 aa11.3□□□□□ -0.6
CD28-202ENST00000374481 RHBDL2Q9NX52 303 aa11.3□□□□□ -0.6
CD28-202ENST00000374481 HDAC6Q9UBN7 1215 aa11.3□□□□□ -0.6
CD28-202ENST00000374481 BACH1O14867 736 aa11.3□□□□□ -0.6
CD28-202ENST00000374481 FSBPO95073 299 aa11.3□□□□□ -0.6
CD28-202ENST00000374481 MYBL2P10244 700 aa11.3□□□□□ -0.6
CD28-202ENST00000374481 MYL6BP14649 208 aa11.3□□□□□ -0.6
CD28-202ENST00000374481 ASIC1P78348 528 aa11.3□□□□□ -0.6
CD28-202ENST00000374481 FMR1NBQ8N0W7 255 aaPredicted RBP11.3□□□□□ -0.6
CD28-202ENST00000374481 CEP70Q8NHQ1 597 aa11.3□□□□□ -0.6
CD28-202ENST00000374481 UHMK1Q8TAS1 419 aaKnown RBP11.3□□□□□ -0.6
CD28-202ENST00000374481 NELFBQ8WX92 580 aa11.3□□□□□ -0.6
CD28-202ENST00000374481 STAMQ92783 540 aa11.3□□□□□ -0.6
CD28-202ENST00000374481 STOML1Q9UBI4 398 aa11.3□□□□□ -0.6
CD28-202ENST00000374481 TRAPPC8Q9Y2L5 1435 aa11.3□□□□□ -0.6
CD28-202ENST00000374481 CCDC194A0A1B0GVG4 234 aa11.3□□□□□ -0.6
CD28-202ENST00000374481 BUB1O43683 1085 aa11.3□□□□□ -0.6
CD28-202ENST00000374481 MFSD4BQ5TF39 518 aa11.3□□□□□ -0.6
CD28-202ENST00000374481 ANKRD20A3Q5VUR7 823 aa11.3□□□□□ -0.6
CD28-202ENST00000374481 MAP4K1Q92918 833 aa11.3□□□□□ -0.6
CD28-202ENST00000374481 RAB17Q9H0T7 212 aa11.3□□□□□ -0.6
CD28-202ENST00000374481 EIF2AK4Q9P2K8 1649 aaKnown RBP11.3□□□□□ -0.6
CD28-202ENST00000374481 CASQ2O14958 399 aaPredicted RBP11.29□□□□□ -0.6
CD28-202ENST00000374481 MAP3K7O43318 606 aa11.29□□□□□ -0.6
CD28-202ENST00000374481 TRIM37O94972 964 aa11.29□□□□□ -0.6
CD28-202ENST00000374481 BIRC3Q13489 604 aa11.29□□□□□ -0.6
CD28-202ENST00000374481 GRAMD4Q6IC98 578 aa11.29□□□□□ -0.6
CD28-202ENST00000374481 TMEM154Q6P9G4 183 aa11.29□□□□□ -0.6
CD28-202ENST00000374481 MFN1Q8IWA4 741 aa11.29□□□□□ -0.6
CD28-202ENST00000374481 ST13P4Q8IZP2 240 aaPredicted RBP11.29□□□□□ -0.6
CD28-202ENST00000374481 LMTK3Q96Q04 1460 aa11.29□□□□□ -0.6
CD28-202ENST00000374481 KCNK3O14649 394 aa11.29□□□□□ -0.6
CD28-202ENST00000374481 COPB1P53618 953 aaKnown RBP11.29□□□□□ -0.6
CD28-202ENST00000374481 SLC39A14Q15043 492 aa11.29□□□□□ -0.6
CD28-202ENST00000374481 KIAA0825Q8IV33 1275 aa11.29□□□□□ -0.6
CD28-202ENST00000374481 SNRKQ9NRH2 765 aa11.29□□□□□ -0.6
CD28-202ENST00000374481 ATG3Q9NT62 314 aa11.29□□□□□ -0.6
CD28-202ENST00000374481 MMEP08473 750 aa11.29□□□□□ -0.6
CD28-202ENST00000374481 CCNHP51946 323 aaPredicted RBP11.29□□□□□ -0.6
CD28-202ENST00000374481 PTGISQ16647 500 aa11.29□□□□□ -0.6
CD28-202ENST00000374481 THEMIS2Q5TEJ8 643 aa11.29□□□□□ -0.6
CD28-202ENST00000374481 CFAP61Q8NHU2 1237 aa11.29□□□□□ -0.6
CD28-202ENST00000374481 CHMP6Q96FZ7 201 aa11.29□□□□□ -0.6
CD28-202ENST00000374481 HOMER2Q9NSB8 354 aa11.29□□□□□ -0.6
CD28-202ENST00000374481 MAP3K2Q9Y2U5 619 aa11.29□□□□□ -0.6
CD28-202ENST00000374481 TTC21BQ7Z4L5 1316 aa11.29□□□□□ -0.6
CD28-202ENST00000374481 STAMBPO95630 424 aa11.28□□□□□ -0.6
CD28-202ENST00000374481 ANXA1P04083 346 aa11.28□□□□□ -0.6
CD28-202ENST00000374481 PPP2R2AP63151 447 aa11.28□□□□□ -0.6
CD28-202ENST00000374481 DEUP1Q05D60 604 aa11.28□□□□□ -0.6
CD28-202ENST00000374481 CCDC152Q4G0S7 254 aa11.28□□□□□ -0.6
CD28-202ENST00000374481 NSUN7Q8NE18 718 aaKnown RBP11.28□□□□□ -0.6
CD28-202ENST00000374481 MYCBPAPQ8TBZ2 947 aa11.28□□□□□ -0.6
CD28-202ENST00000374481 IQCDQ96DY2 449 aa11.28□□□□□ -0.6
CD28-202ENST00000374481 DYDC2Q96IM9 177 aa11.28□□□□□ -0.6
CD28-202ENST00000374481 SEC16BQ96JE7 1060 aa11.28□□□□□ -0.6
CD28-202ENST00000374481 MMS19Q96T76 1030 aa11.28□□□□□ -0.6
CD28-202ENST00000374481 PLVAPQ9BX97 442 aa11.28□□□□□ -0.6
CD28-202ENST00000374481 CABP5Q9NP86 173 aa11.28□□□□□ -0.6
CD28-202ENST00000374481 DLGAP2Q9P1A6 1054 aa11.28□□□□□ -0.6
CD28-202ENST00000374481 MCM8Q9UJA3 840 aa11.28□□□□□ -0.6
CD28-202ENST00000374481 RAPGEF1Q13905 1077 aa11.28□□□□□ -0.6
CD28-202ENST00000374481 MORC3Q14149 939 aa11.28□□□□□ -0.6
CD28-202ENST00000374481 RTN1Q16799 776 aa11.28□□□□□ -0.6
CD28-202ENST00000374481 MAP7D3Q8IWC1 876 aa11.28□□□□□ -0.6
CD28-202ENST00000374481 USHBP1Q8N6Y0 703 aa11.28□□□□□ -0.6
CD28-202ENST00000374481 ITFG2Q969R8 447 aa11.28□□□□□ -0.6
CD28-202ENST00000374481 ANKZF1Q9H8Y5 726 aa11.28□□□□□ -0.6
CD28-202ENST00000374481 KRIT1O00522 736 aa11.28□□□□□ -0.6
CD28-202ENST00000374481 KRT14P02533 472 aa11.28□□□□□ -0.6
CD28-202ENST00000374481 PDE6CP51160 858 aa11.28□□□□□ -0.6
CD28-202ENST00000374481 ICA1Q05084 483 aa11.28□□□□□ -0.6
CD28-202ENST00000374481 WDR93Q6P2C0 686 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms