RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 PLAAQ9Y263 795 aa14.96□□□□□ -0.01
TRIO-202ENST00000344204 SLC44A4Q53GD3 710 aa14.96□□□□□ -0.01
TRIO-202ENST00000344204 C8orf58Q8NAV2 365 aa14.96□□□□□ -0.01
TRIO-202ENST00000344204 TMEM232C9JQI7 657 aa14.96□□□□□ -0.02
TRIO-202ENST00000344204 SLC5A1P13866 664 aa14.96□□□□□ -0.02
TRIO-202ENST00000344204 ARID5BQ14865 1188 aa14.96□□□□□ -0.02
TRIO-202ENST00000344204 ANKRD20A4Q4UJ75 823 aa14.96□□□□□ -0.02
TRIO-202ENST00000344204 ANKRD20A8PQ5CZ79 823 aa14.96□□□□□ -0.02
TRIO-202ENST00000344204 ANKRD20A2Q5SQ80 823 aa14.96□□□□□ -0.02
TRIO-202ENST00000344204 ANKRD20A1Q5TYW2 823 aa14.96□□□□□ -0.02
TRIO-202ENST00000344204 THOC1Q96FV9 657 aaKnown RBP14.96□□□□□ -0.02
TRIO-202ENST00000344204 ECT2Q9H8V3 914 aa14.96□□□□□ -0.02
TRIO-202ENST00000344204 USP19O94966 1318 aa14.96□□□□□ -0.02
TRIO-202ENST00000344204 IFIT5Q13325 482 aaKnown RBP14.96□□□□□ -0.02
TRIO-202ENST00000344204 PTPRKQ15262 1439 aa14.95□□□□□ -0.02
TRIO-202ENST00000344204 SART1O43290 800 aaKnown RBP14.95□□□□□ -0.02
TRIO-202ENST00000344204 CUL5Q93034 780 aa14.95□□□□□ -0.02
TRIO-202ENST00000344204 ARHGAP10A1A4S6 786 aa14.95□□□□□ -0.02
TRIO-202ENST00000344204 DCAF17Q5H9S7 520 aaPredicted RBP14.95□□□□□ -0.02
TRIO-202ENST00000344204 LCA5Q86VQ0 697 aa14.95□□□□□ -0.02
TRIO-202ENST00000344204 NLRP7Q8WX94 980 aa14.95□□□□□ -0.02
TRIO-202ENST00000344204 ATP2A3Q93084 1043 aa14.95□□□□□ -0.02
TRIO-202ENST00000344204 PCDHA7Q9UN72 937 aa14.95□□□□□ -0.02
TRIO-202ENST00000344204 RIMS2Q9UQ26 1411 aa14.95□□□□□ -0.02
TRIO-202ENST00000344204 HINFPQ9BQA5 517 aa14.95□□□□□ -0.02
TRIO-202ENST00000344204 MAPK8IP1Q9UQF2 711 aa14.95□□□□□ -0.02
TRIO-202ENST00000344204 TOGARAM2Q6ZUX3 1019 aa14.95□□□□□ -0.02
TRIO-202ENST00000344204 NRBF2Q96F24 287 aa14.95□□□□□ -0.02
TRIO-202ENST00000344204 MSH2P43246 934 aa14.95□□□□□ -0.02
TRIO-202ENST00000344204 EIF3BP55884 814 aaKnown RBP14.95□□□□□ -0.02
TRIO-202ENST00000344204 CUL4AQ13619 759 aa14.95□□□□□ -0.02
TRIO-202ENST00000344204 ESR2Q92731 530 aa14.95□□□□□ -0.02
TRIO-202ENST00000344204 PALD1Q9ULE6 856 aa14.95□□□□□ -0.02
TRIO-202ENST00000344204 IFIT1BQ5T764 474 aaKnown RBP14.95□□□□□ -0.02
TRIO-202ENST00000344204 EPS15L1Q9UBC2 864 aa14.95□□□□□ -0.02
TRIO-202ENST00000344204 EEF1DP29692 281 aaKnown RBP14.95□□□□□ -0.02
TRIO-202ENST00000344204 TMED10P49755 219 aaKnown RBP14.95□□□□□ -0.02
TRIO-202ENST00000344204 USP37Q86T82 979 aa14.95□□□□□ -0.02
TRIO-202ENST00000344204 SPZ1Q9BXG8 430 aa14.95□□□□□ -0.02
TRIO-202ENST00000344204 EIF2AQ9BY44 585 aaKnown RBP14.95□□□□□ -0.02
TRIO-202ENST00000344204 PI4KAP2A4QPH2 592 aa14.94□□□□□ -0.02
TRIO-202ENST00000344204 PI4KAP1Q8N8J0 262 aa14.94□□□□□ -0.02
TRIO-202ENST00000344204 EPB41P11171 864 aaKnown RBP14.94□□□□□ -0.02
TRIO-202ENST00000344204 MKNK2Q9HBH9 465 aa14.94□□□□□ -0.02
TRIO-202ENST00000344204 TPCN1Q9ULQ1 816 aa14.94□□□□□ -0.02
TRIO-202ENST00000344204 COMMD10Q9Y6G5 202 aa14.94□□□□□ -0.02
TRIO-202ENST00000344204 RAD23BP54727 409 aa14.94□□□□□ -0.02
TRIO-202ENST00000344204 EVA1CP58658 441 aa14.94□□□□□ -0.02
TRIO-202ENST00000344204 MAPK13O15264 365 aa14.94□□□□□ -0.02
TRIO-202ENST00000344204 KLC1Q07866 573 aa14.94□□□□□ -0.02
TRIO-202ENST00000344204 ACRBPQ8NEB7 543 aa14.94□□□□□ -0.02
TRIO-202ENST00000344204 PASKQ96RG2 1323 aa14.94□□□□□ -0.02
TRIO-202ENST00000344204 USP27XA6NNY8 438 aa14.94□□□□□ -0.02
TRIO-202ENST00000344204 PHBP35232 272 aa14.94□□□□□ -0.02
TRIO-202ENST00000344204 B4GALNT2Q8NHY0 566 aa14.94□□□□□ -0.02
TRIO-202ENST00000344204 CDC5LQ99459 802 aaKnown RBP14.94□□□□□ -0.02
TRIO-202ENST00000344204 MRPL46Q9H2W6 279 aaKnown RBP14.94□□□□□ -0.02
TRIO-202ENST00000344204 MX2P20592 715 aa14.94□□□□□ -0.02
TRIO-202ENST00000344204 PPIP5K1Q6PFW1 1433 aa14.94□□□□□ -0.02
TRIO-202ENST00000344204 TRPA1O75762 1119 aa14.94□□□□□ -0.02
TRIO-202ENST00000344204 PAX7P23759 505 aa14.94□□□□□ -0.02
TRIO-202ENST00000344204 CASP14P31944 242 aa14.94□□□□□ -0.02
TRIO-202ENST00000344204 PDE6CP51160 858 aa14.94□□□□□ -0.02
TRIO-202ENST00000344204 WDR78Q5VTH9 848 aa14.94□□□□□ -0.02
TRIO-202ENST00000344204 ARHGEF11O15085 1522 aa14.94□□□□□ -0.02
TRIO-202ENST00000344204 APOEP02649 317 aa14.93□□□□□ -0.02
TRIO-202ENST00000344204 NCAPH2Q6IBW4 605 aa14.93□□□□□ -0.02
TRIO-202ENST00000344204 KAT14Q9H8E8 782 aa14.93□□□□□ -0.02
TRIO-202ENST00000344204 MMEP08473 750 aa14.93□□□□□ -0.02
TRIO-202ENST00000344204 LGSNQ5TDP6 509 aa14.93□□□□□ -0.02
TRIO-202ENST00000344204 VIPAS39Q9H9C1 493 aa14.93□□□□□ -0.02
TRIO-202ENST00000344204 RNF14Q9UBS8 474 aa14.93□□□□□ -0.02
TRIO-202ENST00000344204 LMNB2Q03252 620 aa14.93□□□□□ -0.02
TRIO-202ENST00000344204 STAMBPL1Q96FJ0 436 aa14.93□□□□□ -0.02
TRIO-202ENST00000344204 DNM2P50570 870 aa14.93□□□□□ -0.02
TRIO-202ENST00000344204 SPATA1Q5VX52 437 aa14.93□□□□□ -0.02
TRIO-202ENST00000344204 TMTC3Q6ZXV5 915 aa14.93□□□□□ -0.02
TRIO-202ENST00000344204 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.93□□□□□ -0.02
TRIO-202ENST00000344204 BPIFA3Q9BQP9 254 aa14.93□□□□□ -0.02
TRIO-202ENST00000344204 H0Y3Z8 333 aa14.93□□□□□ -0.02
TRIO-202ENST00000344204 SPAG7O75391 227 aa14.93□□□□□ -0.02
TRIO-202ENST00000344204 LAMC1P11047 1609 aa14.93□□□□□ -0.02
TRIO-202ENST00000344204 RPL13P26373 211 aaKnown RBP14.93□□□□□ -0.02
TRIO-202ENST00000344204 FAM207AQ9NSI2 230 aaPredicted RBP14.93□□□□□ -0.02
TRIO-202ENST00000344204 TYW1Q9NV66 732 aaKnown RBP14.93□□□□□ -0.02
TRIO-202ENST00000344204 FGFR1OP2Q9NVK5 253 aa14.93□□□□□ -0.02
TRIO-202ENST00000344204 HOOK2Q96ED9 719 aa14.93□□□□□ -0.02
TRIO-202ENST00000344204 ANKRD2Q9GZV1 360 aa14.93□□□□□ -0.02
TRIO-202ENST00000344204 EHHADHQ08426 723 aa14.92□□□□□ -0.02
TRIO-202ENST00000344204 MPHOSPH6Q99547 160 aaKnown RBP14.92□□□□□ -0.02
TRIO-202ENST00000344204 VPS37BQ9H9H4 285 aa14.92□□□□□ -0.02
TRIO-202ENST00000344204 RHBDL2Q9NX52 303 aa14.92□□□□□ -0.02
TRIO-202ENST00000344204 BEND6Q5SZJ8 279 aaPredicted RBP14.92□□□□□ -0.02
TRIO-202ENST00000344204 HEATR3Q7Z4Q2 680 aa14.92□□□□□ -0.02
TRIO-202ENST00000344204 SUGP1Q8IWZ8 645 aaKnown RBP14.92□□□□□ -0.02
TRIO-202ENST00000344204 CCDC85AQ96PX6 553 aaPredicted RBP14.92□□□□□ -0.02
TRIO-202ENST00000344204 DCTN3O75935 186 aa14.92□□□□□ -0.02
TRIO-202ENST00000344204 ATP6V0A4Q9HBG4 840 aa14.92□□□□□ -0.02
TRIO-202ENST00000344204 ANGEL1Q9UNK9 670 aaKnown RBP14.92□□□□□ -0.02
TRIO-202ENST00000344204 MRPS35P82673 323 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms