RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 NCAPH2Q6IBW4 605 aa9.56□□□□□ -0.88
NIPBL-201ENST00000282516 CCDC197Q8NCU1 140 aa9.56□□□□□ -0.88
NIPBL-201ENST00000282516 NT5C3AQ9H0P0 336 aa9.56□□□□□ -0.88
NIPBL-201ENST00000282516 EMILIN1Q9Y6C2 1016 aa9.56□□□□□ -0.88
NIPBL-201ENST00000282516 CAPN9O14815 690 aa9.56□□□□□ -0.88
NIPBL-201ENST00000282516 GPC4O75487 556 aa9.56□□□□□ -0.88
NIPBL-201ENST00000282516 NLRP12P59046 1061 aa9.56□□□□□ -0.88
NIPBL-201ENST00000282516 C4orf50Q6ZRC1 276 aa9.56□□□□□ -0.88
NIPBL-201ENST00000282516 HERC4Q5GLZ8 1057 aaPredicted RBP9.56□□□□□ -0.88
NIPBL-201ENST00000282516 ANO3Q9BYT9 981 aa9.56□□□□□ -0.88
NIPBL-201ENST00000282516 TMEM87BQ96K49 555 aa9.56□□□□□ -0.88
NIPBL-201ENST00000282516 HELLSQ9NRZ9 838 aa9.56□□□□□ -0.88
NIPBL-201ENST00000282516 RTEL1Q9NZ71 1219 aa9.56□□□□□ -0.88
NIPBL-201ENST00000282516 EFCAB14O75071 495 aa9.55□□□□□ -0.88
NIPBL-201ENST00000282516 XPAP23025 273 aaPredicted RBP9.55□□□□□ -0.88
NIPBL-201ENST00000282516 NOP14P78316 857 aaKnown RBP9.55□□□□□ -0.88
NIPBL-201ENST00000282516 TYW1BQ6NUM6 668 aa9.55□□□□□ -0.88
NIPBL-201ENST00000282516 ANKRD35Q8N283 1001 aa9.55□□□□□ -0.88
NIPBL-201ENST00000282516 TTC25Q96NG3 672 aa9.55□□□□□ -0.88
NIPBL-201ENST00000282516 GPCPD1Q9NPB8 672 aa9.55□□□□□ -0.88
NIPBL-201ENST00000282516 SLC5A4Q9NY91 659 aa9.55□□□□□ -0.88
NIPBL-201ENST00000282516 PDE6CP51160 858 aa9.55□□□□□ -0.88
NIPBL-201ENST00000282516 PIK3AP1Q6ZUJ8 805 aa9.55□□□□□ -0.88
NIPBL-201ENST00000282516 C2CD5Q86YS7 1000 aa9.55□□□□□ -0.88
NIPBL-201ENST00000282516 MIGA1Q8NAN2 632 aa9.55□□□□□ -0.88
NIPBL-201ENST00000282516 CARD6Q9BX69 1037 aa9.55□□□□□ -0.88
NIPBL-201ENST00000282516 F8W8V4 182 aa9.55□□□□□ -0.88
NIPBL-201ENST00000282516 HADHQ16836 314 aaKnown RBP9.55□□□□□ -0.88
NIPBL-201ENST00000282516 RBM17Q96I25 401 aaKnown RBP9.55□□□□□ -0.88
NIPBL-201ENST00000282516 ANGEL1Q9UNK9 670 aaKnown RBP9.55□□□□□ -0.88
NIPBL-201ENST00000282516 TMEM247A6NEH6 219 aa9.55□□□□□ -0.88
NIPBL-201ENST00000282516 MAP3K7O43318 606 aa9.55□□□□□ -0.88
NIPBL-201ENST00000282516 TAF11Q15544 211 aa9.55□□□□□ -0.88
NIPBL-201ENST00000282516 ANKRD44Q8N8A2 993 aa9.55□□□□□ -0.88
NIPBL-201ENST00000282516 PSMB7Q99436 277 aa9.55□□□□□ -0.88
NIPBL-201ENST00000282516 ZC3H12CQ9C0D7 883 aaKnown RBP9.55□□□□□ -0.88
NIPBL-201ENST00000282516 HYOU1Q9Y4L1 999 aa9.55□□□□□ -0.88
NIPBL-201ENST00000282516 FLOT2Q14254 428 aa9.55□□□□□ -0.88
NIPBL-201ENST00000282516 KRT80Q6KB66 452 aa9.55□□□□□ -0.88
NIPBL-201ENST00000282516 DCLK2Q8N568 766 aa9.55□□□□□ -0.88
NIPBL-201ENST00000282516 TMCO5AQ8N6Q1 288 aa9.55□□□□□ -0.88
NIPBL-201ENST00000282516 PARD3BQ8TEW8 1205 aa9.55□□□□□ -0.88
NIPBL-201ENST00000282516 ST7Q9NRC1 585 aa9.55□□□□□ -0.88
NIPBL-201ENST00000282516 COPG1Q9Y678 874 aaKnown RBP9.55□□□□□ -0.88
NIPBL-201ENST00000282516 SNAPC4Q5SXM2 1469 aa9.55□□□□□ -0.88
NIPBL-201ENST00000282516 RCN2Q14257 317 aa9.55□□□□□ -0.88
NIPBL-201ENST00000282516 SRRM1Q8IYB3 904 aaKnown RBP9.55□□□□□ -0.88
NIPBL-201ENST00000282516 SPDYE1Q8NFV5 336 aaPredicted RBP9.55□□□□□ -0.88
NIPBL-201ENST00000282516 MYO1AQ9UBC5 1043 aa9.55□□□□□ -0.88
NIPBL-201ENST00000282516 ABCC5O15440 1437 aa9.55□□□□□ -0.88
NIPBL-201ENST00000282516 WASLO00401 505 aaPredicted RBP9.55□□□□□ -0.88
NIPBL-201ENST00000282516 C16orf87Q6PH81 154 aa9.55□□□□□ -0.88
NIPBL-201ENST00000282516 KSR2Q6VAB6 950 aa9.55□□□□□ -0.88
NIPBL-201ENST00000282516 RRAGAQ7L523 313 aa9.55□□□□□ -0.88
NIPBL-201ENST00000282516 TEX11Q8IYF3 940 aa9.55□□□□□ -0.88
NIPBL-201ENST00000282516 U2AF1L4Q8WU68 220 aaKnown RBP9.55□□□□□ -0.88
NIPBL-201ENST00000282516 REXO1Q8N1G1 1221 aaKnown RBP9.55□□□□□ -0.88
NIPBL-201ENST00000282516 NME8Q8N427 588 aa9.55□□□□□ -0.88
NIPBL-201ENST00000282516 TTC1Q99614 292 aa9.55□□□□□ -0.88
NIPBL-201ENST00000282516 NIP7Q9Y221 180 aaKnown RBP eCLIP9.55□□□□□ -0.88
NIPBL-201ENST00000282516 A0A1B0GW55 424 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 ZBBXA8MT70 800 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 DUX4L2P0CJ85 424 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 DUX4L3P0CJ86 424 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 DUX4L4P0CJ87 422 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 DUX4L5P0CJ88 424 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 DUX4L6P0CJ89 424 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 DUX4L7P0CJ90 424 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 NPR1P16066 1061 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 DUX4Q9UBX2 424 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 DENND2AQ9ULE3 1009 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 A6NJR5 290 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 PCYT1AP49585 367 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 WAPLQ7Z5K2 1190 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 FBXL13Q8NEE6 735 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 KDM2BQ8NHM5 1336 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 SNX29Q8TEQ0 813 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 SLF1Q9BQI6 1058 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 SMYD2Q9NRG4 433 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 AOX1Q06278 1338 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 INHBAP08476 426 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 MYCLP12524 364 aaPredicted RBP9.54□□□□□ -0.88
NIPBL-201ENST00000282516 PPP2R5BQ15173 497 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 SCYL3Q8IZE3 742 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 TAB2Q9NYJ8 693 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 PCF11O94913 1555 aaKnown RBP9.54□□□□□ -0.88
NIPBL-201ENST00000282516 SKIP12755 728 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 STAT1P42224 750 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 SNX1Q13596 522 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 SERPINI1Q99574 410 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 WDR7Q9Y4E6 1490 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 YWHAGP61981 247 aaKnown RBP eCLIP9.54□□□□□ -0.88
NIPBL-201ENST00000282516 NBPF3Q9H094 633 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 CNOT10Q9H9A5 744 aaKnown RBP9.54□□□□□ -0.88
NIPBL-201ENST00000282516 IFT122Q9HBG6 1241 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 SAT1P21673 171 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 BEGAINQ9BUH8 593 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 TRIM55Q9BYV6 548 aa9.54□□□□□ -0.88
NIPBL-201ENST00000282516 HEXIM1O94992 359 aaKnown RBP9.54□□□□□ -0.88
NIPBL-201ENST00000282516 KLC3Q6P597 504 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms