RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 HSPA1BP0DMV9 641 aaKnown RBP4.73□□□□□ -1.65
CNOT4-202ENST00000356162 CHMLP26374 656 aa4.73□□□□□ -1.65
CNOT4-202ENST00000356162 PLCD1P51178 756 aa4.73□□□□□ -1.65
CNOT4-202ENST00000356162 INHBEP58166 350 aa4.73□□□□□ -1.65
CNOT4-202ENST00000356162 SNAPC2Q13487 334 aa4.73□□□□□ -1.65
CNOT4-202ENST00000356162 SLC4A8Q2Y0W8 1093 aa4.73□□□□□ -1.65
CNOT4-202ENST00000356162 ZNF589Q86UQ0 364 aaPredicted RBP4.73□□□□□ -1.65
CNOT4-202ENST00000356162 IFNL3Q8IZI9 196 aa4.73□□□□□ -1.65
CNOT4-202ENST00000356162 EMID1Q96A84 441 aaPredicted RBP4.73□□□□□ -1.65
CNOT4-202ENST00000356162 CCDC17Q96LX7 622 aa4.73□□□□□ -1.65
CNOT4-202ENST00000356162 SLC6A16Q9GZN6 736 aa4.73□□□□□ -1.65
CNOT4-202ENST00000356162 GPCPD1Q9NPB8 672 aa4.73□□□□□ -1.65
CNOT4-202ENST00000356162 SLC27A5Q9Y2P5 690 aa4.73□□□□□ -1.65
CNOT4-202ENST00000356162 A0A0G2JMZ2 1700 aa4.72□□□□□ -1.65
CNOT4-202ENST00000356162 CYP2D7A0A087X1C5 515 aa4.72□□□□□ -1.65
CNOT4-202ENST00000356162 A0A0G2JLL6 359 aaPredicted RBP4.72□□□□□ -1.65
CNOT4-202ENST00000356162 USP17L5A8MUK1 530 aa4.72□□□□□ -1.65
CNOT4-202ENST00000356162 ALDH1A1P00352 501 aa4.72□□□□□ -1.65
CNOT4-202ENST00000356162 APPP05067 770 aa4.72□□□□□ -1.65
CNOT4-202ENST00000356162 SLC3A2P08195 630 aaKnown RBP4.72□□□□□ -1.65
CNOT4-202ENST00000356162 SLURP2P0DP57 97 aa4.72□□□□□ -1.65
CNOT4-202ENST00000356162 CETPP11597 493 aa4.72□□□□□ -1.65
CNOT4-202ENST00000356162 CLCN1P35523 988 aa4.72□□□□□ -1.65
CNOT4-202ENST00000356162 TM4SF4P48230 202 aa4.72□□□□□ -1.65
CNOT4-202ENST00000356162 NT5C2P49902 561 aa4.72□□□□□ -1.65
CNOT4-202ENST00000356162 RRP1BQ14684 758 aaKnown RBP4.72□□□□□ -1.65
CNOT4-202ENST00000356162 CERKLQ49MI3 558 aaPredicted RBP4.72□□□□□ -1.65
CNOT4-202ENST00000356162 TMEM179Q6ZVK1 233 aa4.72□□□□□ -1.65
CNOT4-202ENST00000356162 PRRT2Q7Z6L0 340 aaPredicted RBP4.72□□□□□ -1.65
CNOT4-202ENST00000356162 ZIC5Q96T25 663 aa4.72□□□□□ -1.65
CNOT4-202ENST00000356162 BEGAINQ9BUH8 593 aa4.72□□□□□ -1.65
CNOT4-202ENST00000356162 WDR18Q9BV38 432 aa4.72□□□□□ -1.65
CNOT4-202ENST00000356162 DSCC1Q9BVC3 393 aa4.72□□□□□ -1.65
CNOT4-202ENST00000356162 CFHR5Q9BXR6 569 aa4.72□□□□□ -1.65
CNOT4-202ENST00000356162 ZNF287Q9HBT7 754 aa4.72□□□□□ -1.65
CNOT4-202ENST00000356162 ANAPC4Q9UJX5 808 aa4.72□□□□□ -1.65
CNOT4-202ENST00000356162 MYH4Q9Y623 1939 aa4.72□□□□□ -1.65
CNOT4-202ENST00000356162 CCL15-CCL14A0A0B4J2E2 113 aa4.72□□□□□ -1.65
CNOT4-202ENST00000356162 CDC45O75419 566 aa4.72□□□□□ -1.65
CNOT4-202ENST00000356162 GDF11O95390 407 aa4.72□□□□□ -1.65
CNOT4-202ENST00000356162 HSPD1P10809 573 aaKnown RBP4.72□□□□□ -1.65
CNOT4-202ENST00000356162 CDK8P49336 464 aa4.72□□□□□ -1.65
CNOT4-202ENST00000356162 PPARAQ07869 468 aa4.72□□□□□ -1.65
CNOT4-202ENST00000356162 CCL15Q16663 113 aa4.72□□□□□ -1.65
CNOT4-202ENST00000356162 ABCB5Q2M3G0 1257 aa4.72□□□□□ -1.65
CNOT4-202ENST00000356162 OTUD7BQ6GQQ9 843 aa4.72□□□□□ -1.65
CNOT4-202ENST00000356162 CWC27Q6UX04 472 aaKnown RBP4.72□□□□□ -1.65
CNOT4-202ENST00000356162 SLC44A5Q8NCS7 719 aa4.72□□□□□ -1.65
CNOT4-202ENST00000356162 BRI3BPQ8WY22 251 aa4.72□□□□□ -1.65
CNOT4-202ENST00000356162 DYNLL2Q96FJ2 89 aa4.72□□□□□ -1.65
CNOT4-202ENST00000356162 CABP5Q9NP86 173 aa4.72□□□□□ -1.65
CNOT4-202ENST00000356162 SLC45A1Q9Y2W3 748 aa4.72□□□□□ -1.65
CNOT4-202ENST00000356162 AFG3L2Q9Y4W6 797 aa4.72□□□□□ -1.65
CNOT4-202ENST00000356162 SGSM2O43147 1006 aa4.71□□□□□ -1.65
CNOT4-202ENST00000356162 GH2P01242 217 aa4.71□□□□□ -1.65
CNOT4-202ENST00000356162 HSPA8P11142 646 aaKnown RBP4.71□□□□□ -1.65
CNOT4-202ENST00000356162 PCP11498 1178 aaKnown RBP4.71□□□□□ -1.65
CNOT4-202ENST00000356162 CTCFP49711 727 aaPredicted RBP4.71□□□□□ -1.65
CNOT4-202ENST00000356162 PDE4BQ07343 736 aa4.71□□□□□ -1.65
CNOT4-202ENST00000356162 LAPTM4AQ15012 233 aa4.71□□□□□ -1.65
CNOT4-202ENST00000356162 NOM1Q5C9Z4 860 aaKnown RBP4.71□□□□□ -1.65
CNOT4-202ENST00000356162 SH3D19Q5HYK7 790 aa4.71□□□□□ -1.65
CNOT4-202ENST00000356162 VPS53Q5VIR6 699 aa4.71□□□□□ -1.65
CNOT4-202ENST00000356162 CASC1Q6TDU7 716 aa4.71□□□□□ -1.65
CNOT4-202ENST00000356162 FASTKD5Q7L8L6 764 aaKnown RBP4.71□□□□□ -1.65
CNOT4-202ENST00000356162 ANKRD23Q86SG2 305 aa4.71□□□□□ -1.65
CNOT4-202ENST00000356162 PROCA1Q8NCQ7 364 aaPredicted RBP4.71□□□□□ -1.65
CNOT4-202ENST00000356162 ZNF280CQ8ND82 737 aa4.71□□□□□ -1.65
CNOT4-202ENST00000356162 C12orf42Q96LP6 360 aa4.71□□□□□ -1.65
CNOT4-202ENST00000356162 FAM217BQ9NTX9 383 aaPredicted RBP4.71□□□□□ -1.65
CNOT4-202ENST00000356162 CTNNA3Q9UI47 895 aa4.71□□□□□ -1.65
CNOT4-202ENST00000356162 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.71□□□□□ -1.65
CNOT4-202ENST00000356162 ZHX2Q9Y6X8 837 aa4.71□□□□□ -1.65
CNOT4-202ENST00000356162 PARP14Q460N5 1801 aa4.71□□□□□ -1.66
CNOT4-202ENST00000356162 MINDY4BA8MYZ0 360 aa4.71□□□□□ -1.66
CNOT4-202ENST00000356162 C19orf81C9J6K1 198 aa4.71□□□□□ -1.66
CNOT4-202ENST00000356162 IGF2BP3O00425 579 aaKnown RBP eCLIP4.71□□□□□ -1.66
CNOT4-202ENST00000356162 ORC4O43929 436 aa4.71□□□□□ -1.66
CNOT4-202ENST00000356162 KDM4AO75164 1064 aa4.71□□□□□ -1.66
CNOT4-202ENST00000356162 FMNL1O95466 1100 aaPredicted RBP4.71□□□□□ -1.66
CNOT4-202ENST00000356162 AKR1B1P15121 316 aa4.71□□□□□ -1.66
CNOT4-202ENST00000356162 RASA1P20936 1047 aa4.71□□□□□ -1.66
CNOT4-202ENST00000356162 GUCY1A2P33402 732 aa4.71□□□□□ -1.66
CNOT4-202ENST00000356162 SLC19A1P41440 591 aa4.71□□□□□ -1.66
CNOT4-202ENST00000356162 USP14P54578 494 aa4.71□□□□□ -1.66
CNOT4-202ENST00000356162 MOGSQ13724 837 aa4.71□□□□□ -1.66
CNOT4-202ENST00000356162 USP17L2Q6R6M4 530 aa4.71□□□□□ -1.66
CNOT4-202ENST00000356162 SKAP1Q86WV1 359 aa4.71□□□□□ -1.66
CNOT4-202ENST00000356162 KRI1Q8N9T8 703 aaKnown RBP4.71□□□□□ -1.66
CNOT4-202ENST00000356162 STAG1Q8WVM7 1258 aa4.71□□□□□ -1.66
CNOT4-202ENST00000356162 ESYT1Q9BSJ8 1104 aa4.71□□□□□ -1.66
CNOT4-202ENST00000356162 RNF41Q9H4P4 317 aaPredicted RBP4.71□□□□□ -1.66
CNOT4-202ENST00000356162 SH2D4AQ9H788 454 aa4.71□□□□□ -1.66
CNOT4-202ENST00000356162 RNF186Q9NXI6 227 aa4.71□□□□□ -1.66
CNOT4-202ENST00000356162 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.71□□□□□ -1.66
CNOT4-202ENST00000356162 IGKV6D-41A0A0C4DH26 115 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 BTBD19C9JJ37 291 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 MPHOSPH10O00566 681 aaKnown RBP4.7□□□□□ -1.66
CNOT4-202ENST00000356162 FOXN1O15353 648 aa4.7□□□□□ -1.66
CNOT4-202ENST00000356162 GFRA3O60609 400 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms