RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 IFT20Q8IY31 132 aa17.19■□□□□ 0.34
SRPK1-201ENST00000346162 NSUN7Q8NE18 718 aaKnown RBP17.19■□□□□ 0.34
SRPK1-201ENST00000346162 STAMQ92783 540 aa17.19■□□□□ 0.34
SRPK1-201ENST00000346162 STK38LQ9Y2H1 464 aa17.19■□□□□ 0.34
SRPK1-201ENST00000346162 TMTC1Q8IUR5 882 aa17.19■□□□□ 0.34
SRPK1-201ENST00000346162 MRFAP1Q9Y605 127 aa17.19■□□□□ 0.34
SRPK1-201ENST00000346162 TULP4Q9NRJ4 1543 aa17.19■□□□□ 0.34
SRPK1-201ENST00000346162 A0A1W2PRG0 241 aa17.19■□□□□ 0.34
SRPK1-201ENST00000346162 CETN3O15182 167 aa17.19■□□□□ 0.34
SRPK1-201ENST00000346162 BTBD18B2RXH4 712 aa17.19■□□□□ 0.34
SRPK1-201ENST00000346162 LUC7L3O95232 432 aaKnown RBP17.19■□□□□ 0.34
SRPK1-201ENST00000346162 IGKV5-2P06315 115 aa17.19■□□□□ 0.34
SRPK1-201ENST00000346162 PPP1R2P41236 205 aa17.19■□□□□ 0.34
SRPK1-201ENST00000346162 EIF6P56537 245 aaKnown RBP17.19■□□□□ 0.34
SRPK1-201ENST00000346162 CYP26C1Q6V0L0 522 aa17.19■□□□□ 0.34
SRPK1-201ENST00000346162 CEP128Q6ZU80 1094 aa17.19■□□□□ 0.34
SRPK1-201ENST00000346162 INTS8Q75QN2 995 aaKnown RBP17.19■□□□□ 0.34
SRPK1-201ENST00000346162 SERTAD1Q9UHV2 236 aa17.19■□□□□ 0.34
SRPK1-201ENST00000346162 SERPINA10Q9UK55 444 aa17.19■□□□□ 0.34
SRPK1-201ENST00000346162 SAR1BQ9Y6B6 198 aa17.19■□□□□ 0.34
SRPK1-201ENST00000346162 LMTK2Q8IWU2 1503 aa17.18■□□□□ 0.34
SRPK1-201ENST00000346162 TRMT44Q8IYL2 757 aaKnown RBP17.18■□□□□ 0.34
SRPK1-201ENST00000346162 CTNNBL1Q8WYA6 563 aaPredicted RBP17.18■□□□□ 0.34
SRPK1-201ENST00000346162 GBP5Q96PP8 586 aa17.18■□□□□ 0.34
SRPK1-201ENST00000346162 FAM114A2Q9NRY5 505 aa17.18■□□□□ 0.34
SRPK1-201ENST00000346162 ATG3Q9NT62 314 aa17.18■□□□□ 0.34
SRPK1-201ENST00000346162 QRICH2Q9H0J4 1663 aa17.18■□□□□ 0.34
SRPK1-201ENST00000346162 DESP17661 470 aa17.18■□□□□ 0.34
SRPK1-201ENST00000346162 GKAP1Q5VSY0 366 aaPredicted RBP17.18■□□□□ 0.34
SRPK1-201ENST00000346162 MAPKAPK5Q8IW41 473 aa17.18■□□□□ 0.34
SRPK1-201ENST00000346162 SLF1Q9BQI6 1058 aa17.18■□□□□ 0.34
SRPK1-201ENST00000346162 TNKSO95271 1327 aa17.18■□□□□ 0.34
SRPK1-201ENST00000346162 KIF3CO14782 793 aa17.18■□□□□ 0.34
SRPK1-201ENST00000346162 PFDN1O60925 122 aa17.18■□□□□ 0.34
SRPK1-201ENST00000346162 SLC20A2Q08357 652 aa17.18■□□□□ 0.34
SRPK1-201ENST00000346162 PAK1Q13153 545 aa17.18■□□□□ 0.34
SRPK1-201ENST00000346162 CCDC174Q6PII3 467 aa17.18■□□□□ 0.34
SRPK1-201ENST00000346162 ZNF365Q70YC5 407 aa17.18■□□□□ 0.34
SRPK1-201ENST00000346162 PARP3Q9Y6F1 533 aa17.18■□□□□ 0.34
SRPK1-201ENST00000346162 HEG1Q9ULI3 1381 aa17.18■□□□□ 0.34
SRPK1-201ENST00000346162 LAMC1P11047 1609 aa17.18■□□□□ 0.34
SRPK1-201ENST00000346162 HOMEZQ8IX15 550 aa17.17■□□□□ 0.34
SRPK1-201ENST00000346162 RNF10Q8N5U6 811 aaKnown RBP17.17■□□□□ 0.34
SRPK1-201ENST00000346162 TBC1D5Q92609 795 aa17.17■□□□□ 0.34
SRPK1-201ENST00000346162 CCNT1O60563 726 aaKnown RBP17.17■□□□□ 0.34
SRPK1-201ENST00000346162 TXKP42681 527 aa17.17■□□□□ 0.34
SRPK1-201ENST00000346162 ZBTB16Q05516 673 aa17.17■□□□□ 0.34
SRPK1-201ENST00000346162 KCTD16Q68DU8 428 aa17.17■□□□□ 0.34
SRPK1-201ENST00000346162 FCHSD1Q86WN1 690 aa17.17■□□□□ 0.34
SRPK1-201ENST00000346162 CSGALNACT2Q8N6G5 542 aa17.17■□□□□ 0.34
SRPK1-201ENST00000346162 TCP11Q8WWU5 503 aa17.17■□□□□ 0.34
SRPK1-201ENST00000346162 NOC4LQ9BVI4 516 aaKnown RBP17.17■□□□□ 0.34
SRPK1-201ENST00000346162 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.17■□□□□ 0.34
SRPK1-201ENST00000346162 KRT13P13646 458 aa17.17■□□□□ 0.34
SRPK1-201ENST00000346162 IL6STP40189 918 aaPredicted RBP17.17■□□□□ 0.34
SRPK1-201ENST00000346162 NONOQ15233 471 aaKnown RBP eCLIP17.17■□□□□ 0.34
SRPK1-201ENST00000346162 STMN2Q93045 179 aa17.17■□□□□ 0.34
SRPK1-201ENST00000346162 LOC102724428A0A0B4J2F2 783 aa17.17■□□□□ 0.34
SRPK1-201ENST00000346162 TRAF5O00463 557 aa17.17■□□□□ 0.34
SRPK1-201ENST00000346162 SIK1P57059 783 aa17.17■□□□□ 0.34
SRPK1-201ENST00000346162 CHRNDQ07001 517 aa17.17■□□□□ 0.34
SRPK1-201ENST00000346162 HS2ST1Q7LGA3 356 aa17.17■□□□□ 0.34
SRPK1-201ENST00000346162 OSBP2Q969R2 916 aa17.17■□□□□ 0.34
SRPK1-201ENST00000346162 SH3GL3Q99963 347 aa17.17■□□□□ 0.34
SRPK1-201ENST00000346162 ABCB6Q9NP58 842 aa17.17■□□□□ 0.34
SRPK1-201ENST00000346162 CYP27B1O15528 508 aa17.16■□□□□ 0.34
SRPK1-201ENST00000346162 NDUFA8P51970 172 aa17.16■□□□□ 0.34
SRPK1-201ENST00000346162 EPHA10Q5JZY3 1008 aa17.16■□□□□ 0.34
SRPK1-201ENST00000346162 PI16Q6UXB8 463 aa17.16■□□□□ 0.34
SRPK1-201ENST00000346162 TGFBRAP1Q8WUH2 860 aa17.16■□□□□ 0.34
SRPK1-201ENST00000346162 IRX1P78414 480 aaPredicted RBP17.16■□□□□ 0.34
SRPK1-201ENST00000346162 ACTN3Q08043 901 aaPredicted RBP17.16■□□□□ 0.34
SRPK1-201ENST00000346162 PAK2Q13177 524 aa17.16■□□□□ 0.34
SRPK1-201ENST00000346162 RASIP1Q5U651 963 aa17.16■□□□□ 0.34
SRPK1-201ENST00000346162 KCNK9Q9NPC2 374 aa17.16■□□□□ 0.34
SRPK1-201ENST00000346162 AXIN2Q9Y2T1 843 aa17.16■□□□□ 0.34
SRPK1-201ENST00000346162 CLIC4Q9Y696 253 aa17.16■□□□□ 0.34
SRPK1-201ENST00000346162 KRT9P35527 623 aa17.16■□□□□ 0.34
SRPK1-201ENST00000346162 HINFPQ9BQA5 517 aa17.16■□□□□ 0.34
SRPK1-201ENST00000346162 RTEL1Q9NZ71 1219 aa17.16■□□□□ 0.34
SRPK1-201ENST00000346162 RASAL2Q9UJF2 1139 aa17.16■□□□□ 0.34
SRPK1-201ENST00000346162 USP27XA6NNY8 438 aa17.16■□□□□ 0.34
SRPK1-201ENST00000346162 VSIG1Q86XK7 387 aa17.16■□□□□ 0.34
SRPK1-201ENST00000346162 CCDC65Q8IXS2 484 aa17.16■□□□□ 0.34
SRPK1-201ENST00000346162 STAG1Q8WVM7 1258 aa17.16■□□□□ 0.34
SRPK1-201ENST00000346162 ZSCAN10Q96SZ4 725 aaPredicted RBP17.16■□□□□ 0.34
SRPK1-201ENST00000346162 PSMB7Q99436 277 aa17.16■□□□□ 0.34
SRPK1-201ENST00000346162 ARPP21Q9UBL0 812 aaPredicted RBP17.16■□□□□ 0.34
SRPK1-201ENST00000346162 APOA5Q6Q788 366 aa17.15■□□□□ 0.34
SRPK1-201ENST00000346162 KRT25Q7Z3Z0 450 aa17.15■□□□□ 0.34
SRPK1-201ENST00000346162 EPC1Q9H2F5 836 aa17.15■□□□□ 0.34
SRPK1-201ENST00000346162 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.15■□□□□ 0.34
SRPK1-201ENST00000346162 ABCA9Q8IUA7 1624 aa17.15■□□□□ 0.34
SRPK1-201ENST00000346162 M0R2C6 588 aa17.15■□□□□ 0.34
SRPK1-201ENST00000346162 FAM13AO94988 1023 aa17.15■□□□□ 0.34
SRPK1-201ENST00000346162 CNNM4Q6P4Q7 775 aa17.15■□□□□ 0.34
SRPK1-201ENST00000346162 CCDC63Q8NA47 563 aa17.15■□□□□ 0.34
SRPK1-201ENST00000346162 DDX12PQ92771 950 aa17.15■□□□□ 0.34
SRPK1-201ENST00000346162 KCNF1Q9H3M0 494 aa17.15■□□□□ 0.34
SRPK1-201ENST00000346162 A0A1W2PQ27 194 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms