RNA–Protein interactions for RNA: ENST00000299366.11

CDH23-202, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-202ENST00000299366 CYP2D6P10635 497 aa16.51■□□□□ 0.23
CDH23-202ENST00000299366 EEF2P13639 858 aaKnown RBP16.51■□□□□ 0.23
CDH23-202ENST00000299366 CALCRLQ16602 461 aa16.51■□□□□ 0.23
CDH23-202ENST00000299366 FAM76AQ8TAV0 307 aa16.51■□□□□ 0.23
CDH23-202ENST00000299366 SORBS3O60504 671 aa16.5■□□□□ 0.23
CDH23-202ENST00000299366 UBE3CQ15386 1083 aa16.5■□□□□ 0.23
CDH23-202ENST00000299366 KCTD16Q68DU8 428 aa16.5■□□□□ 0.23
CDH23-202ENST00000299366 HS2ST1Q7LGA3 356 aa16.5■□□□□ 0.23
CDH23-202ENST00000299366 NDUFAB1O14561 156 aa16.5■□□□□ 0.23
CDH23-202ENST00000299366 CTIFO43310 598 aaKnown RBP16.5■□□□□ 0.23
CDH23-202ENST00000299366 ARHGAP44Q17R89 818 aa16.5■□□□□ 0.23
CDH23-202ENST00000299366 GRIPAP1Q4V328 841 aa16.5■□□□□ 0.23
CDH23-202ENST00000299366 FERMT2Q96AC1 680 aa16.5■□□□□ 0.23
CDH23-202ENST00000299366 NYXQ9GZU5 481 aa16.5■□□□□ 0.23
CDH23-202ENST00000299366 SENP2Q9HC62 589 aa16.5■□□□□ 0.23
CDH23-202ENST00000299366 GDAQ9Y2T3 454 aa16.5■□□□□ 0.23
CDH23-202ENST00000299366 CPSF1Q10570 1443 aaKnown RBP16.5■□□□□ 0.23
CDH23-202ENST00000299366 USP17L3A6NCW0 530 aa16.5■□□□□ 0.23
CDH23-202ENST00000299366 USP17L4A6NCW7 530 aa16.5■□□□□ 0.23
CDH23-202ENST00000299366 SH2B2O14492 632 aaPredicted RBP16.5■□□□□ 0.23
CDH23-202ENST00000299366 USP17L1Q7RTZ2 530 aa16.5■□□□□ 0.23
CDH23-202ENST00000299366 DPF2Q92785 391 aa16.5■□□□□ 0.23
CDH23-202ENST00000299366 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.5■□□□□ 0.23
CDH23-202ENST00000299366 H7C1W4 665 aa16.49■□□□□ 0.23
CDH23-202ENST00000299366 GUCY1A2P33402 732 aa16.49■□□□□ 0.23
CDH23-202ENST00000299366 SLC16A2P36021 539 aa16.49■□□□□ 0.23
CDH23-202ENST00000299366 MRPL12P52815 198 aaKnown RBP16.49■□□□□ 0.23
CDH23-202ENST00000299366 ZSCAN26Q16670 478 aa16.49■□□□□ 0.23
CDH23-202ENST00000299366 MSL1Q68DK7 614 aa16.49■□□□□ 0.23
CDH23-202ENST00000299366 KIAA0825Q8IV33 1275 aa16.49■□□□□ 0.23
CDH23-202ENST00000299366 ANKRD2Q9GZV1 360 aa16.49■□□□□ 0.23
CDH23-202ENST00000299366 SAR1BQ9Y6B6 198 aa16.49■□□□□ 0.23
CDH23-202ENST00000299366 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.49■□□□□ 0.23
CDH23-202ENST00000299366 FAM205CA6NFA0 338 aa16.49■□□□□ 0.23
CDH23-202ENST00000299366 SUSD4Q5VX71 490 aa16.49■□□□□ 0.23
CDH23-202ENST00000299366 USP17L2Q6R6M4 530 aa16.49■□□□□ 0.23
CDH23-202ENST00000299366 TTC16Q8NEE8 873 aa16.49■□□□□ 0.23
CDH23-202ENST00000299366 NEDD4P46934 1319 aa16.49■□□□□ 0.23
CDH23-202ENST00000299366 OTUD6BQ8N6M0 293 aa16.49■□□□□ 0.23
CDH23-202ENST00000299366 SLC44A5Q8NCS7 719 aa16.49■□□□□ 0.23
CDH23-202ENST00000299366 SRP68Q9UHB9 627 aaKnown RBP16.49■□□□□ 0.23
CDH23-202ENST00000299366 GOLGA6CA6NDK9 693 aa16.48■□□□□ 0.23
CDH23-202ENST00000299366 GOLGA6DP0CG33 693 aa16.48■□□□□ 0.23
CDH23-202ENST00000299366 SPATA1Q5VX52 437 aa16.48■□□□□ 0.23
CDH23-202ENST00000299366 CPLX4Q7Z7G2 160 aa16.48■□□□□ 0.23
CDH23-202ENST00000299366 SPICE1Q8N0Z3 855 aa16.48■□□□□ 0.23
CDH23-202ENST00000299366 GOLGA6AQ9NYA3 693 aa16.48■□□□□ 0.23
CDH23-202ENST00000299366 EPN1Q9Y6I3 576 aaPredicted RBP16.48■□□□□ 0.23
CDH23-202ENST00000299366 UBXN2AP68543 259 aa16.48■□□□□ 0.23
CDH23-202ENST00000299366 MTF1Q14872 753 aa16.48■□□□□ 0.23
CDH23-202ENST00000299366 USP49Q70CQ1 688 aa16.48■□□□□ 0.23
CDH23-202ENST00000299366 GIMAP7Q8NHV1 300 aa16.48■□□□□ 0.23
CDH23-202ENST00000299366 STRBPQ96SI9 672 aaKnown RBP16.48■□□□□ 0.23
CDH23-202ENST00000299366 A2ML1A8K2U0 1454 aa16.48■□□□□ 0.23
CDH23-202ENST00000299366 TUBB4AP04350 444 aa16.48■□□□□ 0.23
CDH23-202ENST00000299366 RPN1P04843 607 aaKnown RBP16.48■□□□□ 0.23
CDH23-202ENST00000299366 IRX5P78411 483 aaPredicted RBP16.48■□□□□ 0.23
CDH23-202ENST00000299366 KLHL30Q0D2K2 578 aa16.48■□□□□ 0.23
CDH23-202ENST00000299366 ERFEQ4G0M1 354 aa16.48■□□□□ 0.23
CDH23-202ENST00000299366 CCDC65Q8IXS2 484 aa16.48■□□□□ 0.23
CDH23-202ENST00000299366 AFAP1L1Q8TED9 768 aa16.48■□□□□ 0.23
CDH23-202ENST00000299366 TBC1D5Q92609 795 aa16.48■□□□□ 0.23
CDH23-202ENST00000299366 SELENOOQ9BVL4 669 aa16.48■□□□□ 0.23
CDH23-202ENST00000299366 GOLGA6BA6NDN3 693 aa16.47■□□□□ 0.23
CDH23-202ENST00000299366 PRR29P0C7W0 189 aa16.47■□□□□ 0.23
CDH23-202ENST00000299366 PRDX5P30044 214 aa16.47■□□□□ 0.23
CDH23-202ENST00000299366 SF3B2Q13435 895 aaKnown RBP16.47■□□□□ 0.23
CDH23-202ENST00000299366 CNNM4Q6P4Q7 775 aa16.47■□□□□ 0.23
CDH23-202ENST00000299366 CCDC50Q8IVM0 306 aa16.47■□□□□ 0.23
CDH23-202ENST00000299366 OGFOD1Q8N543 542 aa16.47■□□□□ 0.23
CDH23-202ENST00000299366 PLEKHG1Q9ULL1 1385 aa16.47■□□□□ 0.23
CDH23-202ENST00000299366 SLFN14P0C7P3 912 aa16.47■□□□□ 0.23
CDH23-202ENST00000299366 COA7Q96BR5 231 aa16.47■□□□□ 0.23
CDH23-202ENST00000299366 COL3A1P02461 1466 aaPredicted RBP16.47■□□□□ 0.23
CDH23-202ENST00000299366 TRIM49BA6NDI0 452 aa16.47■□□□□ 0.23
CDH23-202ENST00000299366 TEX33O43247 280 aa16.47■□□□□ 0.23
CDH23-202ENST00000299366 PNMA6AP0CW24 399 aaPredicted RBP16.47■□□□□ 0.23
CDH23-202ENST00000299366 PRKG1Q13976 671 aa16.47■□□□□ 0.23
CDH23-202ENST00000299366 TTLL12Q14166 644 aaPredicted RBP16.47■□□□□ 0.23
CDH23-202ENST00000299366 GGA1Q9UJY5 639 aa16.47■□□□□ 0.23
CDH23-202ENST00000299366 MMP1P03956 469 aa16.46■□□□□ 0.23
CDH23-202ENST00000299366 CETN2P41208 172 aa16.46■□□□□ 0.23
CDH23-202ENST00000299366 COPB1P53618 953 aaKnown RBP16.46■□□□□ 0.23
CDH23-202ENST00000299366 TOGARAM2Q6ZUX3 1019 aa16.46■□□□□ 0.23
CDH23-202ENST00000299366 FMR1NBQ8N0W7 255 aaPredicted RBP16.46■□□□□ 0.23
CDH23-202ENST00000299366 SMCR8Q8TEV9 937 aaPredicted RBP16.46■□□□□ 0.23
CDH23-202ENST00000299366 LRRC27Q9C0I9 530 aa16.46■□□□□ 0.23
CDH23-202ENST00000299366 MED23Q9ULK4 1368 aa16.46■□□□□ 0.23
CDH23-202ENST00000299366 PP2D1A8MPX8 630 aa16.46■□□□□ 0.23
CDH23-202ENST00000299366 CETN3O15182 167 aa16.46■□□□□ 0.23
CDH23-202ENST00000299366 GBP2P32456 591 aaPredicted RBP16.46■□□□□ 0.23
CDH23-202ENST00000299366 ST3GAL1Q11201 340 aa16.46■□□□□ 0.23
CDH23-202ENST00000299366 KCNK9Q9NPC2 374 aa16.46■□□□□ 0.23
CDH23-202ENST00000299366 MORC2Q9Y6X9 1032 aaPredicted RBP16.46■□□□□ 0.23
CDH23-202ENST00000299366 HEG1Q9ULI3 1381 aa16.46■□□□□ 0.23
CDH23-202ENST00000299366 CRB1P82279 1406 aa16.46■□□□□ 0.23
CDH23-202ENST00000299366 GCNT3O95395 438 aa16.46■□□□□ 0.23
CDH23-202ENST00000299366 POTEJP0CG39 1038 aa16.46■□□□□ 0.23
CDH23-202ENST00000299366 VPS41P49754 854 aa16.46■□□□□ 0.23
CDH23-202ENST00000299366 OPA1O60313 960 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms