RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 AATFQ9NY61 560 aaKnown RBP eCLIP15.34■□□□□ 0.05
PRKN-205ENST00000366897 BCAMP50895 628 aa15.34■□□□□ 0.05
PRKN-205ENST00000366897 COPB1P53618 953 aaKnown RBP15.34■□□□□ 0.05
PRKN-205ENST00000366897 MAP3K12Q12852 859 aa15.34■□□□□ 0.05
PRKN-205ENST00000366897 PTGDRQ13258 359 aa15.34■□□□□ 0.05
PRKN-205ENST00000366897 MMS19Q96T76 1030 aa15.34■□□□□ 0.05
PRKN-205ENST00000366897 KRT23Q9C075 422 aa15.34■□□□□ 0.05
PRKN-205ENST00000366897 FBXO3Q9UK99 471 aa15.34■□□□□ 0.05
PRKN-205ENST00000366897 LAMB4A4D0S4 1761 aa15.33■□□□□ 0.04
PRKN-205ENST00000366897 VEGFAP15692 232 aaPredicted RBP15.33■□□□□ 0.04
PRKN-205ENST00000366897 UBXN1Q04323 297 aa15.33■□□□□ 0.04
PRKN-205ENST00000366897 PKN1Q16512 942 aa15.33■□□□□ 0.04
PRKN-205ENST00000366897 LRRC31Q6UY01 552 aa15.33■□□□□ 0.04
PRKN-205ENST00000366897 FAM196AQ6ZSG2 479 aa15.33■□□□□ 0.04
PRKN-205ENST00000366897 SH3RF1Q7Z6J0 888 aa15.33■□□□□ 0.04
PRKN-205ENST00000366897 DEFB132Q7Z7B7 95 aa15.33■□□□□ 0.04
PRKN-205ENST00000366897 PKD1L3Q7Z443 1732 aa15.33■□□□□ 0.04
PRKN-205ENST00000366897 TNKSO95271 1327 aa15.33■□□□□ 0.04
PRKN-205ENST00000366897 PCDH11XQ9BZA7 1347 aa15.33■□□□□ 0.04
PRKN-205ENST00000366897 PCDH11YQ9BZA8 1340 aa15.33■□□□□ 0.04
PRKN-205ENST00000366897 RNF40O75150 1001 aa15.33■□□□□ 0.04
PRKN-205ENST00000366897 ATP1A1P05023 1023 aaKnown RBP15.33■□□□□ 0.04
PRKN-205ENST00000366897 AMPD2Q01433 879 aa15.33■□□□□ 0.04
PRKN-205ENST00000366897 EVX2Q03828 476 aa15.33■□□□□ 0.04
PRKN-205ENST00000366897 SF3B2Q13435 895 aaKnown RBP15.33■□□□□ 0.04
PRKN-205ENST00000366897 TMTC1Q8IUR5 882 aa15.33■□□□□ 0.04
PRKN-205ENST00000366897 CTAGE1Q96RT6 745 aa15.33■□□□□ 0.04
PRKN-205ENST00000366897 CDCA7Q9BWT1 371 aaPredicted RBP15.33■□□□□ 0.04
PRKN-205ENST00000366897 CNNM2Q9H8M5 875 aa15.33■□□□□ 0.04
PRKN-205ENST00000366897 ABCC12Q96J65 1359 aa15.33■□□□□ 0.04
PRKN-205ENST00000366897 PARP4Q9UKK3 1724 aaKnown RBP15.32■□□□□ 0.04
PRKN-205ENST00000366897 POTEB2H3BUK9 544 aa15.32■□□□□ 0.04
PRKN-205ENST00000366897 CYP26C1Q6V0L0 522 aa15.32■□□□□ 0.04
PRKN-205ENST00000366897 NELFBQ8WX92 580 aa15.32■□□□□ 0.04
PRKN-205ENST00000366897 PLIN2Q99541 437 aa15.32■□□□□ 0.04
PRKN-205ENST00000366897 TTC26A0AVF1 554 aa15.32■□□□□ 0.04
PRKN-205ENST00000366897 KCNJ18B7U540 433 aa15.32■□□□□ 0.04
PRKN-205ENST00000366897 ZNF185O15231 689 aa15.32■□□□□ 0.04
PRKN-205ENST00000366897 ARID4AP29374 1257 aaPredicted RBP15.32■□□□□ 0.04
PRKN-205ENST00000366897 MCM7P33993 719 aa15.32■□□□□ 0.04
PRKN-205ENST00000366897 KCNJ12Q14500 433 aa15.32■□□□□ 0.04
PRKN-205ENST00000366897 ALX1Q15699 326 aa15.32■□□□□ 0.04
PRKN-205ENST00000366897 WHAMMP3Q1A5X7 153 aa15.32■□□□□ 0.04
PRKN-205ENST00000366897 ADGRA1Q86SQ6 560 aa15.32■□□□□ 0.04
PRKN-205ENST00000366897 DISP2A7MBM2 1401 aa15.32■□□□□ 0.04
PRKN-205ENST00000366897 MAP3K15Q6ZN16 1313 aa15.32■□□□□ 0.04
PRKN-205ENST00000366897 TRIM37O94972 964 aa15.31■□□□□ 0.04
PRKN-205ENST00000366897 MYBL2P10244 700 aa15.31■□□□□ 0.04
PRKN-205ENST00000366897 KRT2P35908 639 aa15.31■□□□□ 0.04
PRKN-205ENST00000366897 GSDMAQ96QA5 445 aa15.31■□□□□ 0.04
PRKN-205ENST00000366897 PLA2G12BQ9BX93 195 aa15.31■□□□□ 0.04
PRKN-205ENST00000366897 EPN1Q9Y6I3 576 aaPredicted RBP15.31■□□□□ 0.04
PRKN-205ENST00000366897 KCPQ6ZWJ8 1503 aa15.31■□□□□ 0.04
PRKN-205ENST00000366897 ERVV-2B6SEH9 535 aa15.31■□□□□ 0.04
PRKN-205ENST00000366897 FKBP15Q5T1M5 1219 aa15.31■□□□□ 0.04
PRKN-205ENST00000366897 STAG1Q8WVM7 1258 aa15.31■□□□□ 0.04
PRKN-205ENST00000366897 ABCF2Q9UG63 623 aa15.31■□□□□ 0.04
PRKN-205ENST00000366897 CCDC196A0A1B0GTZ2 297 aa15.3■□□□□ 0.04
PRKN-205ENST00000366897 WTIPA6NIX2 430 aaPredicted RBP15.3■□□□□ 0.04
PRKN-205ENST00000366897 EIF3CLB5ME19 914 aaKnown RBP15.3■□□□□ 0.04
PRKN-205ENST00000366897 EXOC5O00471 708 aa15.3■□□□□ 0.04
PRKN-205ENST00000366897 NDUFA10O95299 355 aa15.3■□□□□ 0.04
PRKN-205ENST00000366897 IL2RBP14784 551 aa15.3■□□□□ 0.04
PRKN-205ENST00000366897 PUM3Q15397 648 aaKnown RBP15.3■□□□□ 0.04
PRKN-205ENST00000366897 TCP11X2Q5H9J9 407 aa15.3■□□□□ 0.04
PRKN-205ENST00000366897 TTC38Q5R3I4 469 aa15.3■□□□□ 0.04
PRKN-205ENST00000366897 GIGYF2Q6Y7W6 1299 aaKnown RBP15.3■□□□□ 0.04
PRKN-205ENST00000366897 PIK3AP1Q6ZUJ8 805 aa15.3■□□□□ 0.04
PRKN-205ENST00000366897 FAM71BQ8TC56 605 aa15.3■□□□□ 0.04
PRKN-205ENST00000366897 EIF3CQ99613 913 aaKnown RBP15.3■□□□□ 0.04
PRKN-205ENST00000366897 LRP2BPQ9P2M1 347 aa15.3■□□□□ 0.04
PRKN-205ENST00000366897 DUSP10Q9Y6W6 482 aa15.3■□□□□ 0.04
PRKN-205ENST00000366897 UQCRFS1P1P0C7P4 283 aa15.3■□□□□ 0.04
PRKN-205ENST00000366897 PMS1P54277 932 aaKnown RBP15.3■□□□□ 0.04
PRKN-205ENST00000366897 PPARAQ07869 468 aa15.3■□□□□ 0.04
PRKN-205ENST00000366897 PAK1Q13153 545 aa15.3■□□□□ 0.04
PRKN-205ENST00000366897 TRIM28Q13263 835 aaKnown RBP15.3■□□□□ 0.04
PRKN-205ENST00000366897 SLC4A8Q2Y0W8 1093 aa15.3■□□□□ 0.04
PRKN-205ENST00000366897 MARCH10Q8NA82 808 aaPredicted RBP15.3■□□□□ 0.04
PRKN-205ENST00000366897 CCDC148Q8NFR7 591 aa15.3■□□□□ 0.04
PRKN-205ENST00000366897 IPO4Q8TEX9 1081 aaKnown RBP15.3■□□□□ 0.04
PRKN-205ENST00000366897 NACAP1Q9BZK3 213 aa15.3■□□□□ 0.04
PRKN-205ENST00000366897 TMOD3Q9NYL9 352 aa15.3■□□□□ 0.04
PRKN-205ENST00000366897 SYF2O95926 243 aaKnown RBP15.3■□□□□ 0.04
PRKN-205ENST00000366897 IL17AQ16552 155 aa15.3■□□□□ 0.04
PRKN-205ENST00000366897 CCDC122Q5T0U0 273 aa15.3■□□□□ 0.04
PRKN-205ENST00000366897 PACS2Q86VP3 889 aa15.3■□□□□ 0.04
PRKN-205ENST00000366897 ENAHQ8N8S7 591 aaPredicted RBP15.3■□□□□ 0.04
PRKN-205ENST00000366897 LPIN2Q92539 896 aa15.3■□□□□ 0.04
PRKN-205ENST00000366897 EHD4Q9H223 541 aa15.3■□□□□ 0.04
PRKN-205ENST00000366897 RCCD1A6NED2 376 aa15.29■□□□□ 0.04
PRKN-205ENST00000366897 NMT2O60551 498 aa15.29■□□□□ 0.04
PRKN-205ENST00000366897 IVLP07476 585 aa15.29■□□□□ 0.04
PRKN-205ENST00000366897 PRCPP42785 496 aa15.29■□□□□ 0.04
PRKN-205ENST00000366897 KLK7P49862 253 aa15.29■□□□□ 0.04
PRKN-205ENST00000366897 IQUBQ8NA54 791 aa15.29■□□□□ 0.04
PRKN-205ENST00000366897 PHF20Q9BVI0 1012 aa15.29■□□□□ 0.04
PRKN-205ENST00000366897 GNL3LQ9NVN8 582 aaKnown RBP15.29■□□□□ 0.04
PRKN-205ENST00000366897 PLEKHG2Q9H7P9 1386 aa15.29■□□□□ 0.04
PRKN-205ENST00000366897 HERVK_113P62684 666 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms