RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 DAPK3O43293 454 aa20.64■□□□□ 0.89
CLIP2-202ENST00000361545 TNNC1P63316 161 aa20.64■□□□□ 0.89
CLIP2-202ENST00000361545 RASA3Q14644 834 aa20.64■□□□□ 0.89
CLIP2-202ENST00000361545 ATP10DQ9P241 1426 aa20.64■□□□□ 0.89
CLIP2-202ENST00000361545 ARHGAP44Q17R89 818 aa20.64■□□□□ 0.89
CLIP2-202ENST00000361545 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.64■□□□□ 0.89
CLIP2-202ENST00000361545 TUBB4AP04350 444 aa20.63■□□□□ 0.89
CLIP2-202ENST00000361545 LONRF3Q496Y0 759 aa20.63■□□□□ 0.89
CLIP2-202ENST00000361545 CYP26C1Q6V0L0 522 aa20.63■□□□□ 0.89
CLIP2-202ENST00000361545 ZNF589Q86UQ0 364 aaPredicted RBP20.63■□□□□ 0.89
CLIP2-202ENST00000361545 OR52Z1P0C646 297 aa20.63■□□□□ 0.89
CLIP2-202ENST00000361545 PFKFB1P16118 471 aa20.63■□□□□ 0.89
CLIP2-202ENST00000361545 PDIA3P30101 505 aaKnown RBP20.63■□□□□ 0.89
CLIP2-202ENST00000361545 LCORLQ8N3X6 602 aa20.63■□□□□ 0.89
CLIP2-202ENST00000361545 RNF123Q5XPI4 1314 aa20.63■□□□□ 0.89
CLIP2-202ENST00000361545 GRAPQ13588 217 aa20.63■□□□□ 0.89
CLIP2-202ENST00000361545 GRAPLQ8TC17 118 aaPredicted RBP20.63■□□□□ 0.89
CLIP2-202ENST00000361545 USTQ9Y2C2 406 aa20.63■□□□□ 0.89
CLIP2-202ENST00000361545 SYNMO15061 1565 aa20.63■□□□□ 0.89
CLIP2-202ENST00000361545 PTPN12Q05209 780 aaKnown RBP20.63■□□□□ 0.89
CLIP2-202ENST00000361545 ADCK5Q3MIX3 580 aa20.63■□□□□ 0.89
CLIP2-202ENST00000361545 SLC9C1Q4G0N8 1177 aa20.63■□□□□ 0.89
CLIP2-202ENST00000361545 CTTNBP2NLQ9P2B4 639 aa20.63■□□□□ 0.89
CLIP2-202ENST00000361545 SSH2Q76I76 1423 aa20.62■□□□□ 0.89
CLIP2-202ENST00000361545 CYP4A11Q02928 519 aa20.62■□□□□ 0.89
CLIP2-202ENST00000361545 MIGA2Q7L4E1 593 aa20.62■□□□□ 0.89
CLIP2-202ENST00000361545 FAM207AQ9NSI2 230 aaPredicted RBP20.62■□□□□ 0.89
CLIP2-202ENST00000361545 ZHX1Q9UKY1 873 aaPredicted RBP20.62■□□□□ 0.89
CLIP2-202ENST00000361545 C21orf2O43822 256 aa20.62■□□□□ 0.89
CLIP2-202ENST00000361545 SLC16A2P36021 539 aa20.62■□□□□ 0.89
CLIP2-202ENST00000361545 IGBP1P78318 339 aa20.62■□□□□ 0.89
CLIP2-202ENST00000361545 KCTD2Q14681 263 aa20.62■□□□□ 0.89
CLIP2-202ENST00000361545 DCUN1D2Q6PH85 259 aa20.62■□□□□ 0.89
CLIP2-202ENST00000361545 NDC80O14777 642 aa20.62■□□□□ 0.89
CLIP2-202ENST00000361545 NPR1P16066 1061 aa20.62■□□□□ 0.89
CLIP2-202ENST00000361545 MTRF1LQ9UGC7 380 aaKnown RBP20.62■□□□□ 0.89
CLIP2-202ENST00000361545 SERPINB13Q9UIV8 391 aa20.62■□□□□ 0.89
CLIP2-202ENST00000361545 ADD2P35612 726 aa20.62■□□□□ 0.89
CLIP2-202ENST00000361545 DPP9Q86TI2 863 aa20.62■□□□□ 0.89
CLIP2-202ENST00000361545 SELENOSQ9BQE4 189 aa20.62■□□□□ 0.89
CLIP2-202ENST00000361545 LSG1Q9H089 658 aaKnown RBP20.62■□□□□ 0.89
CLIP2-202ENST00000361545 SWAP70Q9UH65 585 aa20.62■□□□□ 0.89
CLIP2-202ENST00000361545 MAP4K1Q92918 833 aa20.61■□□□□ 0.89
CLIP2-202ENST00000361545 TEKT3Q9BXF9 490 aa20.61■□□□□ 0.89
CLIP2-202ENST00000361545 AMNQ9BXJ7 453 aa20.61■□□□□ 0.89
CLIP2-202ENST00000361545 STAP2Q9UGK3 403 aa20.61■□□□□ 0.89
CLIP2-202ENST00000361545 SLFN12Q8IYM2 578 aa20.61■□□□□ 0.89
CLIP2-202ENST00000361545 TTLL6Q8N841 843 aa20.61■□□□□ 0.89
CLIP2-202ENST00000361545 NLRC4Q9NPP4 1024 aa20.61■□□□□ 0.89
CLIP2-202ENST00000361545 RPS6KA4O75676 772 aa20.61■□□□□ 0.89
CLIP2-202ENST00000361545 TTLL1O95922 423 aa20.61■□□□□ 0.89
CLIP2-202ENST00000361545 CYP21A2P08686 494 aa20.61■□□□□ 0.89
CLIP2-202ENST00000361545 VAV2P52735 878 aa20.61■□□□□ 0.89
CLIP2-202ENST00000361545 SUPT20HL1Q3ZLR7 823 aa20.61■□□□□ 0.89
CLIP2-202ENST00000361545 ADALQ6DHV7 355 aa20.61■□□□□ 0.89
CLIP2-202ENST00000361545 RASEFQ8IZ41 740 aa20.61■□□□□ 0.89
CLIP2-202ENST00000361545 ZNF853P0CG23 659 aa20.61■□□□□ 0.89
CLIP2-202ENST00000361545 NUP58Q9BVL2 599 aa20.61■□□□□ 0.89
CLIP2-202ENST00000361545 SERPINA10Q9UK55 444 aa20.61■□□□□ 0.89
CLIP2-202ENST00000361545 PCP11498 1178 aaKnown RBP20.6■□□□□ 0.89
CLIP2-202ENST00000361545 MCTP2Q6DN12 878 aa20.6■□□□□ 0.89
CLIP2-202ENST00000361545 TTLL11Q8NHH1 800 aa20.6■□□□□ 0.89
CLIP2-202ENST00000361545 PUS7LQ9H0K6 701 aaKnown RBP20.6■□□□□ 0.89
CLIP2-202ENST00000361545 BCRP11274 1271 aa20.6■□□□□ 0.89
CLIP2-202ENST00000361545 ATP2A2P16615 1042 aaKnown RBP20.6■□□□□ 0.89
CLIP2-202ENST00000361545 KLHL30Q0D2K2 578 aa20.6■□□□□ 0.89
CLIP2-202ENST00000361545 SCRN1Q12765 414 aa20.6■□□□□ 0.89
CLIP2-202ENST00000361545 JAKMIP2Q96AA8 810 aa20.6■□□□□ 0.89
CLIP2-202ENST00000361545 RTEL1Q9NZ71 1219 aa20.6■□□□□ 0.89
CLIP2-202ENST00000361545 E7EVH7 732 aa20.6■□□□□ 0.89
CLIP2-202ENST00000361545 BRD1O95696 1058 aa20.6■□□□□ 0.89
CLIP2-202ENST00000361545 USP17L8P0C7I0 530 aa20.6■□□□□ 0.89
CLIP2-202ENST00000361545 HACE1Q8IYU2 909 aa20.6■□□□□ 0.89
CLIP2-202ENST00000361545 MKRN3Q13064 507 aaKnown RBP20.6■□□□□ 0.89
CLIP2-202ENST00000361545 ZBTB8OSQ8IWT0 167 aa20.6■□□□□ 0.89
CLIP2-202ENST00000361545 DYNC1I1O14576 645 aa20.6■□□□□ 0.89
CLIP2-202ENST00000361545 LIG4P49917 911 aa20.6■□□□□ 0.89
CLIP2-202ENST00000361545 CLIC6Q96NY7 704 aa20.6■□□□□ 0.89
CLIP2-202ENST00000361545 ATG3Q9NT62 314 aa20.6■□□□□ 0.89
CLIP2-202ENST00000361545 DYNLL2Q96FJ2 89 aa20.59■□□□□ 0.89
CLIP2-202ENST00000361545 CYP2D7A0A087X1C5 515 aa20.59■□□□□ 0.89
CLIP2-202ENST00000361545 K7ENM7 598 aa20.59■□□□□ 0.89
CLIP2-202ENST00000361545 ANO3Q9BYT9 981 aa20.59■□□□□ 0.89
CLIP2-202ENST00000361545 FAM204AQ9H8W3 233 aa20.59■□□□□ 0.89
CLIP2-202ENST00000361545 OPA1O60313 960 aa20.59■□□□□ 0.89
CLIP2-202ENST00000361545 GPATCH4Q5T3I0 446 aaKnown RBP20.59■□□□□ 0.89
CLIP2-202ENST00000361545 MYOCDQ8IZQ8 938 aa20.59■□□□□ 0.89
CLIP2-202ENST00000361545 KCNG1Q9UIX4 513 aa20.59■□□□□ 0.89
CLIP2-202ENST00000361545 SNX16P57768 344 aa20.59■□□□□ 0.89
CLIP2-202ENST00000361545 RASGRP4Q8TDF6 673 aa20.59■□□□□ 0.89
CLIP2-202ENST00000361545 ATRIPQ8WXE1 791 aa20.59■□□□□ 0.89
CLIP2-202ENST00000361545 TRERF1Q96PN7 1200 aa20.59■□□□□ 0.89
CLIP2-202ENST00000361545 USP17L3A6NCW0 530 aa20.58■□□□□ 0.89
CLIP2-202ENST00000361545 USP17L4A6NCW7 530 aa20.58■□□□□ 0.89
CLIP2-202ENST00000361545 PTGDRQ13258 359 aa20.58■□□□□ 0.89
CLIP2-202ENST00000361545 CIAPIN1Q6FI81 312 aa20.58■□□□□ 0.89
CLIP2-202ENST00000361545 PPP1R21Q6ZMI0 780 aa20.58■□□□□ 0.89
CLIP2-202ENST00000361545 USP17L1Q7RTZ2 530 aa20.58■□□□□ 0.89
CLIP2-202ENST00000361545 CDK12Q9NYV4 1490 aaPredicted RBP20.58■□□□□ 0.89
CLIP2-202ENST00000361545 ERCC5P28715 1186 aaPredicted RBP20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms