RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 ZMYND10O75800 440 aa17.77■□□□□ 0.44
SSRP1-202ENST00000293880 TNNI1P19237 187 aa17.77■□□□□ 0.44
SSRP1-202ENST00000293880 SERPINB6P35237 376 aa17.77■□□□□ 0.44
SSRP1-202ENST00000293880 BZW2Q9Y6E2 419 aaKnown RBP17.77■□□□□ 0.44
SSRP1-202ENST00000293880 CFBP00751 764 aa17.77■□□□□ 0.43
SSRP1-202ENST00000293880 PPFIA1Q13136 1202 aa17.77■□□□□ 0.43
SSRP1-202ENST00000293880 TMEM87BQ96K49 555 aa17.77■□□□□ 0.43
SSRP1-202ENST00000293880 C19orf44Q9H6X5 657 aa17.77■□□□□ 0.43
SSRP1-202ENST00000293880 ATF7P17544 494 aaPredicted RBP17.76■□□□□ 0.43
SSRP1-202ENST00000293880 PUM3Q15397 648 aaKnown RBP17.76■□□□□ 0.43
SSRP1-202ENST00000293880 PDE11AQ9HCR9 933 aa17.76■□□□□ 0.43
SSRP1-202ENST00000293880 ST7Q9NRC1 585 aa17.76■□□□□ 0.43
SSRP1-202ENST00000293880 AMFRQ9UKV5 643 aa17.76■□□□□ 0.43
SSRP1-202ENST00000293880 PPP2R2CQ9Y2T4 447 aa17.76■□□□□ 0.43
SSRP1-202ENST00000293880 RAPGEF6Q8TEU7 1601 aa17.76■□□□□ 0.43
SSRP1-202ENST00000293880 ZNF532Q9HCE3 1301 aa17.76■□□□□ 0.43
SSRP1-202ENST00000293880 PFKFB1P16118 471 aa17.76■□□□□ 0.43
SSRP1-202ENST00000293880 ZAP70P43403 619 aa17.76■□□□□ 0.43
SSRP1-202ENST00000293880 CLIC6Q96NY7 704 aa17.76■□□□□ 0.43
SSRP1-202ENST00000293880 IL2RBP14784 551 aa17.76■□□□□ 0.43
SSRP1-202ENST00000293880 HIBADHP31937 336 aaKnown RBP17.76■□□□□ 0.43
SSRP1-202ENST00000293880 EYA1Q99502 592 aa17.76■□□□□ 0.43
SSRP1-202ENST00000293880 IFNB1P01574 187 aa17.76■□□□□ 0.43
SSRP1-202ENST00000293880 SYCP2Q9BX26 1530 aa17.76■□□□□ 0.43
SSRP1-202ENST00000293880 GPATCH8Q9UKJ3 1502 aaKnown RBP17.76■□□□□ 0.43
SSRP1-202ENST00000293880 GOLGA8KD6RF30 607 aa17.76■□□□□ 0.43
SSRP1-202ENST00000293880 BCRP11274 1271 aa17.76■□□□□ 0.43
SSRP1-202ENST00000293880 ZNF445P59923 1031 aa17.75■□□□□ 0.43
SSRP1-202ENST00000293880 PICK1Q9NRD5 415 aa17.75■□□□□ 0.43
SSRP1-202ENST00000293880 TMOD4Q9NZQ9 345 aa17.75■□□□□ 0.43
SSRP1-202ENST00000293880 KAT6BQ8WYB5 2073 aa17.75■□□□□ 0.43
SSRP1-202ENST00000293880 NONOQ15233 471 aaKnown RBP eCLIP17.75■□□□□ 0.43
SSRP1-202ENST00000293880 NOP9Q86U38 636 aaKnown RBP17.75■□□□□ 0.43
SSRP1-202ENST00000293880 KDRP35968 1356 aa17.75■□□□□ 0.43
SSRP1-202ENST00000293880 TROVE2P10155 538 aaKnown RBP eCLIP17.75■□□□□ 0.43
SSRP1-202ENST00000293880 PKP1Q13835 747 aa17.75■□□□□ 0.43
SSRP1-202ENST00000293880 RBBP5Q15291 538 aaKnown RBP17.75■□□□□ 0.43
SSRP1-202ENST00000293880 TBC1D10BQ4KMP7 808 aaPredicted RBP17.75■□□□□ 0.43
SSRP1-202ENST00000293880 SPDL1Q96EA4 605 aa17.75■□□□□ 0.43
SSRP1-202ENST00000293880 E7EWF7 191 aa17.75■□□□□ 0.43
SSRP1-202ENST00000293880 ZNF518AQ6AHZ1 1483 aa17.75■□□□□ 0.43
SSRP1-202ENST00000293880 B4DLN1 442 aa17.75■□□□□ 0.43
SSRP1-202ENST00000293880 ENC1O14682 589 aa17.75■□□□□ 0.43
SSRP1-202ENST00000293880 SLC12A2P55011 1212 aa17.75■□□□□ 0.43
SSRP1-202ENST00000293880 RAB20Q9NX57 234 aa17.75■□□□□ 0.43
SSRP1-202ENST00000293880 KDM2BQ8NHM5 1336 aa17.75■□□□□ 0.43
SSRP1-202ENST00000293880 FLOT1O75955 427 aa17.74■□□□□ 0.43
SSRP1-202ENST00000293880 POLE2P56282 527 aa17.74■□□□□ 0.43
SSRP1-202ENST00000293880 LLPHQ9BRT6 129 aaKnown RBP17.74■□□□□ 0.43
SSRP1-202ENST00000293880 USP19O94966 1318 aa17.74■□□□□ 0.43
SSRP1-202ENST00000293880 KCNA6P17658 529 aa17.74■□□□□ 0.43
SSRP1-202ENST00000293880 FOXD4Q12950 439 aaPredicted RBP17.74■□□□□ 0.43
SSRP1-202ENST00000293880 PPP4R1Q8TF05 950 aa17.74■□□□□ 0.43
SSRP1-202ENST00000293880 DDX17Q92841 729 aaKnown RBP17.74■□□□□ 0.43
SSRP1-202ENST00000293880 NOD1Q9Y239 953 aa17.74■□□□□ 0.43
SSRP1-202ENST00000293880 STAM2O75886 525 aa17.74■□□□□ 0.43
SSRP1-202ENST00000293880 SLC24A3Q9HC58 644 aa17.74■□□□□ 0.43
SSRP1-202ENST00000293880 SMYD2Q9NRG4 433 aa17.74■□□□□ 0.43
SSRP1-202ENST00000293880 BTG4Q9NY30 223 aa17.74■□□□□ 0.43
SSRP1-202ENST00000293880 PARD3Q8TEW0 1356 aa17.74■□□□□ 0.43
SSRP1-202ENST00000293880 RASSF2P50749 326 aa17.74■□□□□ 0.43
SSRP1-202ENST00000293880 GPBP1Q86WP2 473 aa17.74■□□□□ 0.43
SSRP1-202ENST00000293880 PDZD8Q8NEN9 1154 aa17.74■□□□□ 0.43
SSRP1-202ENST00000293880 ARHGEF10LQ9HCE6 1279 aa17.74■□□□□ 0.43
SSRP1-202ENST00000293880 RNF40O75150 1001 aa17.74■□□□□ 0.43
SSRP1-202ENST00000293880 ABL1P00519 1130 aa17.74■□□□□ 0.43
SSRP1-202ENST00000293880 CCT5P48643 541 aa17.74■□□□□ 0.43
SSRP1-202ENST00000293880 C2orf54Q08AI8 447 aa17.74■□□□□ 0.43
SSRP1-202ENST00000293880 TTC6Q86TZ1 520 aa17.74■□□□□ 0.43
SSRP1-202ENST00000293880 EEF2KMTQ96G04 330 aa17.74■□□□□ 0.43
SSRP1-202ENST00000293880 RAB17Q9H0T7 212 aa17.74■□□□□ 0.43
SSRP1-202ENST00000293880 HOXC9P31274 260 aa17.73■□□□□ 0.43
SSRP1-202ENST00000293880 RPS6KA2Q15349 733 aa17.73■□□□□ 0.43
SSRP1-202ENST00000293880 GPT2Q8TD30 523 aa17.73■□□□□ 0.43
SSRP1-202ENST00000293880 PYCARDQ9ULZ3 195 aa17.73■□□□□ 0.43
SSRP1-202ENST00000293880 THAP12O43422 761 aa17.73■□□□□ 0.43
SSRP1-202ENST00000293880 PPP1R2P41236 205 aa17.73■□□□□ 0.43
SSRP1-202ENST00000293880 POLR2FP61218 127 aaKnown RBP17.73■□□□□ 0.43
SSRP1-202ENST00000293880 RCN2Q14257 317 aa17.73■□□□□ 0.43
SSRP1-202ENST00000293880 C4orf50Q6ZRC1 276 aa17.73■□□□□ 0.43
SSRP1-202ENST00000293880 SRGAP1Q7Z6B7 1085 aa17.73■□□□□ 0.43
SSRP1-202ENST00000293880 SPATA5Q8NB90 893 aa17.73■□□□□ 0.43
SSRP1-202ENST00000293880 GPKOWQ92917 476 aaPredicted RBP eCLIP17.73■□□□□ 0.43
SSRP1-202ENST00000293880 KLHL14Q9P2G3 628 aa17.73■□□□□ 0.43
SSRP1-202ENST00000293880 NRBP1Q9UHY1 535 aa17.73■□□□□ 0.43
SSRP1-202ENST00000293880 TRAPPC8Q9Y2L5 1435 aa17.73■□□□□ 0.43
SSRP1-202ENST00000293880 A0A087WWV3 80 aa17.73■□□□□ 0.43
SSRP1-202ENST00000293880 SPDYE16A6NNV3 312 aaPredicted RBP17.73■□□□□ 0.43
SSRP1-202ENST00000293880 SNCBQ16143 134 aa17.73■□□□□ 0.43
SSRP1-202ENST00000293880 SPDYE2Q495Y8 402 aa17.73■□□□□ 0.43
SSRP1-202ENST00000293880 SESTD1Q86VW0 696 aa17.73■□□□□ 0.43
SSRP1-202ENST00000293880 METTL13Q8N6R0 699 aa17.73■□□□□ 0.43
SSRP1-202ENST00000293880 CLIC4Q9Y696 253 aa17.73■□□□□ 0.43
SSRP1-202ENST00000293880 LGSNQ5TDP6 509 aa17.72■□□□□ 0.43
SSRP1-202ENST00000293880 ZC4H2Q9NQZ6 224 aa17.72■□□□□ 0.43
SSRP1-202ENST00000293880 MAPKBP1O60336 1514 aa17.72■□□□□ 0.43
SSRP1-202ENST00000293880 INPP1P49441 399 aa17.72■□□□□ 0.43
SSRP1-202ENST00000293880 POMGNT1Q8WZA1 660 aa17.72■□□□□ 0.43
SSRP1-202ENST00000293880 ZMYM3Q14202 1370 aa17.72■□□□□ 0.43
SSRP1-202ENST00000293880 TTBK2Q6IQ55 1244 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms