RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 TRPC3Q13507 836 aa12.16□□□□□ -0.46
PBRM1-201ENST00000296302 U2AF1L4Q8WU68 220 aaKnown RBP12.16□□□□□ -0.46
PBRM1-201ENST00000296302 EDC3Q96F86 508 aaKnown RBP12.16□□□□□ -0.46
PBRM1-201ENST00000296302 PLEKHA4Q9H4M7 779 aa12.16□□□□□ -0.46
PBRM1-201ENST00000296302 ZNF608Q9ULD9 1512 aaPredicted RBP12.16□□□□□ -0.46
PBRM1-201ENST00000296302 SUN1O94901 812 aa12.16□□□□□ -0.46
PBRM1-201ENST00000296302 ADCK5Q3MIX3 580 aa12.16□□□□□ -0.46
PBRM1-201ENST00000296302 RETREG2Q8NC44 543 aa12.16□□□□□ -0.46
PBRM1-201ENST00000296302 GRK7Q8WTQ7 553 aa12.16□□□□□ -0.46
PBRM1-201ENST00000296302 FAM212AQ96EL1 285 aa12.16□□□□□ -0.46
PBRM1-201ENST00000296302 SPATS2LQ9NUQ6 558 aaKnown RBP12.16□□□□□ -0.46
PBRM1-201ENST00000296302 PCDH11XQ9BZA7 1347 aa12.16□□□□□ -0.46
PBRM1-201ENST00000296302 PCDH11YQ9BZA8 1340 aa12.16□□□□□ -0.46
PBRM1-201ENST00000296302 EXOC3O60645 756 aa12.16□□□□□ -0.46
PBRM1-201ENST00000296302 RPN1P04843 607 aaKnown RBP12.16□□□□□ -0.46
PBRM1-201ENST00000296302 SF3A3Q12874 501 aaKnown RBP eCLIP12.16□□□□□ -0.46
PBRM1-201ENST00000296302 PPP1R21Q6ZMI0 780 aa12.16□□□□□ -0.46
PBRM1-201ENST00000296302 TEX11Q8IYF3 940 aa12.16□□□□□ -0.46
PBRM1-201ENST00000296302 AFAP1L2Q8N4X5 818 aa12.16□□□□□ -0.46
PBRM1-201ENST00000296302 CLIC6Q96NY7 704 aa12.16□□□□□ -0.46
PBRM1-201ENST00000296302 VPS37BQ9H9H4 285 aa12.16□□□□□ -0.46
PBRM1-201ENST00000296302 LARSQ9P2J5 1176 aaKnown RBP12.16□□□□□ -0.46
PBRM1-201ENST00000296302 KDRP35968 1356 aa12.15□□□□□ -0.46
PBRM1-201ENST00000296302 ERBB4Q15303 1308 aa12.15□□□□□ -0.46
PBRM1-201ENST00000296302 SH3TC1Q8TE82 1336 aa12.15□□□□□ -0.46
PBRM1-201ENST00000296302 ARHGEF35A5YM69 484 aa12.15□□□□□ -0.46
PBRM1-201ENST00000296302 TAF5LO75529 589 aa12.15□□□□□ -0.46
PBRM1-201ENST00000296302 TBC1D8O95759 1140 aa12.15□□□□□ -0.46
PBRM1-201ENST00000296302 ADD1P35611 737 aaKnown RBP12.15□□□□□ -0.46
PBRM1-201ENST00000296302 PARP10Q53GL7 1025 aa12.15□□□□□ -0.46
PBRM1-201ENST00000296302 TRIM68Q6AZZ1 485 aa12.15□□□□□ -0.46
PBRM1-201ENST00000296302 SARM1Q6SZW1 724 aa12.15□□□□□ -0.46
PBRM1-201ENST00000296302 SPATA5Q8NB90 893 aa12.15□□□□□ -0.46
PBRM1-201ENST00000296302 PDLIM2Q96JY6 352 aa12.15□□□□□ -0.46
PBRM1-201ENST00000296302 GPCPD1Q9NPB8 672 aa12.15□□□□□ -0.46
PBRM1-201ENST00000296302 RNF14Q9UBS8 474 aa12.15□□□□□ -0.46
PBRM1-201ENST00000296302 KDM3AQ9Y4C1 1321 aa12.15□□□□□ -0.46
PBRM1-201ENST00000296302 LRRD1A4D1F6 860 aa12.15□□□□□ -0.46
PBRM1-201ENST00000296302 BUB1O43683 1085 aa12.15□□□□□ -0.46
PBRM1-201ENST00000296302 TRIM37O94972 964 aa12.15□□□□□ -0.46
PBRM1-201ENST00000296302 XRCC5P13010 732 aaKnown RBP12.15□□□□□ -0.46
PBRM1-201ENST00000296302 DPH6Q7L8W6 267 aa12.15□□□□□ -0.46
PBRM1-201ENST00000296302 GPIHBP1Q8IV16 184 aa12.15□□□□□ -0.46
PBRM1-201ENST00000296302 VSTM4Q8IW00 320 aa12.15□□□□□ -0.46
PBRM1-201ENST00000296302 ACTR5Q9H9F9 607 aaPredicted RBP12.15□□□□□ -0.46
PBRM1-201ENST00000296302 NEURL1BA8MQ27 555 aa12.15□□□□□ -0.46
PBRM1-201ENST00000296302 REXO1Q8N1G1 1221 aaKnown RBP12.15□□□□□ -0.46
PBRM1-201ENST00000296302 FANCBQ8NB91 859 aa12.15□□□□□ -0.46
PBRM1-201ENST00000296302 RUNDC3BQ96NL0 473 aa12.15□□□□□ -0.46
PBRM1-201ENST00000296302 MAGEF1Q9HAY2 307 aa12.15□□□□□ -0.46
PBRM1-201ENST00000296302 TYW1Q9NV66 732 aaKnown RBP12.15□□□□□ -0.46
PBRM1-201ENST00000296302 ABCC10Q5T3U5 1492 aa12.15□□□□□ -0.47
PBRM1-201ENST00000296302 B4DLN1 442 aa12.15□□□□□ -0.47
PBRM1-201ENST00000296302 H2AFZP0C0S5 128 aa12.15□□□□□ -0.47
PBRM1-201ENST00000296302 EEF1GP26641 437 aaKnown RBP12.15□□□□□ -0.47
PBRM1-201ENST00000296302 RBBP5Q15291 538 aaKnown RBP12.15□□□□□ -0.47
PBRM1-201ENST00000296302 H2AFVQ71UI9 128 aa12.15□□□□□ -0.47
PBRM1-201ENST00000296302 LGR6Q9HBX8 967 aa12.15□□□□□ -0.47
PBRM1-201ENST00000296302 KIAA0556O60303 1618 aa12.14□□□□□ -0.47
PBRM1-201ENST00000296302 BTBD18B2RXH4 712 aa12.14□□□□□ -0.47
PBRM1-201ENST00000296302 EVI5O60447 810 aa12.14□□□□□ -0.47
PBRM1-201ENST00000296302 KCTD16Q68DU8 428 aa12.14□□□□□ -0.47
PBRM1-201ENST00000296302 NCAPH2Q6IBW4 605 aa12.14□□□□□ -0.47
PBRM1-201ENST00000296302 NSUN7Q8NE18 718 aaKnown RBP12.14□□□□□ -0.47
PBRM1-201ENST00000296302 PLEKHF1Q96S99 279 aa12.14□□□□□ -0.47
PBRM1-201ENST00000296302 DPH5Q9H2P9 285 aa12.14□□□□□ -0.47
PBRM1-201ENST00000296302 ZBTB21Q9ULJ3 1066 aa12.14□□□□□ -0.47
PBRM1-201ENST00000296302 KDM5AP29375 1690 aaKnown RBP12.14□□□□□ -0.47
PBRM1-201ENST00000296302 ERCC3P19447 782 aa12.14□□□□□ -0.47
PBRM1-201ENST00000296302 LONP1P36776 959 aaKnown RBP12.14□□□□□ -0.47
PBRM1-201ENST00000296302 CCDC13Q8IYE1 715 aa12.14□□□□□ -0.47
PBRM1-201ENST00000296302 RNF168Q8IYW5 571 aaPredicted RBP12.14□□□□□ -0.47
PBRM1-201ENST00000296302 C19orf44Q9H6X5 657 aa12.14□□□□□ -0.47
PBRM1-201ENST00000296302 TBC1D7Q9P0N9 293 aa12.14□□□□□ -0.47
PBRM1-201ENST00000296302 ODF2LQ9ULJ1 636 aa12.14□□□□□ -0.47
PBRM1-201ENST00000296302 MROH5Q6ZUA9 1318 aa12.14□□□□□ -0.47
PBRM1-201ENST00000296302 HIBADHP31937 336 aaKnown RBP12.14□□□□□ -0.47
PBRM1-201ENST00000296302 MAGEA9P43362 315 aa12.14□□□□□ -0.47
PBRM1-201ENST00000296302 RBL2Q08999 1139 aa12.14□□□□□ -0.47
PBRM1-201ENST00000296302 CASP8Q14790 479 aa12.14□□□□□ -0.47
PBRM1-201ENST00000296302 BLIDQ8IZY5 108 aa12.14□□□□□ -0.47
PBRM1-201ENST00000296302 ENOX1Q8TC92 643 aaKnown RBP12.14□□□□□ -0.47
PBRM1-201ENST00000296302 KIFC2Q96AC6 838 aa12.14□□□□□ -0.47
PBRM1-201ENST00000296302 MRPL44Q9H9J2 332 aaKnown RBP12.14□□□□□ -0.47
PBRM1-201ENST00000296302 GCNT3O95395 438 aa12.14□□□□□ -0.47
PBRM1-201ENST00000296302 ALS2CLQ60I27 953 aa12.14□□□□□ -0.47
PBRM1-201ENST00000296302 ZNF354CQ86Y25 554 aa12.14□□□□□ -0.47
PBRM1-201ENST00000296302 FNBP4Q8N3X1 1017 aaPredicted RBP12.14□□□□□ -0.47
PBRM1-201ENST00000296302 INTS9Q9NV88 658 aaKnown RBP12.14□□□□□ -0.47
PBRM1-201ENST00000296302 STK10O94804 968 aaKnown RBP12.13□□□□□ -0.47
PBRM1-201ENST00000296302 ADAMTS2O95450 1211 aa12.13□□□□□ -0.47
PBRM1-201ENST00000296302 PHBP35232 272 aa12.13□□□□□ -0.47
PBRM1-201ENST00000296302 SNX16P57768 344 aa12.13□□□□□ -0.47
PBRM1-201ENST00000296302 PPARAQ07869 468 aa12.13□□□□□ -0.47
PBRM1-201ENST00000296302 GALNT17Q6IS24 598 aa12.13□□□□□ -0.47
PBRM1-201ENST00000296302 DCUN1D2Q6PH85 259 aa12.13□□□□□ -0.47
PBRM1-201ENST00000296302 MYCT1Q8N699 235 aa12.13□□□□□ -0.47
PBRM1-201ENST00000296302 LINC00301Q8NCQ3 95 aa12.13□□□□□ -0.47
PBRM1-201ENST00000296302 SLC52A2Q9HAB3 445 aa12.13□□□□□ -0.47
PBRM1-201ENST00000296302 CARMIL3Q8ND23 1372 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms