RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 RTL9Q8NET4 1388 aa31.02■■■□□ 2.56
CBX4-201ENST00000269397 PIP4K2BP78356 416 aa31.02■■■□□ 2.56
CBX4-201ENST00000269397 IL17AQ16552 155 aa31.02■■■□□ 2.56
CBX4-201ENST00000269397 IQUBQ8NA54 791 aa31.02■■■□□ 2.56
CBX4-201ENST00000269397 CWC15Q9P013 229 aaKnown RBP31.02■■■□□ 2.56
CBX4-201ENST00000269397 MYH2Q9UKX2 1941 aa31.02■■■□□ 2.56
CBX4-201ENST00000269397 PRPF3O43395 683 aaKnown RBP31.01■■■□□ 2.56
CBX4-201ENST00000269397 VEGFAP15692 232 aaPredicted RBP31.01■■■□□ 2.56
CBX4-201ENST00000269397 TUBB2AQ13885 445 aa31.01■■■□□ 2.56
CBX4-201ENST00000269397 LEKR1Q6ZMV7 388 aa31.01■■■□□ 2.56
CBX4-201ENST00000269397 CATIPQ7Z7H3 387 aa31.01■■■□□ 2.56
CBX4-201ENST00000269397 TUBB2BQ9BVA1 445 aa31.01■■■□□ 2.56
CBX4-201ENST00000269397 TRIM49BA6NDI0 452 aa31.01■■■□□ 2.55
CBX4-201ENST00000269397 AMPD2Q01433 879 aa31.01■■■□□ 2.55
CBX4-201ENST00000269397 EVX2Q03828 476 aa31.01■■■□□ 2.55
CBX4-201ENST00000269397 SHANK3Q9BYB0 1731 aa31.01■■■□□ 2.55
CBX4-201ENST00000269397 LRRC10BA6NIK2 292 aa31.01■■■□□ 2.55
CBX4-201ENST00000269397 SRGAP2O75044 1071 aa31.01■■■□□ 2.55
CBX4-201ENST00000269397 RCAN1P53805 252 aa31.01■■■□□ 2.55
CBX4-201ENST00000269397 PDXDC2PQ6P474 469 aa31.01■■■□□ 2.55
CBX4-201ENST00000269397 TNFRSF25Q93038 417 aa31.01■■■□□ 2.55
CBX4-201ENST00000269397 RWDD2AQ9UIY3 292 aa31.01■■■□□ 2.55
CBX4-201ENST00000269397 WTIPA6NIX2 430 aaPredicted RBP31■■■□□ 2.55
CBX4-201ENST00000269397 ATP2C1P98194 919 aaPredicted RBP31■■■□□ 2.55
CBX4-201ENST00000269397 BRMS1Q9HCU9 246 aa31■■■□□ 2.55
CBX4-201ENST00000269397 EPN1Q9Y6I3 576 aaPredicted RBP31■■■□□ 2.55
CBX4-201ENST00000269397 HSP90B2PQ58FF3 399 aa30.99■■■□□ 2.55
CBX4-201ENST00000269397 SUSD4Q5VX71 490 aa30.99■■■□□ 2.55
CBX4-201ENST00000269397 NDUFA10O95299 355 aa30.99■■■□□ 2.55
CBX4-201ENST00000269397 DYNLL1P63167 89 aaKnown RBP30.99■■■□□ 2.55
CBX4-201ENST00000269397 GDAP1L1Q96MZ0 367 aa30.99■■■□□ 2.55
CBX4-201ENST00000269397 DOCK2Q92608 1830 aa30.98■■■□□ 2.55
CBX4-201ENST00000269397 MAGEB6P1A0A0J9YX57 407 aa30.98■■■□□ 2.55
CBX4-201ENST00000269397 TTC26A0AVF1 554 aa30.98■■■□□ 2.55
CBX4-201ENST00000269397 NMT2O60551 498 aa30.98■■■□□ 2.55
CBX4-201ENST00000269397 PRCPP42785 496 aa30.98■■■□□ 2.55
CBX4-201ENST00000269397 EEF2KMTQ96G04 330 aa30.98■■■□□ 2.55
CBX4-201ENST00000269397 MTA3Q9BTC8 594 aa30.98■■■□□ 2.55
CBX4-201ENST00000269397 SLC20A2Q08357 652 aa30.98■■■□□ 2.55
CBX4-201ENST00000269397 TROAPQ12815 778 aa30.98■■■□□ 2.55
CBX4-201ENST00000269397 ANKRD20A12PQ8NF67 263 aa30.98■■■□□ 2.55
CBX4-201ENST00000269397 CAPZA3Q96KX2 299 aa30.98■■■□□ 2.55
CBX4-201ENST00000269397 RRP15Q9Y3B9 282 aaKnown RBP30.98■■■□□ 2.55
CBX4-201ENST00000269397 TSPYL1Q9H0U9 437 aa30.97■■■□□ 2.55
CBX4-201ENST00000269397 BMP15O95972 392 aa30.97■■■□□ 2.55
CBX4-201ENST00000269397 SRLQ86TD4 932 aa30.97■■■□□ 2.55
CBX4-201ENST00000269397 ZMYND10O75800 440 aa30.96■■■□□ 2.55
CBX4-201ENST00000269397 BRINP3Q76B58 766 aa30.96■■■□□ 2.55
CBX4-201ENST00000269397 SRBD1Q8N5C6 995 aaKnown RBP30.96■■■□□ 2.55
CBX4-201ENST00000269397 RASSF4Q9H2L5 321 aa30.96■■■□□ 2.55
CBX4-201ENST00000269397 RPN1P04843 607 aaKnown RBP30.96■■■□□ 2.55
CBX4-201ENST00000269397 BCL9LQ86UU0 1499 aa30.95■■■□□ 2.55
CBX4-201ENST00000269397 GTPBP6O43824 516 aaPredicted RBP30.95■■■□□ 2.55
CBX4-201ENST00000269397 ATP1A1P05023 1023 aaKnown RBP30.95■■■□□ 2.55
CBX4-201ENST00000269397 NLRP5P59047 1200 aa30.95■■■□□ 2.55
CBX4-201ENST00000269397 IRF2BP1Q8IU81 584 aa30.95■■■□□ 2.55
CBX4-201ENST00000269397 ZNF34Q8IZ26 560 aa30.95■■■□□ 2.55
CBX4-201ENST00000269397 MMS19Q96T76 1030 aa30.95■■■□□ 2.55
CBX4-201ENST00000269397 GBP3Q9H0R5 595 aa30.95■■■□□ 2.55
CBX4-201ENST00000269397 PLEKHA4Q9H4M7 779 aa30.95■■■□□ 2.55
CBX4-201ENST00000269397 MYO1AQ9UBC5 1043 aa30.95■■■□□ 2.55
CBX4-201ENST00000269397 TNNT3P45378 269 aaPredicted RBP30.95■■■□□ 2.54
CBX4-201ENST00000269397 PMS1P54277 932 aaKnown RBP30.95■■■□□ 2.54
CBX4-201ENST00000269397 SPAG1Q07617 926 aa30.95■■■□□ 2.54
CBX4-201ENST00000269397 ZNF658Q5TYW1 1059 aaPredicted RBP30.95■■■□□ 2.54
CBX4-201ENST00000269397 BCORQ6W2J9 1755 aa30.95■■■□□ 2.54
CBX4-201ENST00000269397 NUP98P52948 1817 aa30.94■■■□□ 2.54
CBX4-201ENST00000269397 SLIT2O94813 1529 aa30.94■■■□□ 2.54
CBX4-201ENST00000269397 PARP1P09874 1014 aaKnown RBP30.94■■■□□ 2.54
CBX4-201ENST00000269397 CCDC148Q8NFR7 591 aa30.94■■■□□ 2.54
CBX4-201ENST00000269397 FAM204AQ9H8W3 233 aa30.94■■■□□ 2.54
CBX4-201ENST00000269397 PPP2R5BQ15173 497 aa30.94■■■□□ 2.54
CBX4-201ENST00000269397 TMTC3Q6ZXV5 915 aa30.94■■■□□ 2.54
CBX4-201ENST00000269397 GYG1P46976 350 aa30.93■■■□□ 2.54
CBX4-201ENST00000269397 TUBB4BP68371 445 aa30.93■■■□□ 2.54
CBX4-201ENST00000269397 IQCA1Q86XH1 822 aa30.93■■■□□ 2.54
CBX4-201ENST00000269397 PLIN2Q99541 437 aa30.93■■■□□ 2.54
CBX4-201ENST00000269397 HINFPQ9BQA5 517 aa30.93■■■□□ 2.54
CBX4-201ENST00000269397 TRAPPC11Q7Z392 1133 aa30.93■■■□□ 2.54
CBX4-201ENST00000269397 FAM71BQ8TC56 605 aa30.93■■■□□ 2.54
CBX4-201ENST00000269397 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.93■■■□□ 2.54
CBX4-201ENST00000269397 CNTNAP5Q8WYK1 1306 aa30.93■■■□□ 2.54
CBX4-201ENST00000269397 BAZ2AQ9UIF9 1905 aaKnown RBP30.93■■■□□ 2.54
CBX4-201ENST00000269397 TRIM14Q14142 442 aa30.92■■■□□ 2.54
CBX4-201ENST00000269397 CCDC122Q5T0U0 273 aa30.92■■■□□ 2.54
CBX4-201ENST00000269397 HERVK_113P62684 666 aa30.92■■■□□ 2.54
CBX4-201ENST00000269397 CHRNDQ07001 517 aa30.92■■■□□ 2.54
CBX4-201ENST00000269397 OR8K1Q8NGG5 319 aa30.92■■■□□ 2.54
CBX4-201ENST00000269397 RSPH14Q9UHP6 348 aa30.92■■■□□ 2.54
CBX4-201ENST00000269397 ANAPC4Q9UJX5 808 aa30.92■■■□□ 2.54
CBX4-201ENST00000269397 ANKRD65E5RJM6 399 aa30.91■■■□□ 2.54
CBX4-201ENST00000269397 FAM47AQ5JRC9 791 aa30.91■■■□□ 2.54
CBX4-201ENST00000269397 RIN2Q8WYP3 895 aaPredicted RBP30.91■■■□□ 2.54
CBX4-201ENST00000269397 RBM28Q9NW13 759 aaKnown RBP30.91■■■□□ 2.54
CBX4-201ENST00000269397 LUC7L2Q9Y383 392 aaKnown RBP30.91■■■□□ 2.54
CBX4-201ENST00000269397 SKIDA1Q1XH10 827 aa30.91■■■□□ 2.54
CBX4-201ENST00000269397 GSPT2Q8IYD1 628 aaKnown RBP30.91■■■□□ 2.54
CBX4-201ENST00000269397 PP2D1A8MPX8 630 aa30.91■■■□□ 2.54
CBX4-201ENST00000269397 IGHMBP2P38935 993 aaKnown RBP30.91■■■□□ 2.54
CBX4-201ENST00000269397 WDR93Q6P2C0 686 aa30.91■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms