RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 ADAM21Q9UKJ8 722 aa14.96□□□□□ -0.01
SLC28A1-201ENST00000286749 COL1A1P02452 1464 aaPredicted RBP14.96□□□□□ -0.01
SLC28A1-201ENST00000286749 A0A1B0GUL6 1792 aa14.96□□□□□ -0.02
SLC28A1-201ENST00000286749 WTIPA6NIX2 430 aaPredicted RBP14.96□□□□□ -0.02
SLC28A1-201ENST00000286749 KCNJ18B7U540 433 aa14.96□□□□□ -0.02
SLC28A1-201ENST00000286749 MCM7P33993 719 aa14.96□□□□□ -0.02
SLC28A1-201ENST00000286749 KCNJ12Q14500 433 aa14.96□□□□□ -0.02
SLC28A1-201ENST00000286749 IL17AQ16552 155 aa14.96□□□□□ -0.02
SLC28A1-201ENST00000286749 CYP26C1Q6V0L0 522 aa14.96□□□□□ -0.02
SLC28A1-201ENST00000286749 SUGCTQ9HAC7 445 aa14.96□□□□□ -0.02
SLC28A1-201ENST00000286749 ABCB6Q9NP58 842 aa14.96□□□□□ -0.02
SLC28A1-201ENST00000286749 MAPK8IP1Q9UQF2 711 aa14.96□□□□□ -0.02
SLC28A1-201ENST00000286749 TAF1P21675 1872 aa14.95□□□□□ -0.02
SLC28A1-201ENST00000286749 LRRC10BA6NIK2 292 aa14.95□□□□□ -0.02
SLC28A1-201ENST00000286749 ADAMTS3O15072 1205 aa14.95□□□□□ -0.02
SLC28A1-201ENST00000286749 GTPBP6O43824 516 aaPredicted RBP14.95□□□□□ -0.02
SLC28A1-201ENST00000286749 CALM1P0DP23 149 aa14.95□□□□□ -0.02
SLC28A1-201ENST00000286749 CALM2P0DP24 149 aa14.95□□□□□ -0.02
SLC28A1-201ENST00000286749 CALM3P0DP25 149 aa14.95□□□□□ -0.02
SLC28A1-201ENST00000286749 TCP11X2Q5H9J9 407 aa14.95□□□□□ -0.02
SLC28A1-201ENST00000286749 HDXQ7Z353 690 aa14.95□□□□□ -0.02
SLC28A1-201ENST00000286749 SRBD1Q8N5C6 995 aaKnown RBP14.95□□□□□ -0.02
SLC28A1-201ENST00000286749 A0A0U1RQG5 324 aaPredicted RBP14.95□□□□□ -0.02
SLC28A1-201ENST00000286749 ERLIN1O75477 346 aa14.95□□□□□ -0.02
SLC28A1-201ENST00000286749 EIF5P55010 431 aaKnown RBP14.95□□□□□ -0.02
SLC28A1-201ENST00000286749 EVX2Q03828 476 aa14.95□□□□□ -0.02
SLC28A1-201ENST00000286749 SPAG1Q07617 926 aa14.95□□□□□ -0.02
SLC28A1-201ENST00000286749 ANKRD20A12PQ8NF67 263 aa14.95□□□□□ -0.02
SLC28A1-201ENST00000286749 GDAQ9Y2T3 454 aa14.95□□□□□ -0.02
SLC28A1-201ENST00000286749 LAMB2P55268 1798 aa14.94□□□□□ -0.02
SLC28A1-201ENST00000286749 COL22A1Q8NFW1 1626 aaPredicted RBP14.94□□□□□ -0.02
SLC28A1-201ENST00000286749 CTAGE15A4D2H0 777 aa14.94□□□□□ -0.02
SLC28A1-201ENST00000286749 TULP2O00295 520 aa14.94□□□□□ -0.02
SLC28A1-201ENST00000286749 NMT2O60551 498 aa14.94□□□□□ -0.02
SLC28A1-201ENST00000286749 DDAH1O94760 285 aa14.94□□□□□ -0.02
SLC28A1-201ENST00000286749 CTAGE8P0CG41 777 aa14.94□□□□□ -0.02
SLC28A1-201ENST00000286749 KRT9P35527 623 aa14.94□□□□□ -0.02
SLC28A1-201ENST00000286749 LMAN1P49257 510 aa14.94□□□□□ -0.02
SLC28A1-201ENST00000286749 NLRP5P59047 1200 aa14.94□□□□□ -0.02
SLC28A1-201ENST00000286749 VSNL1P62760 191 aa14.94□□□□□ -0.02
SLC28A1-201ENST00000286749 WWC2Q6AWC2 1192 aa14.94□□□□□ -0.02
SLC28A1-201ENST00000286749 CTAGE6Q86UF2 777 aa14.94□□□□□ -0.02
SLC28A1-201ENST00000286749 CTAGE4Q8IX94 777 aa14.94□□□□□ -0.02
SLC28A1-201ENST00000286749 EXOC4Q96A65 974 aa14.94□□□□□ -0.02
SLC28A1-201ENST00000286749 DISP2A7MBM2 1401 aa14.94□□□□□ -0.02
SLC28A1-201ENST00000286749 VEGFAP15692 232 aaPredicted RBP14.94□□□□□ -0.02
SLC28A1-201ENST00000286749 WHAMMP3Q1A5X7 153 aa14.94□□□□□ -0.02
SLC28A1-201ENST00000286749 ZNF658Q5TYW1 1059 aaPredicted RBP14.94□□□□□ -0.02
SLC28A1-201ENST00000286749 CTCFLQ8NI51 663 aaPredicted RBP14.94□□□□□ -0.02
SLC28A1-201ENST00000286749 L1RE1Q9UN81 338 aa14.94□□□□□ -0.02
SLC28A1-201ENST00000286749 ZNF804BA4D1E1 1349 aa14.93□□□□□ -0.02
SLC28A1-201ENST00000286749 DOT1LQ8TEK3 1739 aa14.93□□□□□ -0.02
SLC28A1-201ENST00000286749 RPN1P04843 607 aaKnown RBP14.93□□□□□ -0.02
SLC28A1-201ENST00000286749 CAPN2P17655 700 aa14.93□□□□□ -0.02
SLC28A1-201ENST00000286749 UBXN1Q04323 297 aa14.93□□□□□ -0.02
SLC28A1-201ENST00000286749 RAD51AP2Q09MP3 1159 aa14.93□□□□□ -0.02
SLC28A1-201ENST00000286749 TRIM14Q14142 442 aa14.93□□□□□ -0.02
SLC28A1-201ENST00000286749 MUM1L1Q5H9M0 696 aa14.93□□□□□ -0.02
SLC28A1-201ENST00000286749 CTR9Q6PD62 1173 aa14.93□□□□□ -0.02
SLC28A1-201ENST00000286749 NOA1Q8NC60 698 aaKnown RBP14.93□□□□□ -0.02
SLC28A1-201ENST00000286749 CHP1Q99653 195 aa14.93□□□□□ -0.02
SLC28A1-201ENST00000286749 BRIP1Q9BX63 1249 aa14.93□□□□□ -0.02
SLC28A1-201ENST00000286749 VPS18Q9P253 973 aa14.93□□□□□ -0.02
SLC28A1-201ENST00000286749 USP17L12C9JPN9 530 aa14.93□□□□□ -0.02
SLC28A1-201ENST00000286749 USP17L21D6R901 530 aa14.93□□□□□ -0.02
SLC28A1-201ENST00000286749 NTSR2O95665 410 aa14.93□□□□□ -0.02
SLC28A1-201ENST00000286749 SCG2P13521 617 aa14.93□□□□□ -0.02
SLC28A1-201ENST00000286749 PRCPP42785 496 aa14.93□□□□□ -0.02
SLC28A1-201ENST00000286749 ZSCAN26Q16670 478 aa14.93□□□□□ -0.02
SLC28A1-201ENST00000286749 NCAPH2Q6IBW4 605 aa14.93□□□□□ -0.02
SLC28A1-201ENST00000286749 INTS5Q6P9B9 1019 aaKnown RBP14.93□□□□□ -0.02
SLC28A1-201ENST00000286749 TMEM51Q9NW97 253 aa14.93□□□□□ -0.02
SLC28A1-201ENST00000286749 MYO1AQ9UBC5 1043 aa14.93□□□□□ -0.02
SLC28A1-201ENST00000286749 TRIM10Q9UDY6 481 aa14.93□□□□□ -0.02
SLC28A1-201ENST00000286749 NIP7Q9Y221 180 aaKnown RBP eCLIP14.93□□□□□ -0.02
SLC28A1-201ENST00000286749 A0A0G2JS52 829 aa14.92□□□□□ -0.02
SLC28A1-201ENST00000286749 N4BP1O75113 896 aaKnown RBP14.92□□□□□ -0.02
SLC28A1-201ENST00000286749 TUBB4BP68371 445 aa14.92□□□□□ -0.02
SLC28A1-201ENST00000286749 PIP4K2BP78356 416 aa14.92□□□□□ -0.02
SLC28A1-201ENST00000286749 FAM47AQ5JRC9 791 aa14.92□□□□□ -0.02
SLC28A1-201ENST00000286749 ZNF384Q8TF68 577 aa14.92□□□□□ -0.02
SLC28A1-201ENST00000286749 GNL3LQ9NVN8 582 aaKnown RBP14.92□□□□□ -0.02
SLC28A1-201ENST00000286749 RMND1Q9NWS8 449 aa14.92□□□□□ -0.02
SLC28A1-201ENST00000286749 MYO6Q9UM54 1294 aa14.92□□□□□ -0.02
SLC28A1-201ENST00000286749 REXO2Q9Y3B8 237 aaKnown RBP14.92□□□□□ -0.02
SLC28A1-201ENST00000286749 TRIM49BA6NDI0 452 aa14.92□□□□□ -0.02
SLC28A1-201ENST00000286749 CAMTA2O94983 1202 aa14.92□□□□□ -0.02
SLC28A1-201ENST00000286749 TRAPPC10P48553 1259 aa14.92□□□□□ -0.02
SLC28A1-201ENST00000286749 AMPD2Q01433 879 aa14.92□□□□□ -0.02
SLC28A1-201ENST00000286749 PARP10Q53GL7 1025 aa14.92□□□□□ -0.02
SLC28A1-201ENST00000286749 PYM1Q9BRP8 204 aaKnown RBP14.92□□□□□ -0.02
SLC28A1-201ENST00000286749 CCDC87Q9NVE4 849 aa14.92□□□□□ -0.02
SLC28A1-201ENST00000286749 PSD3Q9NYI0 1048 aa14.92□□□□□ -0.02
SLC28A1-201ENST00000286749 GUCA1BQ9UMX6 200 aa14.92□□□□□ -0.02
SLC28A1-201ENST00000286749 LAMB1P07942 1786 aa14.92□□□□□ -0.02
SLC28A1-201ENST00000286749 EIF3JO75822 258 aaKnown RBP14.91□□□□□ -0.02
SLC28A1-201ENST00000286749 FGRP09769 529 aa14.91□□□□□ -0.02
SLC28A1-201ENST00000286749 CRKLP46109 303 aaKnown RBP14.91□□□□□ -0.02
SLC28A1-201ENST00000286749 IRF2BP1Q8IU81 584 aa14.91□□□□□ -0.02
SLC28A1-201ENST00000286749 EPN1Q9Y6I3 576 aaPredicted RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms