RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 FAM178BQ8IXR5 827 aa7.42□□□□□ -1.22
CDC42SE2-201ENST00000360515 FGD4Q96M96 766 aa7.42□□□□□ -1.22
CDC42SE2-201ENST00000360515 HMG20BQ9P0W2 317 aa7.42□□□□□ -1.22
CDC42SE2-201ENST00000360515 PARNO95453 639 aaKnown RBP7.41□□□□□ -1.22
CDC42SE2-201ENST00000360515 TINF2Q9BSI4 451 aa7.41□□□□□ -1.22
CDC42SE2-201ENST00000360515 TCF20Q9UGU0 1960 aaKnown RBP7.41□□□□□ -1.22
CDC42SE2-201ENST00000360515 RARBP10826 455 aa7.41□□□□□ -1.22
CDC42SE2-201ENST00000360515 HERC4Q5GLZ8 1057 aaPredicted RBP7.41□□□□□ -1.22
CDC42SE2-201ENST00000360515 NOC4LQ9BVI4 516 aaKnown RBP7.41□□□□□ -1.22
CDC42SE2-201ENST00000360515 XPNPEP3Q9NQH7 507 aa7.41□□□□□ -1.22
CDC42SE2-201ENST00000360515 BDP1A6H8Y1 2624 aa7.41□□□□□ -1.22
CDC42SE2-201ENST00000360515 KIAA1217Q5T5P2 1943 aa7.41□□□□□ -1.22
CDC42SE2-201ENST00000360515 LAMA3Q16787 3333 aa7.41□□□□□ -1.22
CDC42SE2-201ENST00000360515 PLIN4Q96Q06 1357 aa7.41□□□□□ -1.22
CDC42SE2-201ENST00000360515 PLA2G6O60733 806 aa7.41□□□□□ -1.22
CDC42SE2-201ENST00000360515 WDR46O15213 610 aaKnown RBP7.4□□□□□ -1.22
CDC42SE2-201ENST00000360515 RAG1P15918 1043 aa7.4□□□□□ -1.22
CDC42SE2-201ENST00000360515 SHMT1P34896 483 aa7.4□□□□□ -1.22
CDC42SE2-201ENST00000360515 RPUSD2Q8IZ73 545 aaKnown RBP7.4□□□□□ -1.22
CDC42SE2-201ENST00000360515 ARHGAP45Q92619 1136 aa7.4□□□□□ -1.22
CDC42SE2-201ENST00000360515 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.4□□□□□ -1.22
CDC42SE2-201ENST00000360515 TMX2Q9Y320 296 aa7.4□□□□□ -1.22
CDC42SE2-201ENST00000360515 PITPNM1O00562 1244 aa7.4□□□□□ -1.22
CDC42SE2-201ENST00000360515 TLR3O15455 904 aaKnown RBP7.4□□□□□ -1.22
CDC42SE2-201ENST00000360515 DZIP1Q86YF9 867 aaKnown RBP7.4□□□□□ -1.22
CDC42SE2-201ENST00000360515 SPATA5Q8NB90 893 aa7.4□□□□□ -1.22
CDC42SE2-201ENST00000360515 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.4□□□□□ -1.22
CDC42SE2-201ENST00000360515 TMEM39AQ9NV64 488 aa7.4□□□□□ -1.22
CDC42SE2-201ENST00000360515 GNEQ9Y223 722 aaKnown RBP7.4□□□□□ -1.22
CDC42SE2-201ENST00000360515 F6X3S4 739 aa7.4□□□□□ -1.23
CDC42SE2-201ENST00000360515 BAG3O95817 575 aa7.4□□□□□ -1.23
CDC42SE2-201ENST00000360515 CXCL10P02778 98 aa7.4□□□□□ -1.23
CDC42SE2-201ENST00000360515 PBX2P40425 430 aa7.4□□□□□ -1.23
CDC42SE2-201ENST00000360515 CBX2Q14781 532 aaPredicted RBP7.4□□□□□ -1.23
CDC42SE2-201ENST00000360515 SIAH1Q8IUQ4 282 aa7.4□□□□□ -1.23
CDC42SE2-201ENST00000360515 SAMD11Q96NU1 681 aa7.4□□□□□ -1.23
CDC42SE2-201ENST00000360515 PRDM12Q9H4Q4 367 aa7.4□□□□□ -1.23
CDC42SE2-201ENST00000360515 CEP126Q9P2H0 1117 aa7.4□□□□□ -1.23
CDC42SE2-201ENST00000360515 ELL2O00472 640 aaPredicted RBP7.39□□□□□ -1.23
CDC42SE2-201ENST00000360515 SNAI1O95863 264 aaPredicted RBP7.39□□□□□ -1.23
CDC42SE2-201ENST00000360515 FDX1P10109 184 aa7.39□□□□□ -1.23
CDC42SE2-201ENST00000360515 CYP2C19P33261 490 aa7.39□□□□□ -1.23
CDC42SE2-201ENST00000360515 ERVK-21P61565 698 aa7.39□□□□□ -1.23
CDC42SE2-201ENST00000360515 FAM47AQ5JRC9 791 aa7.39□□□□□ -1.23
CDC42SE2-201ENST00000360515 HLA-CQ95604 372 aa7.39□□□□□ -1.23
CDC42SE2-201ENST00000360515 FAM161BQ96MY7 647 aa7.39□□□□□ -1.23
CDC42SE2-201ENST00000360515 SIL1Q9H173 461 aa7.39□□□□□ -1.23
CDC42SE2-201ENST00000360515 SWAP70Q9UH65 585 aa7.39□□□□□ -1.23
CDC42SE2-201ENST00000360515 FAM184BQ9ULE4 1060 aa7.39□□□□□ -1.23
CDC42SE2-201ENST00000360515 GRXCR2A6NFK2 248 aa7.39□□□□□ -1.23
CDC42SE2-201ENST00000360515 SH3RF3Q8TEJ3 882 aaPredicted RBP7.39□□□□□ -1.23
CDC42SE2-201ENST00000360515 KHSRPQ92945 711 aaKnown RBP eCLIP7.39□□□□□ -1.236e-7■■□□□ 11.6
CDC42SE2-201ENST00000360515 WNT8AQ9H1J5 351 aa7.39□□□□□ -1.23
CDC42SE2-201ENST00000360515 NKX2-4Q9H2Z4 354 aa7.39□□□□□ -1.23
CDC42SE2-201ENST00000360515 ZNF214Q9UL59 606 aaPredicted RBP7.39□□□□□ -1.23
CDC42SE2-201ENST00000360515 FANCMQ8IYD8 2048 aa7.39□□□□□ -1.23
CDC42SE2-201ENST00000360515 PLIN1O60240 522 aa7.39□□□□□ -1.23
CDC42SE2-201ENST00000360515 FGBP02675 491 aa7.39□□□□□ -1.23
CDC42SE2-201ENST00000360515 PTPN5P54829 565 aa7.39□□□□□ -1.23
CDC42SE2-201ENST00000360515 EXOSC9Q06265 439 aaKnown RBP7.39□□□□□ -1.23
CDC42SE2-201ENST00000360515 NCK2O43639 380 aa7.38□□□□□ -1.23
CDC42SE2-201ENST00000360515 ZNF365Q70YC5 407 aa7.38□□□□□ -1.23
CDC42SE2-201ENST00000360515 XAGE2Q96GT9 111 aa7.38□□□□□ -1.23
CDC42SE2-201ENST00000360515 IVNS1ABPQ9Y6Y0 642 aa7.38□□□□□ -1.23
CDC42SE2-201ENST00000360515 MCM3APO60318 1980 aa7.38□□□□□ -1.23
CDC42SE2-201ENST00000360515 FRAT2O75474 233 aaPredicted RBP7.38□□□□□ -1.23
CDC42SE2-201ENST00000360515 TAP1Q03518 808 aa7.38□□□□□ -1.23
CDC42SE2-201ENST00000360515 NEUROD2Q15784 382 aa7.38□□□□□ -1.23
CDC42SE2-201ENST00000360515 LRRFIP1Q32MZ4 808 aaKnown RBP7.38□□□□□ -1.23
CDC42SE2-201ENST00000360515 ALYREFQ86V81 257 aaKnown RBP7.38□□□□□ -1.23
CDC42SE2-201ENST00000360515 TEX11Q8IYF3 940 aa7.38□□□□□ -1.23
CDC42SE2-201ENST00000360515 GRIN2DO15399 1336 aa7.38□□□□□ -1.23
CDC42SE2-201ENST00000360515 FCER1AP12319 257 aa7.38□□□□□ -1.23
CDC42SE2-201ENST00000360515 ERCC3P19447 782 aa7.38□□□□□ -1.23
CDC42SE2-201ENST00000360515 POLA2Q14181 598 aa7.38□□□□□ -1.23
CDC42SE2-201ENST00000360515 BORCS6Q96GS4 357 aa7.38□□□□□ -1.23
CDC42SE2-201ENST00000360515 RPAP3Q9H6T3 665 aaPredicted RBP7.38□□□□□ -1.23
CDC42SE2-201ENST00000360515 IQSEC3Q9UPP2 1182 aaPredicted RBP7.38□□□□□ -1.23
CDC42SE2-201ENST00000360515 ADORA1P30542 326 aa7.37□□□□□ -1.23
CDC42SE2-201ENST00000360515 CCDC84Q86UT8 332 aaPredicted RBP7.37□□□□□ -1.23
CDC42SE2-201ENST00000360515 CCER1Q8TC90 406 aaPredicted RBP7.37□□□□□ -1.23
CDC42SE2-201ENST00000360515 FBXL18Q96ME1 805 aa7.37□□□□□ -1.23
CDC42SE2-201ENST00000360515 EFCAB14O75071 495 aa7.37□□□□□ -1.23
CDC42SE2-201ENST00000360515 HLA-DOAP06340 250 aa7.37□□□□□ -1.23
CDC42SE2-201ENST00000360515 TKFCQ3LXA3 575 aa7.37□□□□□ -1.23
CDC42SE2-201ENST00000360515 TMEM179Q6ZVK1 233 aa7.37□□□□□ -1.23
CDC42SE2-201ENST00000360515 RIOK1Q9BRS2 568 aaKnown RBP7.37□□□□□ -1.23
CDC42SE2-201ENST00000360515 SH2D4AQ9H788 454 aa7.37□□□□□ -1.23
CDC42SE2-201ENST00000360515 STARD7Q9NQZ5 370 aa7.37□□□□□ -1.23
CDC42SE2-201ENST00000360515 NOP58Q9Y2X3 529 aaKnown RBP7.37□□□□□ -1.23
CDC42SE2-201ENST00000360515 ASTN1O14525 1302 aa7.36□□□□□ -1.23
CDC42SE2-201ENST00000360515 MCAMP43121 646 aa7.36□□□□□ -1.23
CDC42SE2-201ENST00000360515 NOVP48745 357 aa7.36□□□□□ -1.23
CDC42SE2-201ENST00000360515 KCNQ1P51787 676 aa7.36□□□□□ -1.23
CDC42SE2-201ENST00000360515 HTRA4P83105 476 aaPredicted RBP7.36□□□□□ -1.23
CDC42SE2-201ENST00000360515 KCNA10Q16322 511 aa7.36□□□□□ -1.23
CDC42SE2-201ENST00000360515 CTC1Q2NKJ3 1217 aa7.36□□□□□ -1.23
CDC42SE2-201ENST00000360515 PIAS4Q8N2W9 510 aaPredicted RBP7.36□□□□□ -1.23
CDC42SE2-201ENST00000360515 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.36□□□□□ -1.23
CDC42SE2-201ENST00000360515 ABHD16BQ9H3Z7 469 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms