RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 MYBL1P10243 752 aa14.36□□□□□ -0.11
HERC6-202ENST00000273960 ENOX2Q16206 610 aaKnown RBP14.36□□□□□ -0.11
HERC6-202ENST00000273960 CCDC96Q2M329 555 aa14.36□□□□□ -0.11
HERC6-202ENST00000273960 CCDC57Q2TAC2 916 aa14.36□□□□□ -0.11
HERC6-202ENST00000273960 SYNE4Q8N205 404 aa14.36□□□□□ -0.11
HERC6-202ENST00000273960 HAUS2Q9NVX0 235 aa14.36□□□□□ -0.11
HERC6-202ENST00000273960 CWC25Q9NXE8 425 aaPredicted RBP14.36□□□□□ -0.11
HERC6-202ENST00000273960 ZMYM6O95789 1325 aa14.36□□□□□ -0.11
HERC6-202ENST00000273960 ZBTB43O43298 467 aa14.36□□□□□ -0.11
HERC6-202ENST00000273960 RASSF8Q8NHQ8 419 aa14.36□□□□□ -0.11
HERC6-202ENST00000273960 HELLSQ9NRZ9 838 aa14.36□□□□□ -0.11
HERC6-202ENST00000273960 RANBP6O60518 1105 aaKnown RBP14.36□□□□□ -0.11
HERC6-202ENST00000273960 KLK7P49862 253 aa14.36□□□□□ -0.11
HERC6-202ENST00000273960 SATB1Q01826 763 aa14.36□□□□□ -0.11
HERC6-202ENST00000273960 TMEM67Q5HYA8 995 aa14.36□□□□□ -0.11
HERC6-202ENST00000273960 KIF6Q6ZMV9 814 aa14.36□□□□□ -0.11
HERC6-202ENST00000273960 TRAPPC11Q7Z392 1133 aa14.36□□□□□ -0.11
HERC6-202ENST00000273960 MIEF2Q96C03 454 aa14.36□□□□□ -0.11
HERC6-202ENST00000273960 NAA15Q9BXJ9 866 aaKnown RBP14.36□□□□□ -0.11
HERC6-202ENST00000273960 IDH1O75874 414 aaKnown RBP14.35□□□□□ -0.11
HERC6-202ENST00000273960 UPP2O95045 317 aa14.35□□□□□ -0.11
HERC6-202ENST00000273960 TOB1P50616 345 aaPredicted RBP14.35□□□□□ -0.11
HERC6-202ENST00000273960 ZNF174Q15697 407 aa14.35□□□□□ -0.11
HERC6-202ENST00000273960 CARD10Q9BWT7 1032 aa14.35□□□□□ -0.11
HERC6-202ENST00000273960 AGXT2Q9BYV1 514 aa14.35□□□□□ -0.11
HERC6-202ENST00000273960 CHUKO15111 745 aa14.35□□□□□ -0.11
HERC6-202ENST00000273960 SCARF1Q14162 830 aa14.35□□□□□ -0.11
HERC6-202ENST00000273960 NOSTRINQ8IVI9 506 aa14.35□□□□□ -0.11
HERC6-202ENST00000273960 CCDC13Q8IYE1 715 aa14.35□□□□□ -0.11
HERC6-202ENST00000273960 MLXIPQ9HAP2 919 aa14.35□□□□□ -0.11
HERC6-202ENST00000273960 BAIAP2L1Q9UHR4 511 aa14.35□□□□□ -0.11
HERC6-202ENST00000273960 NBPF26B4DH59 902 aa14.35□□□□□ -0.11
HERC6-202ENST00000273960 PRDM1O75626 825 aa14.35□□□□□ -0.11
HERC6-202ENST00000273960 SSRP1Q08945 709 aaKnown RBP14.35□□□□□ -0.11
HERC6-202ENST00000273960 ODF2Q5BJF6 829 aa14.35□□□□□ -0.11
HERC6-202ENST00000273960 NBPF14Q5TI25 921 aa14.35□□□□□ -0.11
HERC6-202ENST00000273960 NAA35Q5VZE5 725 aa14.35□□□□□ -0.11
HERC6-202ENST00000273960 NBPF10Q6P3W6 841 aaKnown RBP14.35□□□□□ -0.11
HERC6-202ENST00000273960 NFRKBQ6P4R8 1299 aa14.35□□□□□ -0.11
HERC6-202ENST00000273960 B4GALNT4Q76KP1 1039 aa14.35□□□□□ -0.11
HERC6-202ENST00000273960 NBPF15Q8N660 670 aa14.35□□□□□ -0.11
HERC6-202ENST00000273960 SLC40A1Q9NP59 571 aa14.35□□□□□ -0.11
HERC6-202ENST00000273960 LUC7L2Q9Y383 392 aaKnown RBP14.35□□□□□ -0.11
HERC6-202ENST00000273960 IFIT3O14879 490 aaKnown RBP14.34□□□□□ -0.11
HERC6-202ENST00000273960 COPB1P53618 953 aaKnown RBP14.34□□□□□ -0.11
HERC6-202ENST00000273960 KCNQ4P56696 695 aa14.34□□□□□ -0.11
HERC6-202ENST00000273960 APTXQ7Z2E3 356 aaKnown RBP14.34□□□□□ -0.11
HERC6-202ENST00000273960 HELBQ8NG08 1087 aaPredicted RBP14.34□□□□□ -0.11
HERC6-202ENST00000273960 MS4A14Q96JA4 679 aa14.34□□□□□ -0.11
HERC6-202ENST00000273960 ZIM3Q96PE6 472 aa14.34□□□□□ -0.11
HERC6-202ENST00000273960 VIPAS39Q9H9C1 493 aa14.34□□□□□ -0.11
HERC6-202ENST00000273960 NFU1Q9UMS0 254 aa14.34□□□□□ -0.11
HERC6-202ENST00000273960 GDAQ9Y2T3 454 aa14.34□□□□□ -0.11
HERC6-202ENST00000273960 MEGF6O75095 1541 aa14.34□□□□□ -0.11
HERC6-202ENST00000273960 CCDC189A1A4V9 331 aa14.34□□□□□ -0.11
HERC6-202ENST00000273960 HGSO14964 777 aaPredicted RBP14.34□□□□□ -0.11
HERC6-202ENST00000273960 CCDC121Q6ZUS5 278 aa14.34□□□□□ -0.11
HERC6-202ENST00000273960 MB21D2Q8IYB1 491 aaPredicted RBP14.34□□□□□ -0.11
HERC6-202ENST00000273960 THOC1Q96FV9 657 aaKnown RBP14.34□□□□□ -0.11
HERC6-202ENST00000273960 FAM184BQ9ULE4 1060 aa14.34□□□□□ -0.11
HERC6-202ENST00000273960 ANGEL1Q9UNK9 670 aaKnown RBP14.34□□□□□ -0.11
HERC6-202ENST00000273960 NALCNQ8IZF0 1738 aa14.34□□□□□ -0.11
HERC6-202ENST00000273960 PCDH11XQ9BZA7 1347 aa14.34□□□□□ -0.11
HERC6-202ENST00000273960 PCDH11YQ9BZA8 1340 aa14.34□□□□□ -0.11
HERC6-202ENST00000273960 GPAA1O43292 621 aa14.34□□□□□ -0.11
HERC6-202ENST00000273960 KIF1CO43896 1103 aaKnown RBP14.34□□□□□ -0.11
HERC6-202ENST00000273960 TRIM21P19474 475 aaKnown RBP14.34□□□□□ -0.11
HERC6-202ENST00000273960 LSP1P33241 339 aa14.34□□□□□ -0.11
HERC6-202ENST00000273960 ZAP70P43403 619 aa14.34□□□□□ -0.11
HERC6-202ENST00000273960 HERVK_113P62684 666 aa14.34□□□□□ -0.11
HERC6-202ENST00000273960 CTDSPL2Q05D32 466 aa14.34□□□□□ -0.11
HERC6-202ENST00000273960 SPRED3Q2MJR0 410 aa14.34□□□□□ -0.11
HERC6-202ENST00000273960 APOA5Q6Q788 366 aa14.34□□□□□ -0.11
HERC6-202ENST00000273960 BICDL1Q6ZP65 573 aa14.34□□□□□ -0.11
HERC6-202ENST00000273960 TBC1D10CQ8IV04 446 aa14.34□□□□□ -0.11
HERC6-202ENST00000273960 OR2W6PQ8NHA6 318 aa14.34□□□□□ -0.11
HERC6-202ENST00000273960 RNF217Q8TC41 542 aa14.34□□□□□ -0.11
HERC6-202ENST00000273960 UBAC1Q9BSL1 405 aa14.34□□□□□ -0.11
HERC6-202ENST00000273960 AGPAT5Q9NUQ2 364 aa14.34□□□□□ -0.11
HERC6-202ENST00000273960 CEP126Q9P2H0 1117 aa14.34□□□□□ -0.11
HERC6-202ENST00000273960 KCNJ18B7U540 433 aa14.33□□□□□ -0.12
HERC6-202ENST00000273960 OPA1O60313 960 aa14.33□□□□□ -0.12
HERC6-202ENST00000273960 FAM153BP0C7A2 387 aa14.33□□□□□ -0.12
HERC6-202ENST00000273960 GCKP35557 465 aa14.33□□□□□ -0.12
HERC6-202ENST00000273960 KCNJ12Q14500 433 aa14.33□□□□□ -0.12
HERC6-202ENST00000273960 TRADDQ15628 312 aa14.33□□□□□ -0.12
HERC6-202ENST00000273960 FAM153CQ494X1 144 aa14.33□□□□□ -0.12
HERC6-202ENST00000273960 CFAP58Q5T655 872 aa14.33□□□□□ -0.12
HERC6-202ENST00000273960 ZNF473Q8WTR7 871 aaKnown RBP14.33□□□□□ -0.12
HERC6-202ENST00000273960 SYMPKQ92797 1274 aaKnown RBP14.33□□□□□ -0.12
HERC6-202ENST00000273960 CNNM1Q9NRU3 951 aa14.33□□□□□ -0.12
HERC6-202ENST00000273960 FAM153AQ9UHL3 310 aa14.33□□□□□ -0.12
HERC6-202ENST00000273960 FBXO2Q9UK22 296 aaPredicted RBP14.33□□□□□ -0.12
HERC6-202ENST00000273960 SH3TC1Q8TE82 1336 aa14.33□□□□□ -0.12
HERC6-202ENST00000273960 MOCS3O95396 460 aa14.33□□□□□ -0.12
HERC6-202ENST00000273960 MCM3P25205 808 aa14.33□□□□□ -0.12
HERC6-202ENST00000273960 TTF1Q15361 905 aaPredicted RBP14.33□□□□□ -0.12
HERC6-202ENST00000273960 COPRSQ9NQ92 184 aa14.33□□□□□ -0.12
HERC6-202ENST00000273960 LRWD1Q9UFC0 647 aa14.33□□□□□ -0.12
HERC6-202ENST00000273960 DDX20Q9UHI6 824 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms