RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 CCDC42Q96M95 316 aa12.4□□□□□ -0.43
NECTIN4-201ENST00000368012 FOXP1Q9H334 677 aaPredicted RBP12.4□□□□□ -0.43
NECTIN4-201ENST00000368012 SMARCAL1Q9NZC9 954 aa12.4□□□□□ -0.43
NECTIN4-201ENST00000368012 TTF2Q9UNY4 1162 aaKnown RBP12.4□□□□□ -0.43
NECTIN4-201ENST00000368012 CHD2O14647 1828 aaKnown RBP12.39□□□□□ -0.43
NECTIN4-201ENST00000368012 TULP2O00295 520 aa12.39□□□□□ -0.43
NECTIN4-201ENST00000368012 ATP2C2O75185 946 aa12.39□□□□□ -0.43
NECTIN4-201ENST00000368012 GYPCP04921 128 aa12.39□□□□□ -0.43
NECTIN4-201ENST00000368012 ACTN2P35609 894 aa12.39□□□□□ -0.43
NECTIN4-201ENST00000368012 C2orf54Q08AI8 447 aa12.39□□□□□ -0.43
NECTIN4-201ENST00000368012 INF2Q27J81 1249 aa12.39□□□□□ -0.43
NECTIN4-201ENST00000368012 CACNA2D4Q7Z3S7 1137 aa12.39□□□□□ -0.43
NECTIN4-201ENST00000368012 JAKMIP2Q96AA8 810 aa12.39□□□□□ -0.43
NECTIN4-201ENST00000368012 ISCA1Q9BUE6 129 aa12.39□□□□□ -0.43
NECTIN4-201ENST00000368012 BCCIPQ9P287 314 aaKnown RBP eCLIP12.39□□□□□ -0.43
NECTIN4-201ENST00000368012 CYP2D6P10635 497 aa12.39□□□□□ -0.43
NECTIN4-201ENST00000368012 FCHSD1Q86WN1 690 aa12.39□□□□□ -0.43
NECTIN4-201ENST00000368012 ZSCAN10Q96SZ4 725 aaPredicted RBP12.39□□□□□ -0.43
NECTIN4-201ENST00000368012 KAT14Q9H8E8 782 aa12.39□□□□□ -0.43
NECTIN4-201ENST00000368012 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.39□□□□□ -0.43
NECTIN4-201ENST00000368012 BTG4Q9NY30 223 aa12.39□□□□□ -0.43
NECTIN4-201ENST00000368012 RNF225M0QZC1 329 aaPredicted RBP12.38□□□□□ -0.43
NECTIN4-201ENST00000368012 ACTN4O43707 911 aaKnown RBP12.38□□□□□ -0.43
NECTIN4-201ENST00000368012 ATP6V1AP38606 617 aa12.38□□□□□ -0.43
NECTIN4-201ENST00000368012 ATP1A2P50993 1020 aa12.38□□□□□ -0.43
NECTIN4-201ENST00000368012 DTHD1Q6ZMT9 781 aa12.38□□□□□ -0.43
NECTIN4-201ENST00000368012 KRT26Q7Z3Y9 468 aa12.38□□□□□ -0.43
NECTIN4-201ENST00000368012 TMEM139Q8IV31 216 aa12.38□□□□□ -0.43
NECTIN4-201ENST00000368012 SAP30BPQ9UHR5 308 aaKnown RBP12.38□□□□□ -0.43
NECTIN4-201ENST00000368012 SAR1BQ9Y6B6 198 aa12.38□□□□□ -0.43
NECTIN4-201ENST00000368012 DUSP10Q9Y6W6 482 aa12.38□□□□□ -0.43
NECTIN4-201ENST00000368012 CPDO75976 1380 aa12.38□□□□□ -0.43
NECTIN4-201ENST00000368012 TTC26A0AVF1 554 aa12.38□□□□□ -0.43
NECTIN4-201ENST00000368012 PSMA7O14818 248 aa12.38□□□□□ -0.43
NECTIN4-201ENST00000368012 RNF40O75150 1001 aa12.38□□□□□ -0.43
NECTIN4-201ENST00000368012 LIFRP42702 1097 aa12.38□□□□□ -0.43
NECTIN4-201ENST00000368012 KLK7P49862 253 aa12.38□□□□□ -0.43
NECTIN4-201ENST00000368012 PDE4DQ08499 809 aa12.38□□□□□ -0.43
NECTIN4-201ENST00000368012 KIF5AQ12840 1032 aa12.38□□□□□ -0.43
NECTIN4-201ENST00000368012 OR8K1Q8NGG5 319 aa12.38□□□□□ -0.43
NECTIN4-201ENST00000368012 MED15Q96RN5 788 aa12.38□□□□□ -0.43
NECTIN4-201ENST00000368012 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.38□□□□□ -0.43
NECTIN4-201ENST00000368012 TBC1D7Q9P0N9 293 aa12.38□□□□□ -0.43
NECTIN4-201ENST00000368012 MAP3K15Q6ZN16 1313 aa12.38□□□□□ -0.43
NECTIN4-201ENST00000368012 KRT86O43790 486 aa12.38□□□□□ -0.43
NECTIN4-201ENST00000368012 RPN1P04843 607 aaKnown RBP12.38□□□□□ -0.43
NECTIN4-201ENST00000368012 PARP1P09874 1014 aaKnown RBP12.38□□□□□ -0.43
NECTIN4-201ENST00000368012 ERCC5P28715 1186 aaPredicted RBP12.38□□□□□ -0.43
NECTIN4-201ENST00000368012 PRCPP42785 496 aa12.38□□□□□ -0.43
NECTIN4-201ENST00000368012 AFAP1L1Q8TED9 768 aa12.38□□□□□ -0.43
NECTIN4-201ENST00000368012 NLRC4Q9NPP4 1024 aa12.38□□□□□ -0.43
NECTIN4-201ENST00000368012 ABHD10Q9NUJ1 306 aa12.38□□□□□ -0.43
NECTIN4-201ENST00000368012 SAMM50Q9Y512 469 aa12.38□□□□□ -0.43
NECTIN4-201ENST00000368012 POTEB2H3BUK9 544 aa12.37□□□□□ -0.43
NECTIN4-201ENST00000368012 BUB1O43683 1085 aa12.37□□□□□ -0.43
NECTIN4-201ENST00000368012 ATP1A1P05023 1023 aaKnown RBP12.37□□□□□ -0.43
NECTIN4-201ENST00000368012 LIG3P49916 1009 aa12.37□□□□□ -0.43
NECTIN4-201ENST00000368012 ERVK-24P63145 666 aa12.37□□□□□ -0.43
NECTIN4-201ENST00000368012 DPYDQ12882 1025 aa12.37□□□□□ -0.43
NECTIN4-201ENST00000368012 ENAHQ8N8S7 591 aaPredicted RBP12.37□□□□□ -0.43
NECTIN4-201ENST00000368012 NOC4LQ9BVI4 516 aaKnown RBP12.37□□□□□ -0.43
NECTIN4-201ENST00000368012 ADD3Q9UEY8 706 aaKnown RBP12.37□□□□□ -0.43
NECTIN4-201ENST00000368012 LMO7Q8WWI1 1683 aa12.37□□□□□ -0.43
NECTIN4-201ENST00000368012 OVOS2A0A0G2JMS6 1433 aa12.37□□□□□ -0.43
NECTIN4-201ENST00000368012 LOC102724159A0A0B4J2E5 919 aa12.37□□□□□ -0.43
NECTIN4-201ENST00000368012 NUTM2BA6NNL0 878 aaPredicted RBP12.37□□□□□ -0.43
NECTIN4-201ENST00000368012 NUTM2EB1AL46 878 aaPredicted RBP12.37□□□□□ -0.43
NECTIN4-201ENST00000368012 ERVV-2B6SEH9 535 aa12.37□□□□□ -0.43
NECTIN4-201ENST00000368012 CHRNDQ07001 517 aa12.37□□□□□ -0.43
NECTIN4-201ENST00000368012 PWP2Q15269 919 aaKnown RBP12.37□□□□□ -0.43
NECTIN4-201ENST00000368012 RNF187Q5TA31 235 aaPredicted RBP12.37□□□□□ -0.43
NECTIN4-201ENST00000368012 SUSD4Q5VX71 490 aa12.37□□□□□ -0.43
NECTIN4-201ENST00000368012 DZIP1Q86YF9 867 aaKnown RBP12.37□□□□□ -0.43
NECTIN4-201ENST00000368012 C2CD5Q86YS7 1000 aa12.37□□□□□ -0.43
NECTIN4-201ENST00000368012 KIFC2Q96AC6 838 aa12.37□□□□□ -0.43
NECTIN4-201ENST00000368012 MMS19Q96T76 1030 aa12.37□□□□□ -0.43
NECTIN4-201ENST00000368012 ANKZF1Q9H8Y5 726 aa12.37□□□□□ -0.43
NECTIN4-201ENST00000368012 A0A1B0GTH6 734 aa12.37□□□□□ -0.43
NECTIN4-201ENST00000368012 NDUFA10O95299 355 aa12.37□□□□□ -0.43
NECTIN4-201ENST00000368012 EIF6P56537 245 aaKnown RBP12.37□□□□□ -0.43
NECTIN4-201ENST00000368012 MAP9Q49MG5 647 aa12.37□□□□□ -0.43
NECTIN4-201ENST00000368012 CCDC152Q4G0S7 254 aa12.37□□□□□ -0.43
NECTIN4-201ENST00000368012 CADPS2Q86UW7 1296 aa12.37□□□□□ -0.43
NECTIN4-201ENST00000368012 GOLGA5Q8TBA6 731 aa12.37□□□□□ -0.43
NECTIN4-201ENST00000368012 SLC39A2Q9NP94 309 aa12.37□□□□□ -0.43
NECTIN4-201ENST00000368012 ATG3Q9NT62 314 aa12.37□□□□□ -0.43
NECTIN4-201ENST00000368012 FAM53CQ9NYF3 392 aa12.37□□□□□ -0.43
NECTIN4-201ENST00000368012 TACC3Q9Y6A5 838 aa12.37□□□□□ -0.43
NECTIN4-201ENST00000368012 MRC1P22897 1456 aa12.37□□□□□ -0.43
NECTIN4-201ENST00000368012 EXOC5O00471 708 aa12.36□□□□□ -0.43
NECTIN4-201ENST00000368012 CCT5P48643 541 aa12.36□□□□□ -0.43
NECTIN4-201ENST00000368012 SPAG1Q07617 926 aa12.36□□□□□ -0.43
NECTIN4-201ENST00000368012 HLTFQ14527 1009 aaKnown RBP eCLIP12.36□□□□□ -0.43
NECTIN4-201ENST00000368012 PANX2Q96RD6 677 aa12.36□□□□□ -0.43
NECTIN4-201ENST00000368012 KANSL2Q9H9L4 492 aa12.36□□□□□ -0.43
NECTIN4-201ENST00000368012 TCP11L1Q9NUJ3 509 aa12.36□□□□□ -0.43
NECTIN4-201ENST00000368012 AGPAT5Q9NUQ2 364 aa12.36□□□□□ -0.43
NECTIN4-201ENST00000368012 EXOC1Q9NV70 894 aa12.36□□□□□ -0.43
NECTIN4-201ENST00000368012 CYLC1P35663 651 aaPredicted RBP12.36□□□□□ -0.43
NECTIN4-201ENST00000368012 EPS15P42566 896 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 204.1 ms