RNA–Protein interactions for RNA: ENST00000359680.9

TRAPPC2-201, Transcript of trafficking protein particle complex 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-201ENST00000359680 KRT86O43790 486 aa11.17□□□□□ -0.62
TRAPPC2-201ENST00000359680 ZMYND10O75800 440 aa11.17□□□□□ -0.62
TRAPPC2-201ENST00000359680 IPO7O95373 1038 aaKnown RBP11.17□□□□□ -0.62
TRAPPC2-201ENST00000359680 GOLGA6DP0CG33 693 aa11.17□□□□□ -0.62
TRAPPC2-201ENST00000359680 RCAN1P53805 252 aa11.17□□□□□ -0.62
TRAPPC2-201ENST00000359680 KRT83P78385 493 aa11.17□□□□□ -0.62
TRAPPC2-201ENST00000359680 PAPD7Q5XG87 772 aaKnown RBP11.17□□□□□ -0.62
TRAPPC2-201ENST00000359680 IQCEQ6IPM2 695 aa11.17□□□□□ -0.62
TRAPPC2-201ENST00000359680 ZBTB38Q8NAP3 1195 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC2-201ENST00000359680 STAG1Q8WVM7 1258 aa11.17□□□□□ -0.62
TRAPPC2-201ENST00000359680 JAKMIP2Q96AA8 810 aa11.17□□□□□ -0.62
TRAPPC2-201ENST00000359680 SELENOOQ9BVL4 669 aa11.17□□□□□ -0.62
TRAPPC2-201ENST00000359680 GOLGA6AQ9NYA3 693 aa11.17□□□□□ -0.62
TRAPPC2-201ENST00000359680 XDHP47989 1333 aa11.17□□□□□ -0.62
TRAPPC2-201ENST00000359680 TTC26A0AVF1 554 aa11.16□□□□□ -0.62
TRAPPC2-201ENST00000359680 GOLGA6BA6NDN3 693 aa11.16□□□□□ -0.62
TRAPPC2-201ENST00000359680 ZNF174Q15697 407 aa11.16□□□□□ -0.62
TRAPPC2-201ENST00000359680 TTLL11Q8NHH1 800 aa11.16□□□□□ -0.62
TRAPPC2-201ENST00000359680 PYM1Q9BRP8 204 aaKnown RBP11.16□□□□□ -0.62
TRAPPC2-201ENST00000359680 RMND1Q9NWS8 449 aa11.16□□□□□ -0.62
TRAPPC2-201ENST00000359680 TACC3Q9Y6A5 838 aa11.16□□□□□ -0.62
TRAPPC2-201ENST00000359680 BCL9LQ86UU0 1499 aa11.16□□□□□ -0.62
TRAPPC2-201ENST00000359680 MYH13Q9UKX3 1938 aa11.16□□□□□ -0.62
TRAPPC2-201ENST00000359680 EBAG9O00559 213 aa11.16□□□□□ -0.62
TRAPPC2-201ENST00000359680 SHOX2O60902 331 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC2-201ENST00000359680 ARID4AP29374 1257 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC2-201ENST00000359680 KIF6Q6ZMV9 814 aa11.16□□□□□ -0.62
TRAPPC2-201ENST00000359680 GSPT2Q8IYD1 628 aaKnown RBP11.16□□□□□ -0.62
TRAPPC2-201ENST00000359680 RNF41Q9H4P4 317 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC2-201ENST00000359680 GREM2Q9H772 168 aa11.16□□□□□ -0.62
TRAPPC2-201ENST00000359680 GNL3LQ9NVN8 582 aaKnown RBP11.16□□□□□ -0.62
TRAPPC2-201ENST00000359680 ATF5Q9Y2D1 282 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC2-201ENST00000359680 ZC3H4Q9UPT8 1303 aaKnown RBP11.16□□□□□ -0.62
TRAPPC2-201ENST00000359680 TIAM2Q8IVF5 1701 aa11.16□□□□□ -0.62
TRAPPC2-201ENST00000359680 RTL9Q8NET4 1388 aa11.15□□□□□ -0.62
TRAPPC2-201ENST00000359680 GSG1L2A8MUP6 293 aa11.15□□□□□ -0.62
TRAPPC2-201ENST00000359680 GTPBP6O43824 516 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC2-201ENST00000359680 ERLIN2O94905 339 aa11.15□□□□□ -0.62
TRAPPC2-201ENST00000359680 CCT5P48643 541 aa11.15□□□□□ -0.62
TRAPPC2-201ENST00000359680 TRIM28Q13263 835 aaKnown RBP11.15□□□□□ -0.62
TRAPPC2-201ENST00000359680 CHRNA2Q15822 529 aa11.15□□□□□ -0.62
TRAPPC2-201ENST00000359680 EARS2Q5JPH6 523 aaKnown RBP11.15□□□□□ -0.62
TRAPPC2-201ENST00000359680 TTC38Q5R3I4 469 aa11.15□□□□□ -0.62
TRAPPC2-201ENST00000359680 ZNF658Q5TYW1 1059 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC2-201ENST00000359680 MMS22LQ6ZRQ5 1243 aa11.15□□□□□ -0.62
TRAPPC2-201ENST00000359680 MTA3Q9BTC8 594 aa11.15□□□□□ -0.62
TRAPPC2-201ENST00000359680 KAT14Q9H8E8 782 aa11.15□□□□□ -0.62
TRAPPC2-201ENST00000359680 MYH2Q9UKX2 1941 aa11.15□□□□□ -0.62
TRAPPC2-201ENST00000359680 SHTN1A0MZ66 631 aa11.15□□□□□ -0.62
TRAPPC2-201ENST00000359680 H7C1D1 291 aa11.15□□□□□ -0.62
TRAPPC2-201ENST00000359680 PDE8BO95263 885 aa11.15□□□□□ -0.62
TRAPPC2-201ENST00000359680 CYLC1P35663 651 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC2-201ENST00000359680 HERVK_113P62684 666 aa11.15□□□□□ -0.62
TRAPPC2-201ENST00000359680 PTGDRQ13258 359 aa11.15□□□□□ -0.62
TRAPPC2-201ENST00000359680 PPP2R5BQ15173 497 aa11.15□□□□□ -0.62
TRAPPC2-201ENST00000359680 CCNI2Q6ZMN8 369 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC2-201ENST00000359680 DNAJC7Q99615 494 aa11.15□□□□□ -0.62
TRAPPC2-201ENST00000359680 PHF20Q9BVI0 1012 aa11.15□□□□□ -0.62
TRAPPC2-201ENST00000359680 GEMIN8Q9NWZ8 242 aaKnown RBP11.15□□□□□ -0.62
TRAPPC2-201ENST00000359680 MAPK8IP1Q9UQF2 711 aa11.15□□□□□ -0.62
TRAPPC2-201ENST00000359680 SLC4A4Q9Y6R1 1079 aa11.15□□□□□ -0.62
TRAPPC2-201ENST00000359680 PRDM1O75626 825 aa11.15□□□□□ -0.63
TRAPPC2-201ENST00000359680 PARP1P09874 1014 aaKnown RBP11.15□□□□□ -0.63
TRAPPC2-201ENST00000359680 IDEP14735 1019 aa11.15□□□□□ -0.63
TRAPPC2-201ENST00000359680 GNAT2P19087 354 aa11.15□□□□□ -0.63
TRAPPC2-201ENST00000359680 PPFIA1Q13136 1202 aa11.15□□□□□ -0.63
TRAPPC2-201ENST00000359680 SUGP1Q8IWZ8 645 aaKnown RBP11.15□□□□□ -0.63
TRAPPC2-201ENST00000359680 MB21D1Q8N884 522 aa11.15□□□□□ -0.63
TRAPPC2-201ENST00000359680 JADE2Q9NQC1 790 aa11.15□□□□□ -0.63
TRAPPC2-201ENST00000359680 ZNHIT6Q9NWK9 470 aaKnown RBP11.15□□□□□ -0.63
TRAPPC2-201ENST00000359680 FAM184BQ9ULE4 1060 aa11.15□□□□□ -0.63
TRAPPC2-201ENST00000359680 TFR2Q9UP52 801 aa11.15□□□□□ -0.63
TRAPPC2-201ENST00000359680 UBR2Q8IWV8 1755 aa11.14□□□□□ -0.63
TRAPPC2-201ENST00000359680 ANO9A1A5B4 782 aa11.14□□□□□ -0.63
TRAPPC2-201ENST00000359680 LGALS16A8MUM7 142 aa11.14□□□□□ -0.63
TRAPPC2-201ENST00000359680 ERVV-2B6SEH9 535 aa11.14□□□□□ -0.63
TRAPPC2-201ENST00000359680 PRKAB2O43741 272 aa11.14□□□□□ -0.63
TRAPPC2-201ENST00000359680 MYBL2P10244 700 aa11.14□□□□□ -0.63
TRAPPC2-201ENST00000359680 IRAK1P51617 712 aa11.14□□□□□ -0.63
TRAPPC2-201ENST00000359680 VGLL2Q8N8G2 317 aa11.14□□□□□ -0.63
TRAPPC2-201ENST00000359680 SPATA5Q8NB90 893 aa11.14□□□□□ -0.63
TRAPPC2-201ENST00000359680 CAPS2Q9BXY5 557 aa11.14□□□□□ -0.63
TRAPPC2-201ENST00000359680 CAPN11Q9UMQ6 739 aa11.14□□□□□ -0.63
TRAPPC2-201ENST00000359680 A0A1W2PQC6 194 aa11.14□□□□□ -0.63
TRAPPC2-201ENST00000359680 hCG_1642624A0A1W2PR95 340 aa11.14□□□□□ -0.63
TRAPPC2-201ENST00000359680 AGPSO00116 658 aa11.14□□□□□ -0.63
TRAPPC2-201ENST00000359680 EXOC5O00471 708 aa11.14□□□□□ -0.63
TRAPPC2-201ENST00000359680 RPN1P04843 607 aaKnown RBP11.14□□□□□ -0.63
TRAPPC2-201ENST00000359680 LIG3P49916 1009 aa11.14□□□□□ -0.63
TRAPPC2-201ENST00000359680 ATP2C1P98194 919 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC2-201ENST00000359680 E2F4Q16254 413 aa11.14□□□□□ -0.63
TRAPPC2-201ENST00000359680 PDXDC2PQ6P474 469 aa11.14□□□□□ -0.63
TRAPPC2-201ENST00000359680 GBP6Q6ZN66 633 aa11.14□□□□□ -0.63
TRAPPC2-201ENST00000359680 SYNE4Q8N205 404 aa11.14□□□□□ -0.63
TRAPPC2-201ENST00000359680 BCAS4Q8TDM0 211 aa11.14□□□□□ -0.63
TRAPPC2-201ENST00000359680 MAGEC2Q9UBF1 373 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC2-201ENST00000359680 FAM169AQ9Y6X4 670 aa11.14□□□□□ -0.63
TRAPPC2-201ENST00000359680 TNKSO95271 1327 aa11.13□□□□□ -0.63
TRAPPC2-201ENST00000359680 PCDH11XQ9BZA7 1347 aa11.13□□□□□ -0.63
TRAPPC2-201ENST00000359680 PCDH11YQ9BZA8 1340 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms