RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 SAMD1Q6SPF0 538 aaPredicted RBP7.32□□□□□ -1.24
CHD6-203ENST00000373233 APPBP2Q92624 585 aa7.32□□□□□ -1.24
CHD6-203ENST00000373233 IQCGQ9H095 443 aaKnown RBP7.32□□□□□ -1.24
CHD6-203ENST00000373233 MKNK2Q9HBH9 465 aa7.32□□□□□ -1.24
CHD6-203ENST00000373233 PLCH1Q4KWH8 1693 aa7.32□□□□□ -1.24
CHD6-203ENST00000373233 FYB2Q5VWT5 728 aa7.32□□□□□ -1.24
CHD6-203ENST00000373233 TTC19Q6DKK2 380 aaPredicted RBP7.32□□□□□ -1.24
CHD6-203ENST00000373233 DHX32Q7L7V1 743 aaKnown RBP7.32□□□□□ -1.24
CHD6-203ENST00000373233 SDCCAG8Q86SQ7 713 aaPredicted RBP7.32□□□□□ -1.24
CHD6-203ENST00000373233 ARHGEF2Q92974 986 aaKnown RBP7.32□□□□□ -1.24
CHD6-203ENST00000373233 NUP98P52948 1817 aa7.32□□□□□ -1.24
CHD6-203ENST00000373233 EIF3CLB5ME19 914 aaKnown RBP7.32□□□□□ -1.24
CHD6-203ENST00000373233 PTPN12Q05209 780 aaKnown RBP7.32□□□□□ -1.24
CHD6-203ENST00000373233 CXorf38Q8TB03 319 aa7.32□□□□□ -1.24
CHD6-203ENST00000373233 EIF3CQ99613 913 aaKnown RBP7.32□□□□□ -1.24
CHD6-203ENST00000373233 NHSL1Q5SYE7 1610 aa7.32□□□□□ -1.24
CHD6-203ENST00000373233 M0R2C6 588 aa7.32□□□□□ -1.24
CHD6-203ENST00000373233 WTAPQ15007 396 aa7.32□□□□□ -1.24
CHD6-203ENST00000373233 SLC4A8Q2Y0W8 1093 aa7.32□□□□□ -1.24
CHD6-203ENST00000373233 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.32□□□□□ -1.24
CHD6-203ENST00000373233 SPDL1Q96EA4 605 aa7.32□□□□□ -1.24
CHD6-203ENST00000373233 YIPF3Q9GZM5 350 aa7.32□□□□□ -1.24
CHD6-203ENST00000373233 TRIM21P19474 475 aaKnown RBP7.32□□□□□ -1.24
CHD6-203ENST00000373233 UBASH3AP57075 661 aa7.32□□□□□ -1.24
CHD6-203ENST00000373233 ARHGAP24Q8N264 748 aa7.32□□□□□ -1.24
CHD6-203ENST00000373233 KAT6AQ92794 2004 aa7.32□□□□□ -1.24
CHD6-203ENST00000373233 RPSAP08865 295 aaKnown RBP7.32□□□□□ -1.24
CHD6-203ENST00000373233 HSPA1LP34931 641 aa7.32□□□□□ -1.24
CHD6-203ENST00000373233 GRAMD4Q6IC98 578 aa7.32□□□□□ -1.24
CHD6-203ENST00000373233 WDR75Q8IWA0 830 aaKnown RBP7.32□□□□□ -1.24
CHD6-203ENST00000373233 MARCH10Q8NA82 808 aaPredicted RBP7.32□□□□□ -1.24
CHD6-203ENST00000373233 SMC1BQ8NDV3 1235 aa7.32□□□□□ -1.24
CHD6-203ENST00000373233 NAPGQ99747 312 aaPredicted RBP7.32□□□□□ -1.24
CHD6-203ENST00000373233 ORC3Q9UBD5 711 aaPredicted RBP7.32□□□□□ -1.24
CHD6-203ENST00000373233 GGA1Q9UJY5 639 aa7.32□□□□□ -1.24
CHD6-203ENST00000373233 APBA3O96018 575 aa7.32□□□□□ -1.24
CHD6-203ENST00000373233 F13A1P00488 732 aa7.32□□□□□ -1.24
CHD6-203ENST00000373233 HSP90AA5PQ58FG0 334 aa7.32□□□□□ -1.24
CHD6-203ENST00000373233 ZNF569Q5MCW4 686 aa7.32□□□□□ -1.24
CHD6-203ENST00000373233 UBLCP1Q8WVY7 318 aaPredicted RBP7.32□□□□□ -1.24
CHD6-203ENST00000373233 HAUS1Q96CS2 278 aa7.32□□□□□ -1.24
CHD6-203ENST00000373233 FGD4Q96M96 766 aa7.32□□□□□ -1.24
CHD6-203ENST00000373233 ISCA1Q9BUE6 129 aa7.32□□□□□ -1.24
CHD6-203ENST00000373233 SRP68Q9UHB9 627 aaKnown RBP7.32□□□□□ -1.24
CHD6-203ENST00000373233 GUCA1BQ9UMX6 200 aa7.32□□□□□ -1.24
CHD6-203ENST00000373233 DONSONQ9NYP3 566 aa7.32□□□□□ -1.24
CHD6-203ENST00000373233 ZNF532Q9HCE3 1301 aa7.31□□□□□ -1.24
CHD6-203ENST00000373233 PLCG2P16885 1265 aa7.31□□□□□ -1.24
CHD6-203ENST00000373233 KIF5AQ12840 1032 aa7.31□□□□□ -1.24
CHD6-203ENST00000373233 PPP1R7Q15435 360 aa7.31□□□□□ -1.24
CHD6-203ENST00000373233 TMCO4Q5TGY1 634 aa7.31□□□□□ -1.24
CHD6-203ENST00000373233 TEX11Q8IYF3 940 aa7.31□□□□□ -1.24
CHD6-203ENST00000373233 ESR2Q92731 530 aa7.31□□□□□ -1.24
CHD6-203ENST00000373233 FAM204AQ9H8W3 233 aa7.31□□□□□ -1.24
CHD6-203ENST00000373233 APOBRQ0VD83 1088 aa7.31□□□□□ -1.24
CHD6-203ENST00000373233 CRACR2BQ8N4Y2 399 aaPredicted RBP7.31□□□□□ -1.24
CHD6-203ENST00000373233 SEC63Q9UGP8 760 aaKnown RBP7.31□□□□□ -1.24
CHD6-203ENST00000373233 PDE6AP16499 860 aa7.31□□□□□ -1.24
CHD6-203ENST00000373233 GUCY2CP25092 1073 aa7.31□□□□□ -1.24
CHD6-203ENST00000373233 PRPF4BQ13523 1007 aaKnown RBP7.31□□□□□ -1.24
CHD6-203ENST00000373233 BCAMP50895 628 aa7.31□□□□□ -1.24
CHD6-203ENST00000373233 ZNF131P52739 623 aa7.31□□□□□ -1.24
CHD6-203ENST00000373233 RPS8P62241 208 aaKnown RBP7.31□□□□□ -1.24
CHD6-203ENST00000373233 CTAGE1Q96RT6 745 aa7.31□□□□□ -1.24
CHD6-203ENST00000373233 ARMT1Q9H993 441 aa7.31□□□□□ -1.24
CHD6-203ENST00000373233 DOT1LQ8TEK3 1739 aa7.31□□□□□ -1.24
CHD6-203ENST00000373233 TXNDC9O14530 226 aa7.31□□□□□ -1.24
CHD6-203ENST00000373233 CHRNDQ07001 517 aa7.31□□□□□ -1.24
CHD6-203ENST00000373233 UIMC1Q96RL1 719 aa7.31□□□□□ -1.24
CHD6-203ENST00000373233 CCDC77Q9BR77 488 aa7.31□□□□□ -1.24
CHD6-203ENST00000373233 ZSCAN16Q9H4T2 348 aaPredicted RBP7.31□□□□□ -1.24
CHD6-203ENST00000373233 ZBTB43O43298 467 aa7.31□□□□□ -1.24
CHD6-203ENST00000373233 HIBADHP31937 336 aaKnown RBP7.31□□□□□ -1.24
CHD6-203ENST00000373233 RTN1Q16799 776 aa7.31□□□□□ -1.24
CHD6-203ENST00000373233 NBPF20Q3BBV1 942 aa7.31□□□□□ -1.24
CHD6-203ENST00000373233 ABCA3Q99758 1704 aa7.31□□□□□ -1.24
CHD6-203ENST00000373233 SASH1O94885 1247 aa7.31□□□□□ -1.24
CHD6-203ENST00000373233 TPD52P55327 224 aaPredicted RBP7.31□□□□□ -1.24
CHD6-203ENST00000373233 SLC30A9Q6PML9 568 aa7.31□□□□□ -1.24
CHD6-203ENST00000373233 ZWINTO95229 277 aa7.31□□□□□ -1.24
CHD6-203ENST00000373233 FOXO4P98177 505 aa7.31□□□□□ -1.24
CHD6-203ENST00000373233 CCDC102BQ68D86 513 aa7.31□□□□□ -1.24
CHD6-203ENST00000373233 CHST3Q7LGC8 479 aa7.31□□□□□ -1.24
CHD6-203ENST00000373233 GJD4Q96KN9 370 aaPredicted RBP7.31□□□□□ -1.24
CHD6-203ENST00000373233 DSCC1Q9BVC3 393 aa7.31□□□□□ -1.24
CHD6-203ENST00000373233 TSC22D4Q9Y3Q8 395 aa7.31□□□□□ -1.24
CHD6-203ENST00000373233 UTYO14607 1347 aa7.31□□□□□ -1.24
CHD6-203ENST00000373233 MYO1BO43795 1136 aa7.3□□□□□ -1.24
CHD6-203ENST00000373233 DRC3Q9H069 523 aa7.3□□□□□ -1.24
CHD6-203ENST00000373233 SEC31BQ9NQW1 1179 aa7.3□□□□□ -1.24
CHD6-203ENST00000373233 SIPA1L3O60292 1781 aaPredicted RBP7.3□□□□□ -1.24
CHD6-203ENST00000373233 KCNQ2O43526 872 aa7.3□□□□□ -1.24
CHD6-203ENST00000373233 PHKA1P46020 1223 aa7.3□□□□□ -1.24
CHD6-203ENST00000373233 SUSD4Q5VX71 490 aa7.3□□□□□ -1.24
CHD6-203ENST00000373233 ZSCAN29Q8IWY8 852 aaPredicted RBP7.3□□□□□ -1.24
CHD6-203ENST00000373233 PLA2G12BQ9BX93 195 aa7.3□□□□□ -1.24
CHD6-203ENST00000373233 MTUS1Q9ULD2 1270 aa7.3□□□□□ -1.24
CHD6-203ENST00000373233 HGSO14964 777 aaPredicted RBP7.3□□□□□ -1.24
CHD6-203ENST00000373233 CHMP2AO43633 222 aa7.3□□□□□ -1.24
CHD6-203ENST00000373233 AKR1B10O60218 316 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms