RNA–Protein interactions for RNA: ENST00000317118.12

PDE4D-202, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 2,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-202ENST00000317118 LPAR1Q92633 364 aa6.86□□□□□ -1.31
PDE4D-202ENST00000317118 ZKSCAN4Q969J2 545 aaPredicted RBP6.86□□□□□ -1.31
PDE4D-202ENST00000317118 C12orf42Q96LP6 360 aa6.86□□□□□ -1.31
PDE4D-202ENST00000317118 VCPKMTQ9H867 229 aa6.86□□□□□ -1.31
PDE4D-202ENST00000317118 GOPCQ9HD26 462 aa6.86□□□□□ -1.31
PDE4D-202ENST00000317118 RBM27Q9P2N5 1060 aaKnown RBP6.86□□□□□ -1.31
PDE4D-202ENST00000317118 PASKQ96RG2 1323 aa6.86□□□□□ -1.31
PDE4D-202ENST00000317118 F5H6K3 240 aa6.86□□□□□ -1.31
PDE4D-202ENST00000317118 POTEB2H3BUK9 544 aa6.86□□□□□ -1.31
PDE4D-202ENST00000317118 CPLX1O14810 134 aa6.86□□□□□ -1.31
PDE4D-202ENST00000317118 RAD21O60216 631 aa6.86□□□□□ -1.31
PDE4D-202ENST00000317118 CTDNEP1O95476 244 aa6.86□□□□□ -1.31
PDE4D-202ENST00000317118 PARP1P09874 1014 aaKnown RBP6.86□□□□□ -1.31
PDE4D-202ENST00000317118 ADD1P35611 737 aaKnown RBP6.86□□□□□ -1.31
PDE4D-202ENST00000317118 CCT2P78371 535 aaKnown RBP6.86□□□□□ -1.31
PDE4D-202ENST00000317118 KLRC3Q07444 240 aa6.86□□□□□ -1.31
PDE4D-202ENST00000317118 ZNF543Q08ER8 600 aa6.86□□□□□ -1.31
PDE4D-202ENST00000317118 FUT2Q10981 343 aa6.86□□□□□ -1.31
PDE4D-202ENST00000317118 STK3Q13188 491 aa6.86□□□□□ -1.31
PDE4D-202ENST00000317118 VGLL4Q14135 290 aa6.86□□□□□ -1.31
PDE4D-202ENST00000317118 SH3D19Q5HYK7 790 aa6.86□□□□□ -1.31
PDE4D-202ENST00000317118 SLFN13Q68D06 897 aa6.86□□□□□ -1.31
PDE4D-202ENST00000317118 DLK2Q6UY11 383 aa6.86□□□□□ -1.31
PDE4D-202ENST00000317118 TMTC3Q6ZXV5 915 aa6.86□□□□□ -1.31
PDE4D-202ENST00000317118 NBPF11Q86T75 865 aa6.86□□□□□ -1.31
PDE4D-202ENST00000317118 FAM177A1Q8N128 213 aaPredicted RBP6.86□□□□□ -1.31
PDE4D-202ENST00000317118 ZNF280CQ8ND82 737 aa6.86□□□□□ -1.31
PDE4D-202ENST00000317118 SMC1BQ8NDV3 1235 aa6.86□□□□□ -1.31
PDE4D-202ENST00000317118 ZNF526Q8TF50 670 aaPredicted RBP6.86□□□□□ -1.31
PDE4D-202ENST00000317118 NUP133Q8WUM0 1156 aa6.86□□□□□ -1.31
PDE4D-202ENST00000317118 MYL10Q9BUA6 226 aa6.86□□□□□ -1.31
PDE4D-202ENST00000317118 RNF26Q9BY78 433 aaPredicted RBP6.86□□□□□ -1.31
PDE4D-202ENST00000317118 SMC3Q9UQE7 1217 aa6.86□□□□□ -1.31
PDE4D-202ENST00000317118 KIF3AQ9Y496 699 aa6.86□□□□□ -1.31
PDE4D-202ENST00000317118 AFG3L2Q9Y4W6 797 aa6.86□□□□□ -1.31
PDE4D-202ENST00000317118 POLR2AP24928 1970 aaKnown RBP6.86□□□□□ -1.31
PDE4D-202ENST00000317118 OTOFQ9HC10 1997 aa6.85□□□□□ -1.31
PDE4D-202ENST00000317118 SPDYE5A6NIY4 337 aa6.85□□□□□ -1.31
PDE4D-202ENST00000317118 USP17L10C9JJH3 530 aa6.85□□□□□ -1.31
PDE4D-202ENST00000317118 TRAF5O00463 557 aa6.85□□□□□ -1.31
PDE4D-202ENST00000317118 CLSTN1O94985 981 aa6.85□□□□□ -1.31
PDE4D-202ENST00000317118 FMNL1O95466 1100 aaPredicted RBP6.85□□□□□ -1.31
PDE4D-202ENST00000317118 HSP90AA1P07900 732 aaKnown RBP6.85□□□□□ -1.31
PDE4D-202ENST00000317118 BACE1P56817 501 aa6.85□□□□□ -1.31
PDE4D-202ENST00000317118 BTNL9Q6UXG8 535 aa6.85□□□□□ -1.31
PDE4D-202ENST00000317118 ERO1BQ86YB8 467 aa6.85□□□□□ -1.31
PDE4D-202ENST00000317118 CLEC10AQ8IUN9 316 aa6.85□□□□□ -1.31
PDE4D-202ENST00000317118 LRRC47Q8N1G4 583 aaKnown RBP6.85□□□□□ -1.31
PDE4D-202ENST00000317118 C2orf69Q8N8R5 385 aa6.85□□□□□ -1.31
PDE4D-202ENST00000317118 ACER1Q8TDN7 264 aa6.85□□□□□ -1.31
PDE4D-202ENST00000317118 SPZ1Q9BXG8 430 aa6.85□□□□□ -1.31
PDE4D-202ENST00000317118 NCOA5Q9HCD5 579 aaKnown RBP6.85□□□□□ -1.31
PDE4D-202ENST00000317118 GBA2Q9HCG7 927 aaPredicted RBP6.85□□□□□ -1.31
PDE4D-202ENST00000317118 CIZ1Q9ULV3 898 aaPredicted RBP6.85□□□□□ -1.31
PDE4D-202ENST00000317118 NAP1L2Q9ULW6 460 aaPredicted RBP6.85□□□□□ -1.31
PDE4D-202ENST00000317118 MTMR7Q9Y216 660 aa6.85□□□□□ -1.31
PDE4D-202ENST00000317118 PHIPQ8WWQ0 1821 aa6.85□□□□□ -1.31
PDE4D-202ENST00000317118 CXCL11O14625 94 aa6.85□□□□□ -1.31
PDE4D-202ENST00000317118 WDR46O15213 610 aaKnown RBP6.85□□□□□ -1.31
PDE4D-202ENST00000317118 PRPF3O43395 683 aaKnown RBP6.85□□□□□ -1.31
PDE4D-202ENST00000317118 TOMM70O94826 608 aa6.85□□□□□ -1.31
PDE4D-202ENST00000317118 NDUFB10O96000 172 aa6.85□□□□□ -1.31
PDE4D-202ENST00000317118 ECE1P42892 770 aa6.85□□□□□ -1.31
PDE4D-202ENST00000317118 ATP2B2Q01814 1243 aa6.85□□□□□ -1.31
PDE4D-202ENST00000317118 FSTL1Q12841 308 aa6.85□□□□□ -1.31
PDE4D-202ENST00000317118 PPIL2Q13356 520 aa6.85□□□□□ -1.31
PDE4D-202ENST00000317118 FOXD4L5Q5VV16 416 aaPredicted RBP6.85□□□□□ -1.31
PDE4D-202ENST00000317118 USP17L2Q6R6M4 530 aa6.85□□□□□ -1.31
PDE4D-202ENST00000317118 KCTD17Q8N5Z5 321 aa6.85□□□□□ -1.31
PDE4D-202ENST00000317118 FOXD4L4Q8WXT5 416 aaPredicted RBP6.85□□□□□ -1.31
PDE4D-202ENST00000317118 WASF1Q92558 559 aa6.85□□□□□ -1.31
PDE4D-202ENST00000317118 RIOX1Q9H6W3 641 aa6.85□□□□□ -1.31
PDE4D-202ENST00000317118 SCUBE2Q9NQ36 999 aa6.85□□□□□ -1.31
PDE4D-202ENST00000317118 KCNH4Q9UQ05 1017 aa6.85□□□□□ -1.31
PDE4D-202ENST00000317118 MYH4Q9Y623 1939 aa6.84□□□□□ -1.31
PDE4D-202ENST00000317118 PTPDC1A2A3K4 754 aa6.84□□□□□ -1.31
PDE4D-202ENST00000317118 KLRF2D3W0D1 207 aa6.84□□□□□ -1.31
PDE4D-202ENST00000317118 CELF2O95319 508 aaKnown RBP6.84□□□□□ -1.31
PDE4D-202ENST00000317118 DEXIO95424 95 aa6.84□□□□□ -1.31
PDE4D-202ENST00000317118 BMP3P12645 472 aa6.84□□□□□ -1.31
PDE4D-202ENST00000317118 RXRAP19793 462 aa6.84□□□□□ -1.31
PDE4D-202ENST00000317118 PDCP20941 246 aa6.84□□□□□ -1.31
PDE4D-202ENST00000317118 GJB2P29033 226 aa6.84□□□□□ -1.31
PDE4D-202ENST00000317118 SLC1A4P43007 532 aa6.84□□□□□ -1.31
PDE4D-202ENST00000317118 SLC4A3P48751 1232 aa6.84□□□□□ -1.31
PDE4D-202ENST00000317118 SSRP1Q08945 709 aaKnown RBP6.84□□□□□ -1.31
PDE4D-202ENST00000317118 TTLL12Q14166 644 aaPredicted RBP6.84□□□□□ -1.31
PDE4D-202ENST00000317118 TRIM22Q8IYM9 498 aa6.84□□□□□ -1.31
PDE4D-202ENST00000317118 CNPY4Q8N129 248 aa6.84□□□□□ -1.31
PDE4D-202ENST00000317118 SRBD1Q8N5C6 995 aaKnown RBP6.84□□□□□ -1.31
PDE4D-202ENST00000317118 MTMR8Q96EF0 704 aa6.84□□□□□ -1.31
PDE4D-202ENST00000317118 FZD1Q9UP38 647 aa6.84□□□□□ -1.31
PDE4D-202ENST00000317118 ZHX2Q9Y6X8 837 aa6.84□□□□□ -1.31
PDE4D-202ENST00000317118 CNTNAP5Q8WYK1 1306 aa6.84□□□□□ -1.31
PDE4D-202ENST00000317118 PLEKHA8P1O95397 391 aa6.84□□□□□ -1.31
PDE4D-202ENST00000317118 FDPSP14324 419 aaKnown RBP6.84□□□□□ -1.31
PDE4D-202ENST00000317118 SPP2Q13103 211 aa6.84□□□□□ -1.31
PDE4D-202ENST00000317118 PRKG1Q13976 671 aa6.84□□□□□ -1.31
PDE4D-202ENST00000317118 CST9Q5W186 159 aa6.84□□□□□ -1.31
PDE4D-202ENST00000317118 FAM160B2Q86V87 743 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms