RNA–Protein interactions for RNA: ENST00000324659.12

NLRC3-201, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 5 BASIC

Gene NLRC3, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-201ENST00000324659 ERFEQ4G0M1 354 aa13.6□□□□□ -0.23
NLRC3-201ENST00000324659 PIK3AP1Q6ZUJ8 805 aa13.6□□□□□ -0.23
NLRC3-201ENST00000324659 EXOC4Q96A65 974 aa13.6□□□□□ -0.23
NLRC3-201ENST00000324659 RABEP2Q9H5N1 569 aa13.6□□□□□ -0.23
NLRC3-201ENST00000324659 ATRNO75882 1429 aa13.6□□□□□ -0.23
NLRC3-201ENST00000324659 PPP1R3GB7ZBB8 358 aa13.6□□□□□ -0.23
NLRC3-201ENST00000324659 NMT2O60551 498 aa13.6□□□□□ -0.23
NLRC3-201ENST00000324659 IBSPP21815 317 aaPredicted RBP13.6□□□□□ -0.23
NLRC3-201ENST00000324659 DYNLL1P63167 89 aaKnown RBP13.6□□□□□ -0.23
NLRC3-201ENST00000324659 CAVIN4Q5BKX8 364 aa13.6□□□□□ -0.23
NLRC3-201ENST00000324659 IFIT1BQ5T764 474 aaKnown RBP13.6□□□□□ -0.23
NLRC3-201ENST00000324659 PTF1AQ7RTS3 328 aa13.6□□□□□ -0.23
NLRC3-201ENST00000324659 NOA1Q8NC60 698 aaKnown RBP13.6□□□□□ -0.23
NLRC3-201ENST00000324659 CAPZA3Q96KX2 299 aa13.6□□□□□ -0.23
NLRC3-201ENST00000324659 GNL3LQ9NVN8 582 aaKnown RBP13.6□□□□□ -0.23
NLRC3-201ENST00000324659 FAN1Q9Y2M0 1017 aa13.6□□□□□ -0.23
NLRC3-201ENST00000324659 MYH8P13535 1937 aa13.6□□□□□ -0.23
NLRC3-201ENST00000324659 PKD1L3Q7Z443 1732 aa13.6□□□□□ -0.23
NLRC3-201ENST00000324659 KRT9P35527 623 aa13.6□□□□□ -0.23
NLRC3-201ENST00000324659 CEP112Q8N8E3 955 aa13.6□□□□□ -0.23
NLRC3-201ENST00000324659 ZNF579Q8NAF0 562 aaKnown RBP13.6□□□□□ -0.23
NLRC3-201ENST00000324659 CHP1Q99653 195 aa13.6□□□□□ -0.23
NLRC3-201ENST00000324659 HDAC6Q9UBN7 1215 aa13.6□□□□□ -0.23
NLRC3-201ENST00000324659 ATP8B1O43520 1251 aa13.59□□□□□ -0.23
NLRC3-201ENST00000324659 IVLP07476 585 aa13.59□□□□□ -0.23
NLRC3-201ENST00000324659 TTC38Q5R3I4 469 aa13.59□□□□□ -0.23
NLRC3-201ENST00000324659 CNGA4Q8IV77 575 aa13.59□□□□□ -0.23
NLRC3-201ENST00000324659 ENAHQ8N8S7 591 aaPredicted RBP13.59□□□□□ -0.23
NLRC3-201ENST00000324659 BANK1Q8NDB2 785 aa13.59□□□□□ -0.23
NLRC3-201ENST00000324659 ESR2Q92731 530 aa13.59□□□□□ -0.23
NLRC3-201ENST00000324659 ZNF512BQ96KM6 892 aaPredicted RBP13.59□□□□□ -0.23
NLRC3-201ENST00000324659 YY1AP1Q9H869 796 aa13.59□□□□□ -0.23
NLRC3-201ENST00000324659 AATFQ9NY61 560 aaKnown RBP eCLIP13.59□□□□□ -0.23
NLRC3-201ENST00000324659 ANKIB1Q9P2G1 1089 aa13.59□□□□□ -0.23
NLRC3-201ENST00000324659 GDAQ9Y2T3 454 aa13.59□□□□□ -0.23
NLRC3-201ENST00000324659 CDHR2Q9BYE9 1310 aa13.59□□□□□ -0.23
NLRC3-201ENST00000324659 CTAGE15A4D2H0 777 aa13.59□□□□□ -0.23
NLRC3-201ENST00000324659 TRIM49BA6NDI0 452 aa13.59□□□□□ -0.23
NLRC3-201ENST00000324659 ZMYND10O75800 440 aa13.59□□□□□ -0.23
NLRC3-201ENST00000324659 CTAGE8P0CG41 777 aa13.59□□□□□ -0.23
NLRC3-201ENST00000324659 VEGFAP15692 232 aaPredicted RBP13.59□□□□□ -0.23
NLRC3-201ENST00000324659 UBXN1Q04323 297 aa13.59□□□□□ -0.23
NLRC3-201ENST00000324659 PKN1Q16512 942 aa13.59□□□□□ -0.23
NLRC3-201ENST00000324659 CTAGE6Q86UF2 777 aa13.59□□□□□ -0.23
NLRC3-201ENST00000324659 CTAGE4Q8IX94 777 aa13.59□□□□□ -0.23
NLRC3-201ENST00000324659 NAPGQ99747 312 aaPredicted RBP13.59□□□□□ -0.23
NLRC3-201ENST00000324659 UBXN6Q9BZV1 441 aa13.59□□□□□ -0.23
NLRC3-201ENST00000324659 DCCP43146 1447 aa13.59□□□□□ -0.23
NLRC3-201ENST00000324659 ADAMTS3O15072 1205 aa13.58□□□□□ -0.23
NLRC3-201ENST00000324659 MNAT1P51948 309 aa13.58□□□□□ -0.23
NLRC3-201ENST00000324659 BRD3Q15059 726 aa13.58□□□□□ -0.23
NLRC3-201ENST00000324659 BEND6Q5SZJ8 279 aaPredicted RBP13.58□□□□□ -0.23
NLRC3-201ENST00000324659 RNF41Q9H4P4 317 aaPredicted RBP13.58□□□□□ -0.23
NLRC3-201ENST00000324659 DDX60Q8IY21 1712 aaKnown RBP13.58□□□□□ -0.24
NLRC3-201ENST00000324659 SRGAP2O75044 1071 aa13.58□□□□□ -0.24
NLRC3-201ENST00000324659 FGFR2P21802 821 aa13.58□□□□□ -0.24
NLRC3-201ENST00000324659 MAGEA9P43362 315 aa13.58□□□□□ -0.24
NLRC3-201ENST00000324659 CATIPQ7Z7H3 387 aa13.58□□□□□ -0.24
NLRC3-201ENST00000324659 SPATA20Q8TB22 786 aa13.58□□□□□ -0.24
NLRC3-201ENST00000324659 CTAGE1Q96RT6 745 aa13.58□□□□□ -0.24
NLRC3-201ENST00000324659 SETDB2Q96T68 719 aa13.58□□□□□ -0.24
NLRC3-201ENST00000324659 ABHD10Q9NUJ1 306 aa13.58□□□□□ -0.24
NLRC3-201ENST00000324659 XDHP47989 1333 aa13.58□□□□□ -0.24
NLRC3-201ENST00000324659 MROH5Q6ZUA9 1318 aa13.58□□□□□ -0.24
NLRC3-201ENST00000324659 ERLIN1O75477 346 aa13.58□□□□□ -0.24
NLRC3-201ENST00000324659 FAM47AQ5JRC9 791 aa13.58□□□□□ -0.24
NLRC3-201ENST00000324659 CDKAL1Q5VV42 579 aa13.58□□□□□ -0.24
NLRC3-201ENST00000324659 RASGRP2Q7LDG7 609 aa13.58□□□□□ -0.24
NLRC3-201ENST00000324659 HDXQ7Z353 690 aa13.58□□□□□ -0.24
NLRC3-201ENST00000324659 NELFBQ8WX92 580 aa13.58□□□□□ -0.24
NLRC3-201ENST00000324659 BRMS1Q9HCU9 246 aa13.58□□□□□ -0.24
NLRC3-201ENST00000324659 RAD21O60216 631 aa13.57□□□□□ -0.24
NLRC3-201ENST00000324659 NLRP5P59047 1200 aa13.57□□□□□ -0.24
NLRC3-201ENST00000324659 TMTC2Q8N394 836 aa13.57□□□□□ -0.24
NLRC3-201ENST00000324659 RASGRP4Q8TDF6 673 aa13.57□□□□□ -0.24
NLRC3-201ENST00000324659 RNF26Q9BY78 433 aaPredicted RBP13.57□□□□□ -0.24
NLRC3-201ENST00000324659 MAGEB6P1A0A0J9YX57 407 aa13.57□□□□□ -0.24
NLRC3-201ENST00000324659 KCNJ18B7U540 433 aa13.57□□□□□ -0.24
NLRC3-201ENST00000324659 COPB1P53618 953 aaKnown RBP13.57□□□□□ -0.24
NLRC3-201ENST00000324659 KCNJ12Q14500 433 aa13.57□□□□□ -0.24
NLRC3-201ENST00000324659 ZSCAN10Q96SZ4 725 aaPredicted RBP13.57□□□□□ -0.24
NLRC3-201ENST00000324659 NAA15Q9BXJ9 866 aaKnown RBP13.57□□□□□ -0.24
NLRC3-201ENST00000324659 PBX1P40424 430 aa13.57□□□□□ -0.24
NLRC3-201ENST00000324659 GPR101Q96P66 508 aaPredicted RBP13.57□□□□□ -0.24
NLRC3-201ENST00000324659 GSDMAQ96QA5 445 aa13.57□□□□□ -0.24
NLRC3-201ENST00000324659 EIF5P55010 431 aaKnown RBP13.56□□□□□ -0.24
NLRC3-201ENST00000324659 PAK1Q13153 545 aa13.56□□□□□ -0.24
NLRC3-201ENST00000324659 ELOA2Q8IYF1 753 aaPredicted RBP13.56□□□□□ -0.24
NLRC3-201ENST00000324659 ANKRD20A12PQ8NF67 263 aa13.56□□□□□ -0.24
NLRC3-201ENST00000324659 PPM1EQ8WY54 764 aa13.56□□□□□ -0.24
NLRC3-201ENST00000324659 NLRP3Q96P20 1036 aa13.56□□□□□ -0.24
NLRC3-201ENST00000324659 PHF20Q9BVI0 1012 aa13.56□□□□□ -0.24
NLRC3-201ENST00000324659 TTF2Q9UNY4 1162 aaKnown RBP13.56□□□□□ -0.24
NLRC3-201ENST00000324659 GNAT2P19087 354 aa13.56□□□□□ -0.24
NLRC3-201ENST00000324659 CASP8Q14790 479 aa13.56□□□□□ -0.24
NLRC3-201ENST00000324659 GSPT2Q8IYD1 628 aaKnown RBP13.56□□□□□ -0.24
NLRC3-201ENST00000324659 PP2D1A8MPX8 630 aa13.55□□□□□ -0.24
NLRC3-201ENST00000324659 MAP2K7O14733 419 aa13.55□□□□□ -0.24
NLRC3-201ENST00000324659 SEC23AQ15436 765 aa13.55□□□□□ -0.24
NLRC3-201ENST00000324659 INTS5Q6P9B9 1019 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms