RNA–Protein interactions for RNA: ENST00000317173.8

MSRA-201, Transcript of methionine sulfoxide reductase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRA, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-201ENST00000317173 CLIP2Q9UDT6 1046 aa16.37■□□□□ 0.21
MSRA-201ENST00000317173 CSADQ9Y600 493 aa16.37■□□□□ 0.21
MSRA-201ENST00000317173 MANSC4A6NHS7 340 aaPredicted RBP16.36■□□□□ 0.21
MSRA-201ENST00000317173 JAK2O60674 1132 aa16.36■□□□□ 0.21
MSRA-201ENST00000317173 CTNND1O60716 968 aaKnown RBP16.36■□□□□ 0.21
MSRA-201ENST00000317173 TM4SF4P48230 202 aa16.36■□□□□ 0.21
MSRA-201ENST00000317173 INHBEP58166 350 aa16.36■□□□□ 0.21
MSRA-201ENST00000317173 MKRN3Q13064 507 aaKnown RBP16.36■□□□□ 0.21
MSRA-201ENST00000317173 RRP1BQ14684 758 aaKnown RBP16.36■□□□□ 0.21
MSRA-201ENST00000317173 CCDC144CPQ8IYA2 1237 aa16.36■□□□□ 0.21
MSRA-201ENST00000317173 TRIM22Q8IYM9 498 aa16.36■□□□□ 0.21
MSRA-201ENST00000317173 LZTS2Q9BRK4 669 aa16.36■□□□□ 0.21
MSRA-201ENST00000317173 TSKSQ9UJT2 592 aa16.36■□□□□ 0.21
MSRA-201ENST00000317173 ZNF112Q9UJU3 913 aa16.36■□□□□ 0.21
MSRA-201ENST00000317173 EEF2P13639 858 aaKnown RBP16.35■□□□□ 0.21
MSRA-201ENST00000317173 RAB3GAP1Q15042 981 aa16.35■□□□□ 0.21
MSRA-201ENST00000317173 IFFO2Q5TF58 517 aa16.35■□□□□ 0.21
MSRA-201ENST00000317173 TMTC3Q6ZXV5 915 aa16.35■□□□□ 0.21
MSRA-201ENST00000317173 RNF26Q9BY78 433 aaPredicted RBP16.35■□□□□ 0.21
MSRA-201ENST00000317173 ARHGEF10LQ9HCE6 1279 aa16.35■□□□□ 0.21
MSRA-201ENST00000317173 RBM27Q9P2N5 1060 aaKnown RBP16.35■□□□□ 0.21
MSRA-201ENST00000317173 OTOFQ9HC10 1997 aa16.35■□□□□ 0.21
MSRA-201ENST00000317173 TRPA1O75762 1119 aa16.35■□□□□ 0.21
MSRA-201ENST00000317173 FMNL1O95466 1100 aaPredicted RBP16.35■□□□□ 0.21
MSRA-201ENST00000317173 SNHG28P0DPA3 235 aa16.35■□□□□ 0.21
MSRA-201ENST00000317173 SMARCA1P28370 1054 aa16.35■□□□□ 0.21
MSRA-201ENST00000317173 SSRP1Q08945 709 aaKnown RBP16.35■□□□□ 0.21
MSRA-201ENST00000317173 ASPRV1Q53RT3 343 aa16.35■□□□□ 0.21
MSRA-201ENST00000317173 LARP1BQ659C4 914 aaKnown RBP16.35■□□□□ 0.21
MSRA-201ENST00000317173 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.35■□□□□ 0.21
MSRA-201ENST00000317173 GMCL1P1Q8NEA9 526 aa16.35■□□□□ 0.21
MSRA-201ENST00000317173 WASF1Q92558 559 aa16.35■□□□□ 0.21
MSRA-201ENST00000317173 SH2D4AQ9H788 454 aa16.35■□□□□ 0.21
MSRA-201ENST00000317173 ORC3Q9UBD5 711 aaPredicted RBP16.35■□□□□ 0.21
MSRA-201ENST00000317173 PALM3A6NDB9 673 aaPredicted RBP16.34■□□□□ 0.21
MSRA-201ENST00000317173 STX6O43752 255 aa16.34■□□□□ 0.21
MSRA-201ENST00000317173 PARP1P09874 1014 aaKnown RBP16.34■□□□□ 0.21
MSRA-201ENST00000317173 PDHBP11177 359 aa16.34■□□□□ 0.21
MSRA-201ENST00000317173 SYT1P21579 422 aa16.34■□□□□ 0.21
MSRA-201ENST00000317173 VGLL4Q14135 290 aa16.34■□□□□ 0.21
MSRA-201ENST00000317173 LRRC47Q8N1G4 583 aaKnown RBP16.34■□□□□ 0.21
MSRA-201ENST00000317173 DDX11Q96FC9 970 aa16.34■□□□□ 0.21
MSRA-201ENST00000317173 WRNIP1Q96S55 665 aa16.34■□□□□ 0.21
MSRA-201ENST00000317173 ELP3Q9H9T3 547 aa16.34■□□□□ 0.21
MSRA-201ENST00000317173 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.34■□□□□ 0.21
MSRA-201ENST00000317173 BRD1O95696 1058 aa16.33■□□□□ 0.2
MSRA-201ENST00000317173 ALDH1A1P00352 501 aa16.33■□□□□ 0.2
MSRA-201ENST00000317173 FDPSP14324 419 aaKnown RBP16.33■□□□□ 0.2
MSRA-201ENST00000317173 JAG1P78504 1218 aa16.33■□□□□ 0.2
MSRA-201ENST00000317173 ATP2B2Q01814 1243 aa16.33■□□□□ 0.2
MSRA-201ENST00000317173 GPATCH4Q5T3I0 446 aaKnown RBP16.33■□□□□ 0.2
MSRA-201ENST00000317173 NBPF11Q86T75 865 aa16.33■□□□□ 0.2
MSRA-201ENST00000317173 CLEC10AQ8IUN9 316 aa16.33■□□□□ 0.2
MSRA-201ENST00000317173 SIAH1Q8IUQ4 282 aa16.33■□□□□ 0.2
MSRA-201ENST00000317173 SCYL3Q8IZE3 742 aa16.33■□□□□ 0.2
MSRA-201ENST00000317173 DCAF4Q8WV16 495 aa16.33■□□□□ 0.2
MSRA-201ENST00000317173 OPTNQ96CV9 577 aa16.33■□□□□ 0.2
MSRA-201ENST00000317173 MAD2L2Q9UI95 211 aa16.33■□□□□ 0.2
MSRA-201ENST00000317173 TMX2Q9Y320 296 aa16.33■□□□□ 0.2
MSRA-201ENST00000317173 PRPF3O43395 683 aaKnown RBP16.32■□□□□ 0.2
MSRA-201ENST00000317173 DEXIO95424 95 aa16.32■□□□□ 0.2
MSRA-201ENST00000317173 AKAP17AQ02040 695 aaKnown RBP16.32■□□□□ 0.2
MSRA-201ENST00000317173 FUT2Q10981 343 aa16.32■□□□□ 0.2
MSRA-201ENST00000317173 SHROOM1Q2M3G4 852 aaPredicted RBP16.32■□□□□ 0.2
MSRA-201ENST00000317173 NOL9Q5SY16 702 aaKnown RBP16.32■□□□□ 0.2
MSRA-201ENST00000317173 GMCL1Q96IK5 515 aa16.32■□□□□ 0.2
MSRA-201ENST00000317173 SLC26A6Q9BXS9 759 aa16.32■□□□□ 0.2
MSRA-201ENST00000317173 CNTNAP5Q8WYK1 1306 aa16.32■□□□□ 0.2
MSRA-201ENST00000317173 SPDYE5A6NIY4 337 aa16.31■□□□□ 0.2
MSRA-201ENST00000317173 PLEKHA8P1O95397 391 aa16.31■□□□□ 0.2
MSRA-201ENST00000317173 ERO1BQ86YB8 467 aa16.31■□□□□ 0.2
MSRA-201ENST00000317173 PHKBQ93100 1093 aa16.31■□□□□ 0.2
MSRA-201ENST00000317173 SPZ1Q9BXG8 430 aa16.31■□□□□ 0.2
MSRA-201ENST00000317173 CFHR5Q9BXR6 569 aa16.31■□□□□ 0.2
MSRA-201ENST00000317173 SNCAIPQ9Y6H5 919 aa16.31■□□□□ 0.2
MSRA-201ENST00000317173 PHIPQ8WWQ0 1821 aa16.31■□□□□ 0.2
MSRA-201ENST00000317173 USP17L5A8MUK1 530 aa16.3■□□□□ 0.2
MSRA-201ENST00000317173 KLRF2D3W0D1 207 aa16.3■□□□□ 0.2
MSRA-201ENST00000317173 F5H6K3 240 aa16.3■□□□□ 0.2
MSRA-201ENST00000317173 GJA5P36382 358 aa16.3■□□□□ 0.2
MSRA-201ENST00000317173 KLRC3Q07444 240 aa16.3■□□□□ 0.2
MSRA-201ENST00000317173 ZNF543Q08ER8 600 aa16.3■□□□□ 0.2
MSRA-201ENST00000317173 SLFN13Q68D06 897 aa16.3■□□□□ 0.2
MSRA-201ENST00000317173 OTUD7BQ6GQQ9 843 aa16.3■□□□□ 0.2
MSRA-201ENST00000317173 IFNL1Q8IU54 200 aa16.3■□□□□ 0.2
MSRA-201ENST00000317173 SRBD1Q8N5C6 995 aaKnown RBP16.3■□□□□ 0.2
MSRA-201ENST00000317173 AS3MTQ9HBK9 375 aa16.3■□□□□ 0.2
MSRA-201ENST00000317173 GOPCQ9HD26 462 aa16.3■□□□□ 0.2
MSRA-201ENST00000317173 TESPA1A2RU30 521 aaPredicted RBP16.29■□□□□ 0.2
MSRA-201ENST00000317173 H3BQV1 296 aa16.29■□□□□ 0.2
MSRA-201ENST00000317173 ZSCAN22P10073 491 aaPredicted RBP16.29■□□□□ 0.2
MSRA-201ENST00000317173 INPP5BP32019 993 aa16.29■□□□□ 0.2
MSRA-201ENST00000317173 GTF2A2P52657 109 aa16.29■□□□□ 0.2
MSRA-201ENST00000317173 PKP1Q13835 747 aa16.29■□□□□ 0.2
MSRA-201ENST00000317173 NOM1Q5C9Z4 860 aaKnown RBP16.29■□□□□ 0.2
MSRA-201ENST00000317173 USP17L2Q6R6M4 530 aa16.29■□□□□ 0.2
MSRA-201ENST00000317173 STAG2Q8N3U4 1231 aa16.29■□□□□ 0.2
MSRA-201ENST00000317173 OTUD5Q96G74 571 aa16.29■□□□□ 0.2
MSRA-201ENST00000317173 C8orf76Q96K31 380 aa16.29■□□□□ 0.2
MSRA-201ENST00000317173 ALG1Q9BT22 464 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms