RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 LRP2BPQ9P2M1 347 aa10.84□□□□□ -0.67
RPGR-201ENST00000318842 EPN1Q9Y6I3 576 aaPredicted RBP10.84□□□□□ -0.67
RPGR-201ENST00000318842 KRT14P02533 472 aa10.83□□□□□ -0.68
RPGR-201ENST00000318842 IFNAR1P17181 557 aa10.83□□□□□ -0.68
RPGR-201ENST00000318842 GYG1P46976 350 aa10.83□□□□□ -0.68
RPGR-201ENST00000318842 TSEN2Q8NCE0 465 aaKnown RBP10.83□□□□□ -0.68
RPGR-201ENST00000318842 MSANTD4Q8NCY6 345 aa10.83□□□□□ -0.68
RPGR-201ENST00000318842 AFAP1L1Q8TED9 768 aa10.83□□□□□ -0.68
RPGR-201ENST00000318842 SMARCC1Q92922 1105 aaPredicted RBP10.83□□□□□ -0.68
RPGR-201ENST00000318842 JAKMIP2Q96AA8 810 aa10.83□□□□□ -0.68
RPGR-201ENST00000318842 LRRC1Q9BTT6 524 aa10.83□□□□□ -0.68
RPGR-201ENST00000318842 SELENOOQ9BVL4 669 aa10.83□□□□□ -0.68
RPGR-201ENST00000318842 GOLPH3Q9H4A6 298 aa10.83□□□□□ -0.68
RPGR-201ENST00000318842 CWC15Q9P013 229 aaKnown RBP10.83□□□□□ -0.68
RPGR-201ENST00000318842 BCCIPQ9P287 314 aaKnown RBP eCLIP10.83□□□□□ -0.68
RPGR-201ENST00000318842 RAB21Q9UL25 225 aa10.83□□□□□ -0.68
RPGR-201ENST00000318842 JRKLQ9Y4A0 524 aa10.83□□□□□ -0.68
RPGR-201ENST00000318842 CAPN6Q9Y6Q1 641 aa10.83□□□□□ -0.68
RPGR-201ENST00000318842 RFX7Q2KHR2 1363 aa10.83□□□□□ -0.68
RPGR-201ENST00000318842 BUB1O43683 1085 aa10.83□□□□□ -0.68
RPGR-201ENST00000318842 GJA10Q969M2 543 aa10.83□□□□□ -0.68
RPGR-201ENST00000318842 LRWD1Q9UFC0 647 aa10.83□□□□□ -0.68
RPGR-201ENST00000318842 MYO1FO00160 1098 aa10.82□□□□□ -0.68
RPGR-201ENST00000318842 EXOC5O00471 708 aa10.82□□□□□ -0.68
RPGR-201ENST00000318842 ERLIN1O75477 346 aa10.82□□□□□ -0.68
RPGR-201ENST00000318842 MOCS3O95396 460 aa10.82□□□□□ -0.68
RPGR-201ENST00000318842 ZFYP08048 801 aaPredicted RBP10.82□□□□□ -0.68
RPGR-201ENST00000318842 IRX3P78415 501 aaPredicted RBP10.82□□□□□ -0.68
RPGR-201ENST00000318842 STIM1Q13586 685 aa10.82□□□□□ -0.68
RPGR-201ENST00000318842 TCP11X2Q5H9J9 407 aa10.82□□□□□ -0.68
RPGR-201ENST00000318842 ENAHQ8N8S7 591 aaPredicted RBP10.82□□□□□ -0.68
RPGR-201ENST00000318842 CENPHQ9H3R5 247 aa10.82□□□□□ -0.68
RPGR-201ENST00000318842 ECM29Q5VYK3 1845 aa10.82□□□□□ -0.68
RPGR-201ENST00000318842 ZNF263O14978 683 aa10.82□□□□□ -0.68
RPGR-201ENST00000318842 ATP2C2O75185 946 aa10.82□□□□□ -0.68
RPGR-201ENST00000318842 FCER1AP12319 257 aa10.82□□□□□ -0.68
RPGR-201ENST00000318842 IDEP14735 1019 aa10.82□□□□□ -0.68
RPGR-201ENST00000318842 GUCY2FP51841 1108 aa10.82□□□□□ -0.68
RPGR-201ENST00000318842 RILPL1Q5EBL4 403 aa10.82□□□□□ -0.68
RPGR-201ENST00000318842 FAM205AQ6ZU69 1335 aa10.82□□□□□ -0.68
RPGR-201ENST00000318842 FAM207AQ9NSI2 230 aaPredicted RBP10.82□□□□□ -0.68
RPGR-201ENST00000318842 ZC3H4Q9UPT8 1303 aaKnown RBP10.82□□□□□ -0.68
RPGR-201ENST00000318842 ZBTB1Q9Y2K1 713 aa10.82□□□□□ -0.68
RPGR-201ENST00000318842 FAM237AA0A1B0GTK4 181 aa10.82□□□□□ -0.68
RPGR-201ENST00000318842 GOLGA6L9A6NEM1 432 aa10.82□□□□□ -0.68
RPGR-201ENST00000318842 PDE8BO95263 885 aa10.82□□□□□ -0.68
RPGR-201ENST00000318842 CYP7A1P22680 504 aa10.82□□□□□ -0.68
RPGR-201ENST00000318842 TTF1Q15361 905 aaPredicted RBP10.82□□□□□ -0.68
RPGR-201ENST00000318842 FILIP1LQ4L180 1135 aa10.82□□□□□ -0.68
RPGR-201ENST00000318842 NT5DC1Q5TFE4 455 aa10.82□□□□□ -0.68
RPGR-201ENST00000318842 TYW1BQ6NUM6 668 aa10.82□□□□□ -0.68
RPGR-201ENST00000318842 CCDC148Q8NFR7 591 aa10.82□□□□□ -0.68
RPGR-201ENST00000318842 GPR108Q9NPR9 543 aa10.82□□□□□ -0.68
RPGR-201ENST00000318842 CIAO1O76071 339 aa10.81□□□□□ -0.68
RPGR-201ENST00000318842 PRPF6O94906 941 aaKnown RBP10.81□□□□□ -0.68
RPGR-201ENST00000318842 PARP1P09874 1014 aaKnown RBP10.81□□□□□ -0.68
RPGR-201ENST00000318842 KLRK1P26718 216 aa10.81□□□□□ -0.68
RPGR-201ENST00000318842 ARID5AQ03989 594 aa10.81□□□□□ -0.68
RPGR-201ENST00000318842 TTC38Q5R3I4 469 aa10.81□□□□□ -0.68
RPGR-201ENST00000318842 ANKLE2Q86XL3 938 aa10.81□□□□□ -0.68
RPGR-201ENST00000318842 MARCH10Q8NA82 808 aaPredicted RBP10.81□□□□□ -0.68
RPGR-201ENST00000318842 GLIS3Q8NEA6 775 aa10.81□□□□□ -0.68
RPGR-201ENST00000318842 SALL4Q9UJQ4 1053 aa10.81□□□□□ -0.68
RPGR-201ENST00000318842 ERICH2A1L162 156 aa10.81□□□□□ -0.68
RPGR-201ENST00000318842 ANKRD18BA2A2Z9 1011 aa10.81□□□□□ -0.68
RPGR-201ENST00000318842 RASSF10A6NK89 507 aa10.81□□□□□ -0.68
RPGR-201ENST00000318842 PATL2C9JE40 543 aaKnown RBP10.81□□□□□ -0.68
RPGR-201ENST00000318842 PCCAP05165 728 aaPredicted RBP10.81□□□□□ -0.68
RPGR-201ENST00000318842 SSBP05455 408 aaKnown RBP eCLIP10.81□□□□□ -0.68
RPGR-201ENST00000318842 FAM153BP0C7A2 387 aa10.81□□□□□ -0.68
RPGR-201ENST00000318842 GOLGA8HP0CJ92 632 aa10.81□□□□□ -0.68
RPGR-201ENST00000318842 USP5P45974 858 aa10.81□□□□□ -0.68
RPGR-201ENST00000318842 USP14P54578 494 aa10.81□□□□□ -0.68
RPGR-201ENST00000318842 GNGT1P63211 74 aa10.81□□□□□ -0.68
RPGR-201ENST00000318842 PAK1Q13153 545 aa10.81□□□□□ -0.68
RPGR-201ENST00000318842 NPY5RQ15761 445 aa10.81□□□□□ -0.68
RPGR-201ENST00000318842 FAM153CQ494X1 144 aa10.81□□□□□ -0.68
RPGR-201ENST00000318842 ZCRB1Q8TBF4 217 aaKnown RBP10.81□□□□□ -0.68
RPGR-201ENST00000318842 BCAS4Q8TDM0 211 aa10.81□□□□□ -0.68
RPGR-201ENST00000318842 ISCA1Q9BUE6 129 aa10.81□□□□□ -0.68
RPGR-201ENST00000318842 TMEM60Q9H2L4 133 aa10.81□□□□□ -0.68
RPGR-201ENST00000318842 FAM153AQ9UHL3 310 aa10.81□□□□□ -0.68
RPGR-201ENST00000318842 CDHR2Q9BYE9 1310 aa10.8□□□□□ -0.68
RPGR-201ENST00000318842 TULP1O00294 542 aaPredicted RBP10.8□□□□□ -0.68
RPGR-201ENST00000318842 DEXIO95424 95 aa10.8□□□□□ -0.68
RPGR-201ENST00000318842 TRIM21P19474 475 aaKnown RBP10.8□□□□□ -0.68
RPGR-201ENST00000318842 SEC24CP53992 1094 aa10.8□□□□□ -0.68
RPGR-201ENST00000318842 EIF5P55010 431 aaKnown RBP10.8□□□□□ -0.68
RPGR-201ENST00000318842 CTSWP56202 376 aa10.8□□□□□ -0.68
RPGR-201ENST00000318842 CCDC96Q2M329 555 aa10.8□□□□□ -0.68
RPGR-201ENST00000318842 ICE2Q659A1 982 aa10.8□□□□□ -0.68
RPGR-201ENST00000318842 CYP26C1Q6V0L0 522 aa10.8□□□□□ -0.68
RPGR-201ENST00000318842 SGMS1Q86VZ5 419 aa10.8□□□□□ -0.68
RPGR-201ENST00000318842 NLRP10Q86W26 655 aa10.8□□□□□ -0.68
RPGR-201ENST00000318842 CNGA4Q8IV77 575 aa10.8□□□□□ -0.68
RPGR-201ENST00000318842 KIRREL3Q8IZU9 778 aa10.8□□□□□ -0.68
RPGR-201ENST00000318842 SRBD1Q8N5C6 995 aaKnown RBP10.8□□□□□ -0.68
RPGR-201ENST00000318842 VGLL2Q8N8G2 317 aa10.8□□□□□ -0.68
RPGR-201ENST00000318842 IFT81Q8WYA0 676 aa10.8□□□□□ -0.68
RPGR-201ENST00000318842 TMEM87BQ96K49 555 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms