RNA–Protein interactions for RNA: ENST00000372396.3

KDM4A-201, Transcript of lysine demethylase 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4A, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-201ENST00000372396 USP28Q96RU2 1077 aa11.28□□□□□ -0.6
KDM4A-201ENST00000372396 ZCCHC17Q9NP64 241 aaKnown RBP11.28□□□□□ -0.6
KDM4A-201ENST00000372396 FGFR1OPO95684 399 aaKnown RBP11.27□□□□□ -0.6
KDM4A-201ENST00000372396 IFNAR1P17181 557 aa11.27□□□□□ -0.6
KDM4A-201ENST00000372396 INPP5BP32019 993 aa11.27□□□□□ -0.6
KDM4A-201ENST00000372396 STAT6P42226 847 aa11.27□□□□□ -0.6
KDM4A-201ENST00000372396 ZHX3Q9H4I2 956 aa11.27□□□□□ -0.6
KDM4A-201ENST00000372396 SH2D4AQ9H788 454 aa11.27□□□□□ -0.6
KDM4A-201ENST00000372396 LRRC37A3O60309 1634 aa11.27□□□□□ -0.61
KDM4A-201ENST00000372396 TBC1D10CQ8IV04 446 aa11.27□□□□□ -0.61
KDM4A-201ENST00000372396 PNMA1Q8ND90 353 aa11.27□□□□□ -0.61
KDM4A-201ENST00000372396 RTEL1Q9NZ71 1219 aa11.27□□□□□ -0.61
KDM4A-201ENST00000372396 ODF2LQ9ULJ1 636 aa11.27□□□□□ -0.61
KDM4A-201ENST00000372396 TUBB4AP04350 444 aa11.27□□□□□ -0.61
KDM4A-201ENST00000372396 PSMD2Q13200 908 aa11.27□□□□□ -0.61
KDM4A-201ENST00000372396 TTC38Q5R3I4 469 aa11.27□□□□□ -0.61
KDM4A-201ENST00000372396 KCNF1Q9H3M0 494 aa11.27□□□□□ -0.61
KDM4A-201ENST00000372396 TOP1P11387 765 aaKnown RBP11.27□□□□□ -0.61
KDM4A-201ENST00000372396 ELF1P32519 619 aa11.27□□□□□ -0.61
KDM4A-201ENST00000372396 EXOSC10Q01780 885 aaKnown RBP11.27□□□□□ -0.61
KDM4A-201ENST00000372396 DTHD1Q6ZMT9 781 aa11.27□□□□□ -0.61
KDM4A-201ENST00000372396 IQUBQ8NA54 791 aa11.27□□□□□ -0.61
KDM4A-201ENST00000372396 PRPF38AQ8NAV1 312 aaKnown RBP11.27□□□□□ -0.61
KDM4A-201ENST00000372396 ARMC2Q8NEN0 867 aa11.27□□□□□ -0.61
KDM4A-201ENST00000372396 FERMT2Q96AC1 680 aa11.27□□□□□ -0.61
KDM4A-201ENST00000372396 CRAMP1Q96RY5 1269 aa11.27□□□□□ -0.61
KDM4A-201ENST00000372396 KCNH3Q9ULD8 1083 aa11.27□□□□□ -0.61
KDM4A-201ENST00000372396 KCNJ14Q9UNX9 436 aa11.27□□□□□ -0.61
KDM4A-201ENST00000372396 PHRF1Q9P1Y6 1649 aaKnown RBP11.26□□□□□ -0.61
KDM4A-201ENST00000372396 MCM7P33993 719 aa11.26□□□□□ -0.61
KDM4A-201ENST00000372396 PEX19P40855 299 aa11.26□□□□□ -0.61
KDM4A-201ENST00000372396 MRPL12P52815 198 aaKnown RBP11.26□□□□□ -0.61
KDM4A-201ENST00000372396 DOK7Q18PE1 504 aa11.26□□□□□ -0.61
KDM4A-201ENST00000372396 KRT25Q7Z3Z0 450 aa11.26□□□□□ -0.61
KDM4A-201ENST00000372396 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.26□□□□□ -0.61
KDM4A-201ENST00000372396 NIM1KQ8IY84 436 aa11.26□□□□□ -0.61
KDM4A-201ENST00000372396 ITFG2Q969R8 447 aa11.26□□□□□ -0.61
KDM4A-201ENST00000372396 SLC4A9Q96Q91 983 aa11.26□□□□□ -0.61
KDM4A-201ENST00000372396 TSG101Q99816 390 aa11.26□□□□□ -0.61
KDM4A-201ENST00000372396 GSG1L2A8MUP6 293 aa11.26□□□□□ -0.61
KDM4A-201ENST00000372396 CAND2O75155 1236 aa11.26□□□□□ -0.61
KDM4A-201ENST00000372396 RESTQ13127 1097 aa11.26□□□□□ -0.61
KDM4A-201ENST00000372396 GALNT17Q6IS24 598 aa11.26□□□□□ -0.61
KDM4A-201ENST00000372396 ARMCX6Q7L4S7 300 aa11.26□□□□□ -0.61
KDM4A-201ENST00000372396 DHX58Q96C10 678 aa11.26□□□□□ -0.61
KDM4A-201ENST00000372396 CD209Q9NNX6 404 aa11.26□□□□□ -0.61
KDM4A-201ENST00000372396 SWAP70Q9UH65 585 aa11.26□□□□□ -0.61
KDM4A-201ENST00000372396 A0A1W2PQ27 194 aa11.26□□□□□ -0.61
KDM4A-201ENST00000372396 A0A1W2PQ64 194 aa11.26□□□□□ -0.61
KDM4A-201ENST00000372396 A0A1W2PQD8 194 aa11.26□□□□□ -0.61
KDM4A-201ENST00000372396 CORO7P57737 925 aa11.26□□□□□ -0.61
KDM4A-201ENST00000372396 PRR5LQ6MZQ0 368 aa11.26□□□□□ -0.61
KDM4A-201ENST00000372396 AOPEPQ8N6M6 819 aa11.26□□□□□ -0.61
KDM4A-201ENST00000372396 ERMNQ8TAM6 284 aa11.26□□□□□ -0.61
KDM4A-201ENST00000372396 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.26□□□□□ -0.617e-7■■■■□ 23
KDM4A-201ENST00000372396 ZNF174Q15697 407 aa11.25□□□□□ -0.61
KDM4A-201ENST00000372396 PIK3AP1Q6ZUJ8 805 aa11.25□□□□□ -0.61
KDM4A-201ENST00000372396 STOX1Q6ZVD7 989 aa11.25□□□□□ -0.61
KDM4A-201ENST00000372396 CHAMP1Q96JM3 812 aa11.25□□□□□ -0.61
KDM4A-201ENST00000372396 VPS54Q9P1Q0 977 aa11.25□□□□□ -0.61
KDM4A-201ENST00000372396 TRPM3Q9HCF6 1732 aaPredicted RBP11.25□□□□□ -0.61
KDM4A-201ENST00000372396 SEC31AO94979 1220 aaKnown RBP11.25□□□□□ -0.61
KDM4A-201ENST00000372396 RBM26Q5T8P6 1007 aaKnown RBP11.25□□□□□ -0.61
KDM4A-201ENST00000372396 SP8Q8IXZ3 490 aa11.25□□□□□ -0.61
KDM4A-201ENST00000372396 ARHGEF10LQ9HCE6 1279 aa11.25□□□□□ -0.61
KDM4A-201ENST00000372396 POLR3EQ9NVU0 708 aa11.25□□□□□ -0.61
KDM4A-201ENST00000372396 ALS2Q96Q42 1657 aa11.25□□□□□ -0.61
KDM4A-201ENST00000372396 ZNF202O95125 648 aa11.25□□□□□ -0.61
KDM4A-201ENST00000372396 SCG2P13521 617 aa11.25□□□□□ -0.61
KDM4A-201ENST00000372396 FGFR2P21802 821 aa11.25□□□□□ -0.61
KDM4A-201ENST00000372396 AFMP43652 599 aa11.25□□□□□ -0.61
KDM4A-201ENST00000372396 EVCP57679 992 aa11.25□□□□□ -0.61
KDM4A-201ENST00000372396 RRAGBQ5VZM2 374 aa11.25□□□□□ -0.61
KDM4A-201ENST00000372396 SMARCC2Q8TAQ2 1214 aa11.25□□□□□ -0.61
KDM4A-201ENST00000372396 GBP3Q9H0R5 595 aa11.25□□□□□ -0.61
KDM4A-201ENST00000372396 FOXP1Q9H334 677 aaPredicted RBP11.25□□□□□ -0.61
KDM4A-201ENST00000372396 DNAI1Q9UI46 699 aa11.25□□□□□ -0.61
KDM4A-201ENST00000372396 STK36Q9NRP7 1315 aa11.25□□□□□ -0.61
KDM4A-201ENST00000372396 PRDX5P30044 214 aa11.25□□□□□ -0.61
KDM4A-201ENST00000372396 PLA2G4AP47712 749 aa11.25□□□□□ -0.61
KDM4A-201ENST00000372396 GSCP56915 257 aaPredicted RBP11.25□□□□□ -0.61
KDM4A-201ENST00000372396 CCDC150Q8NCX0 1101 aa11.25□□□□□ -0.61
KDM4A-201ENST00000372396 CCDC17Q96LX7 622 aa11.25□□□□□ -0.61
KDM4A-201ENST00000372396 GPCPD1Q9NPB8 672 aa11.25□□□□□ -0.61
KDM4A-201ENST00000372396 RCOR1Q9UKL0 485 aa11.25□□□□□ -0.61
KDM4A-201ENST00000372396 NEDD4P46934 1319 aa11.24□□□□□ -0.61
KDM4A-201ENST00000372396 SPAG1Q07617 926 aa11.24□□□□□ -0.61
KDM4A-201ENST00000372396 DLGAP5Q15398 846 aa11.24□□□□□ -0.61
KDM4A-201ENST00000372396 ISM2Q6H9L7 571 aa11.24□□□□□ -0.61
KDM4A-201ENST00000372396 FBXO33Q7Z6M2 555 aa11.24□□□□□ -0.61
KDM4A-201ENST00000372396 FAM177A1Q8N128 213 aaPredicted RBP11.24□□□□□ -0.61
KDM4A-201ENST00000372396 ZDHHC9Q9Y397 364 aa11.24□□□□□ -0.61
KDM4A-201ENST00000372396 FHOD1Q9Y613 1164 aa11.24□□□□□ -0.61
KDM4A-201ENST00000372396 CMA1P23946 247 aa11.24□□□□□ -0.61
KDM4A-201ENST00000372396 RWDD2BP57060 319 aa11.24□□□□□ -0.61
KDM4A-201ENST00000372396 KIF23Q02241 960 aaPredicted RBP11.24□□□□□ -0.61
KDM4A-201ENST00000372396 NONOQ15233 471 aaKnown RBP eCLIP11.24□□□□□ -0.61
KDM4A-201ENST00000372396 FAM114A1Q8IWE2 563 aa11.24□□□□□ -0.61
KDM4A-201ENST00000372396 ETAA1Q9NY74 926 aa11.24□□□□□ -0.61
KDM4A-201ENST00000372396 PSD3Q9NYI0 1048 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms