RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 PAK1Q13153 545 aa15.41■□□□□ 0.06
USP49-201ENST00000373006 MYCBPQ99417 103 aaPredicted RBP15.41■□□□□ 0.06
USP49-201ENST00000373006 ASAP1Q9ULH1 1129 aa15.41■□□□□ 0.06
USP49-201ENST00000373006 LRRC10BA6NIK2 292 aa15.4■□□□□ 0.06
USP49-201ENST00000373006 PLEKHA8P1O95397 391 aa15.4■□□□□ 0.06
USP49-201ENST00000373006 CT47A1Q5JQC4 288 aaPredicted RBP15.4■□□□□ 0.06
USP49-201ENST00000373006 SDR42E1Q8WUS8 393 aa15.4■□□□□ 0.06
USP49-201ENST00000373006 ATRNO75882 1429 aa15.4■□□□□ 0.06
USP49-201ENST00000373006 KIF1AQ12756 1690 aa15.4■□□□□ 0.06
USP49-201ENST00000373006 IRS4O14654 1257 aaPredicted RBP15.4■□□□□ 0.06
USP49-201ENST00000373006 CTSWP56202 376 aa15.4■□□□□ 0.06
USP49-201ENST00000373006 MRPS25P82663 173 aaKnown RBP15.4■□□□□ 0.06
USP49-201ENST00000373006 PPARDQ03181 441 aa15.4■□□□□ 0.06
USP49-201ENST00000373006 STIM1Q13586 685 aa15.4■□□□□ 0.06
USP49-201ENST00000373006 CTR9Q6PD62 1173 aa15.4■□□□□ 0.06
USP49-201ENST00000373006 BANK1Q8NDB2 785 aa15.4■□□□□ 0.06
USP49-201ENST00000373006 ANKRD20A12PQ8NF67 263 aa15.4■□□□□ 0.06
USP49-201ENST00000373006 SMARCC1Q92922 1105 aaPredicted RBP15.4■□□□□ 0.06
USP49-201ENST00000373006 ZNF512BQ96KM6 892 aaPredicted RBP15.4■□□□□ 0.06
USP49-201ENST00000373006 PLA2G12BQ9BX93 195 aa15.4■□□□□ 0.06
USP49-201ENST00000373006 NACAP1Q9BZK3 213 aa15.4■□□□□ 0.06
USP49-201ENST00000373006 AKAP11Q9UKA4 1901 aa15.4■□□□□ 0.06
USP49-201ENST00000373006 GLI3P10071 1580 aa15.4■□□□□ 0.06
USP49-201ENST00000373006 TNKSO95271 1327 aa15.4■□□□□ 0.06
USP49-201ENST00000373006 WDR17Q8IZU2 1322 aa15.4■□□□□ 0.06
USP49-201ENST00000373006 PRPF6O94906 941 aaKnown RBP15.4■□□□□ 0.06
USP49-201ENST00000373006 XBP1P17861 261 aa15.4■□□□□ 0.06
USP49-201ENST00000373006 ARID4AP29374 1257 aaPredicted RBP15.4■□□□□ 0.06
USP49-201ENST00000373006 CORO7P57737 925 aa15.4■□□□□ 0.06
USP49-201ENST00000373006 STAG1Q8WVM7 1258 aa15.4■□□□□ 0.06
USP49-201ENST00000373006 GNL3LQ9NVN8 582 aaKnown RBP15.4■□□□□ 0.06
USP49-201ENST00000373006 TRMT112Q9UI30 125 aaKnown RBP15.4■□□□□ 0.06
USP49-201ENST00000373006 IQSEC3Q9UPP2 1182 aaPredicted RBP15.4■□□□□ 0.06
USP49-201ENST00000373006 DUSP10Q9Y6W6 482 aa15.4■□□□□ 0.06
USP49-201ENST00000373006 TUBBP07437 444 aa15.39■□□□□ 0.05
USP49-201ENST00000373006 UQCRFS1P1P0C7P4 283 aa15.39■□□□□ 0.05
USP49-201ENST00000373006 EVA1CP58658 441 aa15.39■□□□□ 0.05
USP49-201ENST00000373006 TRIM28Q13263 835 aaKnown RBP15.39■□□□□ 0.05
USP49-201ENST00000373006 TTC38Q5R3I4 469 aa15.39■□□□□ 0.05
USP49-201ENST00000373006 OR8K1Q8NGG5 319 aa15.39■□□□□ 0.05
USP49-201ENST00000373006 CAGE1Q8TC20 777 aa15.39■□□□□ 0.05
USP49-201ENST00000373006 PHF20Q9BVI0 1012 aa15.39■□□□□ 0.05
USP49-201ENST00000373006 RWDD2AQ9UIY3 292 aa15.39■□□□□ 0.05
USP49-201ENST00000373006 PPFIA4O75335 1185 aa15.39■□□□□ 0.05
USP49-201ENST00000373006 MCM7P33993 719 aa15.39■□□□□ 0.05
USP49-201ENST00000373006 PRCPP42785 496 aa15.39■□□□□ 0.05
USP49-201ENST00000373006 MNAT1P51948 309 aa15.39■□□□□ 0.05
USP49-201ENST00000373006 HERVK_113P62684 666 aa15.39■□□□□ 0.05
USP49-201ENST00000373006 FERMT2Q96AC1 680 aa15.39■□□□□ 0.05
USP49-201ENST00000373006 LUC7L2Q9Y383 392 aaKnown RBP15.39■□□□□ 0.05
USP49-201ENST00000373006 NLRP10Q86W26 655 aa15.38■□□□□ 0.05
USP49-201ENST00000373006 TMTC2Q8N394 836 aa15.38■□□□□ 0.05
USP49-201ENST00000373006 COG1Q8WTW3 980 aa15.38■□□□□ 0.05
USP49-201ENST00000373006 JAKMIP2Q96AA8 810 aa15.38■□□□□ 0.05
USP49-201ENST00000373006 CRACR2AQ9BSW2 395 aa15.38■□□□□ 0.05
USP49-201ENST00000373006 RNF26Q9BY78 433 aaPredicted RBP15.38■□□□□ 0.05
USP49-201ENST00000373006 MYH7P12883 1935 aa15.38■□□□□ 0.05
USP49-201ENST00000373006 ERVV-2B6SEH9 535 aa15.38■□□□□ 0.05
USP49-201ENST00000373006 PSMD14O00487 310 aa15.38■□□□□ 0.05
USP49-201ENST00000373006 KIAA1328Q86T90 577 aa15.38■□□□□ 0.05
USP49-201ENST00000373006 LACRTQ9GZZ8 138 aa15.38■□□□□ 0.05
USP49-201ENST00000373006 EHD4Q9H223 541 aa15.38■□□□□ 0.05
USP49-201ENST00000373006 RCCD1A6NED2 376 aa15.38■□□□□ 0.05
USP49-201ENST00000373006 PDE2AO00408 941 aaPredicted RBP15.38■□□□□ 0.05
USP49-201ENST00000373006 PARP1P09874 1014 aaKnown RBP15.38■□□□□ 0.05
USP49-201ENST00000373006 PMS1P54277 932 aaKnown RBP15.38■□□□□ 0.05
USP49-201ENST00000373006 PPARAQ07869 468 aa15.38■□□□□ 0.05
USP49-201ENST00000373006 WDR59Q6PJI9 974 aa15.38■□□□□ 0.05
USP49-201ENST00000373006 PIK3AP1Q6ZUJ8 805 aa15.38■□□□□ 0.05
USP49-201ENST00000373006 IRF2BP1Q8IU81 584 aa15.38■□□□□ 0.05
USP49-201ENST00000373006 LPIN2Q92539 896 aa15.38■□□□□ 0.05
USP49-201ENST00000373006 HAUS4Q9H6D7 363 aa15.38■□□□□ 0.05
USP49-201ENST00000373006 JADE2Q9NQC1 790 aa15.38■□□□□ 0.05
USP49-201ENST00000373006 NUP188Q5SRE5 1749 aa15.38■□□□□ 0.05
USP49-201ENST00000373006 BAZ2BQ9UIF8 2168 aaKnown RBP15.37■□□□□ 0.05
USP49-201ENST00000373006 CYP2D7A0A087X1C5 515 aa15.37■□□□□ 0.05
USP49-201ENST00000373006 MACROD2A1Z1Q3 448 aa15.37■□□□□ 0.05
USP49-201ENST00000373006 ADAMTS3O15072 1205 aa15.37■□□□□ 0.05
USP49-201ENST00000373006 AARSP49588 968 aaKnown RBP eCLIP15.37■□□□□ 0.05
USP49-201ENST00000373006 BCAMP50895 628 aa15.37■□□□□ 0.05
USP49-201ENST00000373006 CYP27A1Q02318 531 aa15.37■□□□□ 0.05
USP49-201ENST00000373006 SPAG1Q07617 926 aa15.37■□□□□ 0.05
USP49-201ENST00000373006 PUM3Q15397 648 aaKnown RBP15.37■□□□□ 0.05
USP49-201ENST00000373006 IL17AQ16552 155 aa15.37■□□□□ 0.05
USP49-201ENST00000373006 TSR1Q2NL82 804 aaKnown RBP15.37■□□□□ 0.05
USP49-201ENST00000373006 DNAJC21Q5F1R6 531 aaKnown RBP15.37■□□□□ 0.05
USP49-201ENST00000373006 TTC19Q6DKK2 380 aaPredicted RBP15.37■□□□□ 0.05
USP49-201ENST00000373006 CTCFLQ8NI51 663 aaPredicted RBP15.37■□□□□ 0.05
USP49-201ENST00000373006 PPM1EQ8WY54 764 aa15.37■□□□□ 0.05
USP49-201ENST00000373006 VIPAS39Q9H9C1 493 aa15.37■□□□□ 0.05
USP49-201ENST00000373006 TMOD3Q9NYL9 352 aa15.37■□□□□ 0.05
USP49-201ENST00000373006 PCDH11XQ9BZA7 1347 aa15.37■□□□□ 0.05
USP49-201ENST00000373006 PCDH11YQ9BZA8 1340 aa15.37■□□□□ 0.05
USP49-201ENST00000373006 LAMB4A4D0S4 1761 aa15.37■□□□□ 0.05
USP49-201ENST00000373006 PKD1L3Q7Z443 1732 aa15.37■□□□□ 0.05
USP49-201ENST00000373006 C2orf54Q08AI8 447 aa15.37■□□□□ 0.05
USP49-201ENST00000373006 MAP9Q49MG5 647 aa15.37■□□□□ 0.05
USP49-201ENST00000373006 FKBP15Q5T1M5 1219 aa15.37■□□□□ 0.05
USP49-201ENST00000373006 PLIN2Q99541 437 aa15.37■□□□□ 0.05
USP49-201ENST00000373006 SELENOOQ9BVL4 669 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms