RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 RGS2P41220 211 aa11.23□□□□□ -0.61
TTC39A-201ENST00000262675 USP14P54578 494 aa11.23□□□□□ -0.61
TTC39A-201ENST00000262675 HERVK_113P62684 666 aa11.23□□□□□ -0.61
TTC39A-201ENST00000262675 CCDC84Q86UT8 332 aaPredicted RBP11.23□□□□□ -0.61
TTC39A-201ENST00000262675 FAM227BQ96M60 508 aa11.23□□□□□ -0.61
TTC39A-201ENST00000262675 AATFQ9NY61 560 aaKnown RBP eCLIP11.23□□□□□ -0.61
TTC39A-201ENST00000262675 FLT1P17948 1338 aa11.23□□□□□ -0.61
TTC39A-201ENST00000262675 GADD45BO75293 160 aaPredicted RBP11.22□□□□□ -0.61
TTC39A-201ENST00000262675 KRT85P78386 507 aa11.22□□□□□ -0.61
TTC39A-201ENST00000262675 ME3Q16798 604 aa11.22□□□□□ -0.61
TTC39A-201ENST00000262675 LARP1BQ659C4 914 aaKnown RBP11.22□□□□□ -0.61
TTC39A-201ENST00000262675 PI16Q6UXB8 463 aa11.22□□□□□ -0.61
TTC39A-201ENST00000262675 TGFBRAP1Q8WUH2 860 aa11.22□□□□□ -0.61
TTC39A-201ENST00000262675 C12orf42Q96LP6 360 aa11.22□□□□□ -0.61
TTC39A-201ENST00000262675 HAUS7Q99871 368 aa11.22□□□□□ -0.61
TTC39A-201ENST00000262675 GDF15Q99988 308 aa11.22□□□□□ -0.61
TTC39A-201ENST00000262675 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.22□□□□□ -0.61
TTC39A-201ENST00000262675 ZBTB21Q9ULJ3 1066 aa11.22□□□□□ -0.61
TTC39A-201ENST00000262675 CNPY2Q9Y2B0 182 aa11.22□□□□□ -0.61
TTC39A-201ENST00000262675 CENPFP49454 3210 aa11.21□□□□□ -0.61
TTC39A-201ENST00000262675 A0A0D9SFI3 127 aa11.21□□□□□ -0.61
TTC39A-201ENST00000262675 P2RX7Q99572 595 aaKnown RBP11.21□□□□□ -0.61
TTC39A-201ENST00000262675 APBA2Q99767 749 aa11.21□□□□□ -0.61
TTC39A-201ENST00000262675 SCAND2PQ9GZW5 306 aaPredicted RBP11.21□□□□□ -0.61
TTC39A-201ENST00000262675 EHD4Q9H223 541 aa11.21□□□□□ -0.61
TTC39A-201ENST00000262675 RABGAP1Q9Y3P9 1069 aa11.21□□□□□ -0.61
TTC39A-201ENST00000262675 MYH1P12882 1939 aa11.21□□□□□ -0.62
TTC39A-201ENST00000262675 ERVK-9P63128 1117 aa11.21□□□□□ -0.62
TTC39A-201ENST00000262675 ERVK-24P63145 666 aa11.21□□□□□ -0.62
TTC39A-201ENST00000262675 LRIT3Q3SXY7 679 aa11.21□□□□□ -0.62
TTC39A-201ENST00000262675 MCMDC2Q4G0Z9 681 aa11.21□□□□□ -0.62
TTC39A-201ENST00000262675 PLEKHH3Q7Z736 793 aa11.21□□□□□ -0.62
TTC39A-201ENST00000262675 C7orf61Q8IZ16 206 aa11.21□□□□□ -0.62
TTC39A-201ENST00000262675 TRIB2Q92519 343 aa11.21□□□□□ -0.62
TTC39A-201ENST00000262675 TPCN1Q9ULQ1 816 aa11.21□□□□□ -0.62
TTC39A-201ENST00000262675 MKI67P46013 3256 aaKnown RBP11.21□□□□□ -0.62
TTC39A-201ENST00000262675 USP17L15C9J2P7 530 aa11.2□□□□□ -0.62
TTC39A-201ENST00000262675 USP17L13C9JLJ4 530 aa11.2□□□□□ -0.62
TTC39A-201ENST00000262675 USP17L11C9JVI0 530 aa11.2□□□□□ -0.62
TTC39A-201ENST00000262675 USP17L18D6R9N7 530 aa11.2□□□□□ -0.62
TTC39A-201ENST00000262675 USP17L22D6RA61 530 aa11.2□□□□□ -0.62
TTC39A-201ENST00000262675 USP17L17D6RBQ6 530 aa11.2□□□□□ -0.62
TTC39A-201ENST00000262675 USP17L19D6RCP7 530 aa11.2□□□□□ -0.62
TTC39A-201ENST00000262675 USP17L20D6RJB6 530 aa11.2□□□□□ -0.62
TTC39A-201ENST00000262675 MSCO60682 206 aa11.2□□□□□ -0.62
TTC39A-201ENST00000262675 LARGE1O95461 756 aa11.2□□□□□ -0.62
TTC39A-201ENST00000262675 TPM3P06753 285 aa11.2□□□□□ -0.62
TTC39A-201ENST00000262675 SLURP2P0DP57 97 aa11.2□□□□□ -0.62
TTC39A-201ENST00000262675 PRKAR2AP13861 404 aaKnown RBP11.2□□□□□ -0.62
TTC39A-201ENST00000262675 CYP2B6P20813 491 aa11.2□□□□□ -0.62
TTC39A-201ENST00000262675 USP17L24Q0WX57 530 aa11.2□□□□□ -0.62
TTC39A-201ENST00000262675 RRP1BQ14684 758 aaKnown RBP11.2□□□□□ -0.62
TTC39A-201ENST00000262675 LRRFIP1Q32MZ4 808 aaKnown RBP11.2□□□□□ -0.62
TTC39A-201ENST00000262675 TTC6Q86TZ1 520 aa11.2□□□□□ -0.62
TTC39A-201ENST00000262675 MAPKAPK5Q8IW41 473 aa11.2□□□□□ -0.62
TTC39A-201ENST00000262675 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.2□□□□□ -0.62
TTC39A-201ENST00000262675 USP6NLQ92738 828 aa11.2□□□□□ -0.62
TTC39A-201ENST00000262675 CHAMP1Q96JM3 812 aa11.2□□□□□ -0.62
TTC39A-201ENST00000262675 HELLSQ9NRZ9 838 aa11.2□□□□□ -0.62
TTC39A-201ENST00000262675 TLR7Q9NYK1 1049 aaKnown RBP11.2□□□□□ -0.62
TTC39A-201ENST00000262675 MORN1Q5T089 497 aa11.2□□□□□ -0.62
TTC39A-201ENST00000262675 MFSD14CQ5VZR4 134 aa11.2□□□□□ -0.62
TTC39A-201ENST00000262675 LBX2Q6XYB7 198 aa11.2□□□□□ -0.62
TTC39A-201ENST00000262675 SLC17A8Q8NDX2 589 aa11.2□□□□□ -0.62
TTC39A-201ENST00000262675 DIS3LQ8TF46 1054 aaKnown RBP11.2□□□□□ -0.62
TTC39A-201ENST00000262675 LLPHQ9BRT6 129 aaKnown RBP11.2□□□□□ -0.62
TTC39A-201ENST00000262675 GDPD2Q9HCC8 539 aa11.2□□□□□ -0.62
TTC39A-201ENST00000262675 DBNLQ9UJU6 430 aaKnown RBP11.2□□□□□ -0.62
TTC39A-201ENST00000262675 KIF3AQ9Y496 699 aa11.2□□□□□ -0.62
TTC39A-201ENST00000262675 SLC15A5A6NIM6 579 aa11.19□□□□□ -0.62
TTC39A-201ENST00000262675 TATDN1Q6P1N9 297 aa11.19□□□□□ -0.62
TTC39A-201ENST00000262675 GPR142Q7Z601 462 aa11.19□□□□□ -0.62
TTC39A-201ENST00000262675 TDHQ8IZJ6 230 aa11.19□□□□□ -0.62
TTC39A-201ENST00000262675 KBTBD3Q8NAB2 608 aa11.19□□□□□ -0.62
TTC39A-201ENST00000262675 NEK1Q96PY6 1258 aa11.19□□□□□ -0.62
TTC39A-201ENST00000262675 DBNDD2Q9BQY9 259 aa11.19□□□□□ -0.62
TTC39A-201ENST00000262675 CABP5Q9NP86 173 aa11.19□□□□□ -0.62
TTC39A-201ENST00000262675 RBPJLQ9UBG7 517 aa11.19□□□□□ -0.62
TTC39A-201ENST00000262675 SERPINB13Q9UIV8 391 aa11.19□□□□□ -0.62
TTC39A-201ENST00000262675 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.19□□□□□ -0.62
TTC39A-201ENST00000262675 FIBPO43427 364 aa11.18□□□□□ -0.62
TTC39A-201ENST00000262675 CPA1P15085 419 aa11.18□□□□□ -0.62
TTC39A-201ENST00000262675 CYP7A1P22680 504 aa11.18□□□□□ -0.62
TTC39A-201ENST00000262675 USP5P45974 858 aa11.18□□□□□ -0.62
TTC39A-201ENST00000262675 DNM1Q05193 864 aaKnown RBP11.18□□□□□ -0.62
TTC39A-201ENST00000262675 MAP3K12Q12852 859 aa11.18□□□□□ -0.62
TTC39A-201ENST00000262675 MAP2K5Q13163 448 aa11.18□□□□□ -0.62
TTC39A-201ENST00000262675 FEZ1Q99689 392 aa11.18□□□□□ -0.62
TTC39A-201ENST00000262675 DSCC1Q9BVC3 393 aa11.18□□□□□ -0.62
TTC39A-201ENST00000262675 KIAA1683Q9H0B3 1180 aa11.18□□□□□ -0.62
TTC39A-201ENST00000262675 ZSCAN16Q9H4T2 348 aaPredicted RBP11.18□□□□□ -0.62
TTC39A-201ENST00000262675 DNAJC18Q9H819 358 aa11.18□□□□□ -0.62
TTC39A-201ENST00000262675 VPS37CA5D8V6 355 aaPredicted RBP11.18□□□□□ -0.62
TTC39A-201ENST00000262675 PTMAP06454 111 aaKnown RBP11.18□□□□□ -0.62
TTC39A-201ENST00000262675 CCDC192P0DO97 292 aa11.18□□□□□ -0.62
TTC39A-201ENST00000262675 COL6A1P12109 1028 aa11.18□□□□□ -0.62
TTC39A-201ENST00000262675 MNX1P50219 401 aaPredicted RBP11.18□□□□□ -0.62
TTC39A-201ENST00000262675 CACNB2Q08289 660 aaPredicted RBP11.18□□□□□ -0.62
TTC39A-201ENST00000262675 ST3GAL1Q11201 340 aa11.18□□□□□ -0.62
TTC39A-201ENST00000262675 TTF1Q15361 905 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms