RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 ZNF330Q9Y3S2 320 aaPredicted RBP11.84□□□□□ -0.51
TRERF1-203ENST00000372917 ZCCHC11Q5TAX3 1644 aaKnown RBP11.84□□□□□ -0.51
TRERF1-203ENST00000372917 KRT14P02533 472 aa11.84□□□□□ -0.51
TRERF1-203ENST00000372917 SLC3A2P08195 630 aaKnown RBP11.84□□□□□ -0.51
TRERF1-203ENST00000372917 IL13P35225 146 aa11.84□□□□□ -0.51
TRERF1-203ENST00000372917 CLCN2P51788 898 aa11.84□□□□□ -0.51
TRERF1-203ENST00000372917 ZC3H6P61129 1189 aaKnown RBP11.84□□□□□ -0.51
TRERF1-203ENST00000372917 CDC37Q16543 378 aaPredicted RBP11.84□□□□□ -0.51
TRERF1-203ENST00000372917 TMEM154Q6P9G4 183 aa11.84□□□□□ -0.51
TRERF1-203ENST00000372917 RMDN2Q96LZ7 410 aa11.84□□□□□ -0.51
TRERF1-203ENST00000372917 CENPOQ9BU64 300 aa11.84□□□□□ -0.51
TRERF1-203ENST00000372917 KIAA1468Q9P260 1216 aa11.84□□□□□ -0.51
TRERF1-203ENST00000372917 ITM2BQ9Y287 266 aa11.84□□□□□ -0.51
TRERF1-203ENST00000372917 NR1D1P20393 614 aa11.83□□□□□ -0.52
TRERF1-203ENST00000372917 STAT6P42226 847 aa11.83□□□□□ -0.52
TRERF1-203ENST00000372917 LONRF3Q496Y0 759 aa11.83□□□□□ -0.52
TRERF1-203ENST00000372917 C6orf89Q6UWU4 347 aa11.83□□□□□ -0.52
TRERF1-203ENST00000372917 CNTROBQ8N137 903 aa11.83□□□□□ -0.52
TRERF1-203ENST00000372917 SNRNP27Q8WVK2 155 aaKnown RBP11.83□□□□□ -0.52
TRERF1-203ENST00000372917 SPIRE2Q8WWL2 714 aa11.83□□□□□ -0.52
TRERF1-203ENST00000372917 ERCC6L2Q5T890 1561 aa11.83□□□□□ -0.52
TRERF1-203ENST00000372917 NCKAP5LQ9HCH0 1330 aa11.83□□□□□ -0.52
TRERF1-203ENST00000372917 ENC1O14682 589 aa11.83□□□□□ -0.52
TRERF1-203ENST00000372917 NLRP6P59044 892 aa11.83□□□□□ -0.52
TRERF1-203ENST00000372917 BPIFB4P59827 614 aa11.83□□□□□ -0.52
TRERF1-203ENST00000372917 MRPS25P82663 173 aaKnown RBP11.83□□□□□ -0.52
TRERF1-203ENST00000372917 AGAP3Q96P47 875 aa11.83□□□□□ -0.52
TRERF1-203ENST00000372917 ASXL2Q76L83 1435 aa11.83□□□□□ -0.52
TRERF1-203ENST00000372917 CCNI2Q6ZMN8 369 aaPredicted RBP11.83□□□□□ -0.52
TRERF1-203ENST00000372917 MAATS1Q7Z4T9 603 aa11.83□□□□□ -0.52
TRERF1-203ENST00000372917 IQCF2Q8IXL9 164 aa11.83□□□□□ -0.52
TRERF1-203ENST00000372917 SPICE1Q8N0Z3 855 aa11.83□□□□□ -0.52
TRERF1-203ENST00000372917 CLASRPQ8N2M8 674 aaKnown RBP11.83□□□□□ -0.52
TRERF1-203ENST00000372917 NUDT16Q96DE0 195 aaKnown RBP11.83□□□□□ -0.52
TRERF1-203ENST00000372917 PAGR1Q9BTK6 254 aa11.83□□□□□ -0.52
TRERF1-203ENST00000372917 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.83□□□□□ -0.52
TRERF1-203ENST00000372917 DLGAP2Q9P1A6 1054 aa11.83□□□□□ -0.52
TRERF1-203ENST00000372917 FRMD4BQ9Y2L6 1034 aa11.83□□□□□ -0.52
TRERF1-203ENST00000372917 IFT172Q9UG01 1749 aa11.83□□□□□ -0.52
TRERF1-203ENST00000372917 ZC3H13Q5T200 1668 aaKnown RBP11.83□□□□□ -0.52
TRERF1-203ENST00000372917 NDUFB5O43674 189 aa11.82□□□□□ -0.52
TRERF1-203ENST00000372917 RHBDL3P58872 404 aa11.82□□□□□ -0.52
TRERF1-203ENST00000372917 ST3GAL1Q11201 340 aa11.82□□□□□ -0.52
TRERF1-203ENST00000372917 ADAM9Q13443 819 aa11.82□□□□□ -0.52
TRERF1-203ENST00000372917 IMMTQ16891 758 aaKnown RBP11.82□□□□□ -0.52
TRERF1-203ENST00000372917 BICDL1Q6ZP65 573 aa11.82□□□□□ -0.52
TRERF1-203ENST00000372917 CPLX4Q7Z7G2 160 aa11.82□□□□□ -0.52
TRERF1-203ENST00000372917 TEX9Q8N6V9 391 aa11.82□□□□□ -0.52
TRERF1-203ENST00000372917 FAM184BQ9ULE4 1060 aa11.82□□□□□ -0.52
TRERF1-203ENST00000372917 WDR37Q9Y2I8 494 aa11.82□□□□□ -0.52
TRERF1-203ENST00000372917 PPRC1Q5VV67 1664 aaKnown RBP11.82□□□□□ -0.52
TRERF1-203ENST00000372917 RFC5P40937 340 aa11.82□□□□□ -0.52
TRERF1-203ENST00000372917 GBP7Q8N8V2 638 aaPredicted RBP11.82□□□□□ -0.52
TRERF1-203ENST00000372917 ATP10DQ9P241 1426 aa11.82□□□□□ -0.52
TRERF1-203ENST00000372917 SRGAP2O75044 1071 aa11.82□□□□□ -0.52
TRERF1-203ENST00000372917 MDH1P40925 334 aaKnown RBP11.82□□□□□ -0.52
TRERF1-203ENST00000372917 P3H1Q32P28 736 aa11.82□□□□□ -0.52
TRERF1-203ENST00000372917 ADCK5Q3MIX3 580 aa11.82□□□□□ -0.52
TRERF1-203ENST00000372917 ERICH1Q86X53 443 aa11.82□□□□□ -0.52
TRERF1-203ENST00000372917 PRCCQ92733 491 aaPredicted RBP11.82□□□□□ -0.52
TRERF1-203ENST00000372917 BRF1Q92994 677 aa11.82□□□□□ -0.52
TRERF1-203ENST00000372917 SEC16BQ96JE7 1060 aa11.82□□□□□ -0.52
TRERF1-203ENST00000372917 STK38LQ9Y2H1 464 aa11.82□□□□□ -0.52
TRERF1-203ENST00000372917 TMCC1O94876 653 aa11.81□□□□□ -0.52
TRERF1-203ENST00000372917 PI16Q6UXB8 463 aa11.81□□□□□ -0.52
TRERF1-203ENST00000372917 TC2NQ8N9U0 490 aa11.81□□□□□ -0.52
TRERF1-203ENST00000372917 CNKSR1Q969H4 720 aa11.81□□□□□ -0.52
TRERF1-203ENST00000372917 L3MBTL3Q96JM7 780 aaPredicted RBP11.81□□□□□ -0.52
TRERF1-203ENST00000372917 RPS6KC1Q96S38 1066 aa11.81□□□□□ -0.52
TRERF1-203ENST00000372917 SLF1Q9BQI6 1058 aa11.81□□□□□ -0.52
TRERF1-203ENST00000372917 UBA5Q9GZZ9 404 aa11.81□□□□□ -0.52
TRERF1-203ENST00000372917 CWC25Q9NXE8 425 aaPredicted RBP11.81□□□□□ -0.52
TRERF1-203ENST00000372917 TUBGCP4Q9UGJ1 667 aa11.81□□□□□ -0.52
TRERF1-203ENST00000372917 CHMP2BQ9UQN3 213 aa11.81□□□□□ -0.52
TRERF1-203ENST00000372917 ADGRG1Q9Y653 693 aa11.81□□□□□ -0.52
TRERF1-203ENST00000372917 CCDC61Q9Y6R9 512 aa11.81□□□□□ -0.52
TRERF1-203ENST00000372917 LMTK2Q8IWU2 1503 aa11.81□□□□□ -0.52
TRERF1-203ENST00000372917 NCAPHQ15003 741 aa11.81□□□□□ -0.52
TRERF1-203ENST00000372917 KIAA0753Q2KHM9 967 aa11.81□□□□□ -0.52
TRERF1-203ENST00000372917 ZNF365Q70YC5 407 aa11.81□□□□□ -0.52
TRERF1-203ENST00000372917 C14orf80Q86SX3 495 aa11.81□□□□□ -0.52
TRERF1-203ENST00000372917 MMS19Q96T76 1030 aa11.81□□□□□ -0.52
TRERF1-203ENST00000372917 SYT15Q9BQS2 421 aa11.81□□□□□ -0.52
TRERF1-203ENST00000372917 DNAJC8O75937 253 aaPredicted RBP11.81□□□□□ -0.52
TRERF1-203ENST00000372917 USP46P62068 366 aa11.81□□□□□ -0.52
TRERF1-203ENST00000372917 MRPS35P82673 323 aaKnown RBP11.81□□□□□ -0.52
TRERF1-203ENST00000372917 ZMYM1Q5SVZ6 1142 aa11.81□□□□□ -0.52
TRERF1-203ENST00000372917 CCDC102BQ68D86 513 aa11.81□□□□□ -0.52
TRERF1-203ENST00000372917 LEMD3Q9Y2U8 911 aa11.81□□□□□ -0.52
TRERF1-203ENST00000372917 NPTXRO95502 500 aa11.8□□□□□ -0.52
TRERF1-203ENST00000372917 ATP2A2P16615 1042 aaKnown RBP11.8□□□□□ -0.52
TRERF1-203ENST00000372917 ZFXP17010 805 aaPredicted RBP11.8□□□□□ -0.52
TRERF1-203ENST00000372917 MATR3P43243 847 aaKnown RBP eCLIP11.8□□□□□ -0.52
TRERF1-203ENST00000372917 NLRP12P59046 1061 aa11.8□□□□□ -0.52
TRERF1-203ENST00000372917 FAM133BQ5BKY9 247 aaKnown RBP11.8□□□□□ -0.52
TRERF1-203ENST00000372917 KIFAP3Q92845 792 aa11.8□□□□□ -0.52
TRERF1-203ENST00000372917 ARHGEF10LQ9HCE6 1279 aa11.8□□□□□ -0.52
TRERF1-203ENST00000372917 GGA2Q9UJY4 613 aa11.8□□□□□ -0.52
TRERF1-203ENST00000372917 GMNCA6NCL1 334 aa11.8□□□□□ -0.52
TRERF1-203ENST00000372917 ODF2Q5BJF6 829 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms