RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 AFG3L2Q9Y4W6 797 aa19.22■□□□□ 0.67
NOTCH3-201ENST00000263388 PPP2R5DQ14738 602 aa19.21■□□□□ 0.67
NOTCH3-201ENST00000263388 SLFN12Q8IYM2 578 aa19.21■□□□□ 0.67
NOTCH3-201ENST00000263388 ZNF274Q96GC6 653 aaPredicted RBP19.21■□□□□ 0.67
NOTCH3-201ENST00000263388 GADD45BO75293 160 aaPredicted RBP19.21■□□□□ 0.67
NOTCH3-201ENST00000263388 KRT24Q2M2I5 525 aa19.21■□□□□ 0.67
NOTCH3-201ENST00000263388 FAM135BQ49AJ0 1406 aa19.21■□□□□ 0.67
NOTCH3-201ENST00000263388 E7EWF7 191 aa19.21■□□□□ 0.67
NOTCH3-201ENST00000263388 SLC8A1P32418 973 aa19.21■□□□□ 0.67
NOTCH3-201ENST00000263388 USH1GQ495M9 461 aa19.21■□□□□ 0.67
NOTCH3-201ENST00000263388 PALM2Q8IXS6 379 aa19.21■□□□□ 0.67
NOTCH3-201ENST00000263388 C19orf44Q9H6X5 657 aa19.21■□□□□ 0.67
NOTCH3-201ENST00000263388 PHLDB3Q6NSJ2 640 aa19.21■□□□□ 0.67
NOTCH3-201ENST00000263388 SND1Q7KZF4 910 aaKnown RBP eCLIP19.21■□□□□ 0.67
NOTCH3-201ENST00000263388 RUNDC3BQ96NL0 473 aa19.21■□□□□ 0.67
NOTCH3-201ENST00000263388 CDCA7Q9BWT1 371 aaPredicted RBP19.21■□□□□ 0.67
NOTCH3-201ENST00000263388 TESK2Q96S53 571 aa19.21■□□□□ 0.67
NOTCH3-201ENST00000263388 MGARPQ8TDB4 240 aa19.21■□□□□ 0.66
NOTCH3-201ENST00000263388 ZNF532Q9HCE3 1301 aa19.2■□□□□ 0.66
NOTCH3-201ENST00000263388 MYCLP12524 364 aaPredicted RBP19.2■□□□□ 0.66
NOTCH3-201ENST00000263388 TNNI1P19237 187 aa19.2■□□□□ 0.66
NOTCH3-201ENST00000263388 TBC1D22AQ8WUA7 517 aa19.2■□□□□ 0.66
NOTCH3-201ENST00000263388 CLASP1Q7Z460 1538 aa19.2■□□□□ 0.66
NOTCH3-201ENST00000263388 ADKP55263 362 aaKnown RBP19.2■□□□□ 0.66
NOTCH3-201ENST00000263388 HGSO14964 777 aaPredicted RBP19.2■□□□□ 0.66
NOTCH3-201ENST00000263388 HIP1RO75146 1068 aa19.2■□□□□ 0.66
NOTCH3-201ENST00000263388 LRRC8AQ8IWT6 810 aa19.2■□□□□ 0.66
NOTCH3-201ENST00000263388 KRT81Q14533 505 aa19.2■□□□□ 0.66
NOTCH3-201ENST00000263388 KRT40Q6A162 431 aa19.2■□□□□ 0.66
NOTCH3-201ENST00000263388 LSM14BQ9BX40 385 aaKnown RBP19.2■□□□□ 0.66
NOTCH3-201ENST00000263388 MIS12Q9H081 205 aa19.2■□□□□ 0.66
NOTCH3-201ENST00000263388 ARPP21Q9UBL0 812 aaPredicted RBP19.2■□□□□ 0.66
NOTCH3-201ENST00000263388 NOD1Q9Y239 953 aa19.2■□□□□ 0.66
NOTCH3-201ENST00000263388 STK38LQ9Y2H1 464 aa19.2■□□□□ 0.66
NOTCH3-201ENST00000263388 MAEAQ7L5Y9 396 aa19.2■□□□□ 0.66
NOTCH3-201ENST00000263388 TNNQ9UQP3 1299 aa19.2■□□□□ 0.66
NOTCH3-201ENST00000263388 TRPC6Q9Y210 931 aa19.2■□□□□ 0.66
NOTCH3-201ENST00000263388 EIF6P56537 245 aaKnown RBP19.19■□□□□ 0.66
NOTCH3-201ENST00000263388 PLCD3Q8N3E9 789 aa19.19■□□□□ 0.66
NOTCH3-201ENST00000263388 PCDHB13Q9Y5F0 798 aa19.19■□□□□ 0.66
NOTCH3-201ENST00000263388 ZNF608Q9ULD9 1512 aaPredicted RBP19.19■□□□□ 0.66
NOTCH3-201ENST00000263388 TRIM37O94972 964 aa19.19■□□□□ 0.66
NOTCH3-201ENST00000263388 GALNT17Q6IS24 598 aa19.19■□□□□ 0.66
NOTCH3-201ENST00000263388 GOLGA8QA0A0J9YX86 632 aa19.19■□□□□ 0.66
NOTCH3-201ENST00000263388 GOLGA8OA6NCC3 632 aa19.19■□□□□ 0.66
NOTCH3-201ENST00000263388 GOLGA8NF8WBI6 632 aa19.19■□□□□ 0.66
NOTCH3-201ENST00000263388 GAS7O60861 476 aa19.19■□□□□ 0.66
NOTCH3-201ENST00000263388 CCDC13Q8IYE1 715 aa19.19■□□□□ 0.66
NOTCH3-201ENST00000263388 TTLL3Q9Y4R7 772 aa19.19■□□□□ 0.66
NOTCH3-201ENST00000263388 MYO1AQ9UBC5 1043 aa19.19■□□□□ 0.66
NOTCH3-201ENST00000263388 TRIM35Q9UPQ4 493 aa19.19■□□□□ 0.66
NOTCH3-201ENST00000263388 MAP3K19Q56UN5 1328 aa19.19■□□□□ 0.66
NOTCH3-201ENST00000263388 DYMQ7RTS9 669 aa19.19■□□□□ 0.66
NOTCH3-201ENST00000263388 VPS54Q9P1Q0 977 aa19.19■□□□□ 0.66
NOTCH3-201ENST00000263388 CD2APQ9Y5K6 639 aa19.19■□□□□ 0.66
NOTCH3-201ENST00000263388 THAP12O43422 761 aa19.19■□□□□ 0.66
NOTCH3-201ENST00000263388 INPP1P49441 399 aa19.19■□□□□ 0.66
NOTCH3-201ENST00000263388 VPS37BQ9H9H4 285 aa19.19■□□□□ 0.66
NOTCH3-201ENST00000263388 H7C1D1 291 aa19.18■□□□□ 0.66
NOTCH3-201ENST00000263388 KCNK3O14649 394 aa19.18■□□□□ 0.66
NOTCH3-201ENST00000263388 COG7P83436 770 aa19.18■□□□□ 0.66
NOTCH3-201ENST00000263388 LONRF3Q496Y0 759 aa19.18■□□□□ 0.66
NOTCH3-201ENST00000263388 DBNDD2Q9BQY9 259 aa19.18■□□□□ 0.66
NOTCH3-201ENST00000263388 ZMYM6O95789 1325 aa19.18■□□□□ 0.66
NOTCH3-201ENST00000263388 KMT5BQ4FZB7 885 aa19.18■□□□□ 0.66
NOTCH3-201ENST00000263388 FAM71BQ8TC56 605 aa19.18■□□□□ 0.66
NOTCH3-201ENST00000263388 HYOU1Q9Y4L1 999 aa19.18■□□□□ 0.66
NOTCH3-201ENST00000263388 MED23Q9ULK4 1368 aa19.18■□□□□ 0.66
NOTCH3-201ENST00000263388 NOSTRINQ8IVI9 506 aa19.18■□□□□ 0.66
NOTCH3-201ENST00000263388 TCHHQ07283 1943 aa19.18■□□□□ 0.66
NOTCH3-201ENST00000263388 IVNS1ABPQ9Y6Y0 642 aa19.18■□□□□ 0.66
NOTCH3-201ENST00000263388 PTPRKQ15262 1439 aa19.18■□□□□ 0.66
NOTCH3-201ENST00000263388 BAIAP2L1Q9UHR4 511 aa19.18■□□□□ 0.66
NOTCH3-201ENST00000263388 PSDA5PKW4 1024 aaPredicted RBP19.18■□□□□ 0.66
NOTCH3-201ENST00000263388 CAPS2Q9BXY5 557 aa19.18■□□□□ 0.66
NOTCH3-201ENST00000263388 M0QZ92 97 aa19.18■□□□□ 0.66
NOTCH3-201ENST00000263388 C17orf53Q8N3J3 647 aaPredicted RBP19.18■□□□□ 0.66
NOTCH3-201ENST00000263388 CROCC2H7BZ55 1655 aa19.17■□□□□ 0.66
NOTCH3-201ENST00000263388 KRT3P12035 628 aa19.17■□□□□ 0.66
NOTCH3-201ENST00000263388 RAD51AP2Q09MP3 1159 aa19.17■□□□□ 0.66
NOTCH3-201ENST00000263388 BZW2Q9Y6E2 419 aaKnown RBP19.17■□□□□ 0.66
NOTCH3-201ENST00000263388 DDX39AO00148 427 aaKnown RBP19.17■□□□□ 0.66
NOTCH3-201ENST00000263388 WDR46O15213 610 aaKnown RBP19.17■□□□□ 0.66
NOTCH3-201ENST00000263388 GUCY2FP51841 1108 aa19.17■□□□□ 0.66
NOTCH3-201ENST00000263388 CARD14Q9BXL6 1004 aa19.17■□□□□ 0.66
NOTCH3-201ENST00000263388 KRT19P08727 400 aa19.17■□□□□ 0.66
NOTCH3-201ENST00000263388 CTDSPL2Q05D32 466 aa19.17■□□□□ 0.66
NOTCH3-201ENST00000263388 PLCB4Q15147 1175 aa19.17■□□□□ 0.66
NOTCH3-201ENST00000263388 MYOCDQ8IZQ8 938 aa19.17■□□□□ 0.66
NOTCH3-201ENST00000263388 MAGEF1Q9HAY2 307 aa19.17■□□□□ 0.66
NOTCH3-201ENST00000263388 KIAA0232Q92628 1395 aa19.17■□□□□ 0.66
NOTCH3-201ENST00000263388 ZBED4O75132 1171 aa19.17■□□□□ 0.66
NOTCH3-201ENST00000263388 ATP5JP18859 108 aa19.17■□□□□ 0.66
NOTCH3-201ENST00000263388 ME3Q16798 604 aa19.17■□□□□ 0.66
NOTCH3-201ENST00000263388 SLC52A2Q9HAB3 445 aa19.17■□□□□ 0.66
NOTCH3-201ENST00000263388 MAP2P11137 1827 aaKnown RBP19.17■□□□□ 0.66
NOTCH3-201ENST00000263388 TCP1P17987 556 aaKnown RBP19.17■□□□□ 0.66
NOTCH3-201ENST00000263388 RRAGDQ9NQL2 400 aaPredicted RBP19.17■□□□□ 0.66
NOTCH3-201ENST00000263388 DMP1Q13316 513 aaPredicted RBP19.16■□□□□ 0.66
NOTCH3-201ENST00000263388 PPP2R5CQ13362 524 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms