RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 ALS2CR12Q96Q35 445 aa14.36□□□□□ -0.11
TMEM260-201ENST00000261556 CRNKL1Q9BZJ0 848 aaKnown RBP14.36□□□□□ -0.11
TMEM260-201ENST00000261556 NCOA5Q9HCD5 579 aaKnown RBP14.36□□□□□ -0.11
TMEM260-201ENST00000261556 SCOCQ9UIL1 159 aa14.36□□□□□ -0.11
TMEM260-201ENST00000261556 PTPDC1A2A3K4 754 aa14.36□□□□□ -0.11
TMEM260-201ENST00000261556 A1BGP04217 495 aa14.36□□□□□ -0.11
TMEM260-201ENST00000261556 TRIM35Q9UPQ4 493 aa14.36□□□□□ -0.11
TMEM260-201ENST00000261556 BZW2Q9Y6E2 419 aaKnown RBP14.36□□□□□ -0.11
TMEM260-201ENST00000261556 KRT14P02533 472 aa14.36□□□□□ -0.11
TMEM260-201ENST00000261556 DYNC1I2Q13409 638 aaKnown RBP14.36□□□□□ -0.11
TMEM260-201ENST00000261556 NAA16Q6N069 864 aaPredicted RBP14.36□□□□□ -0.11
TMEM260-201ENST00000261556 CABP5Q9NP86 173 aa14.36□□□□□ -0.11
TMEM260-201ENST00000261556 ERBB3P21860 1342 aa14.36□□□□□ -0.11
TMEM260-201ENST00000261556 KLF18A0A0U1RQI7 1052 aa14.35□□□□□ -0.11
TMEM260-201ENST00000261556 PPP1R37O75864 691 aa14.35□□□□□ -0.11
TMEM260-201ENST00000261556 HLA-DOAP06340 250 aa14.35□□□□□ -0.11
TMEM260-201ENST00000261556 METAP2P50579 478 aaKnown RBP eCLIP14.35□□□□□ -0.11
TMEM260-201ENST00000261556 SEPT7Q16181 437 aaKnown RBP14.35□□□□□ -0.11
TMEM260-201ENST00000261556 SH2D4BQ5SQS7 431 aa14.35□□□□□ -0.11
TMEM260-201ENST00000261556 PROCA1Q8NCQ7 364 aaPredicted RBP14.35□□□□□ -0.11
TMEM260-201ENST00000261556 HMG20BQ9P0W2 317 aa14.35□□□□□ -0.11
TMEM260-201ENST00000261556 VPS41P49754 854 aa14.35□□□□□ -0.11
TMEM260-201ENST00000261556 COG7P83436 770 aa14.35□□□□□ -0.11
TMEM260-201ENST00000261556 MAP7Q14244 749 aa14.35□□□□□ -0.11
TMEM260-201ENST00000261556 SLC26A6Q9BXS9 759 aa14.35□□□□□ -0.11
TMEM260-201ENST00000261556 DLGAP2Q9P1A6 1054 aa14.35□□□□□ -0.11
TMEM260-201ENST00000261556 PCDHA7Q9UN72 937 aa14.35□□□□□ -0.11
TMEM260-201ENST00000261556 GNPATO15228 680 aa14.35□□□□□ -0.11
TMEM260-201ENST00000261556 TACC1O75410 805 aa14.35□□□□□ -0.11
TMEM260-201ENST00000261556 PYGBP11216 843 aa14.35□□□□□ -0.11
TMEM260-201ENST00000261556 FAM47EQ6ZV65 393 aa14.35□□□□□ -0.11
TMEM260-201ENST00000261556 GOLPH3LQ9H4A5 285 aa14.35□□□□□ -0.11
TMEM260-201ENST00000261556 HOMER3Q9NSC5 361 aa14.35□□□□□ -0.11
TMEM260-201ENST00000261556 ZFATQ9P243 1243 aa14.35□□□□□ -0.11
TMEM260-201ENST00000261556 PCDH11XQ9BZA7 1347 aa14.35□□□□□ -0.11
TMEM260-201ENST00000261556 PCDH11YQ9BZA8 1340 aa14.35□□□□□ -0.11
TMEM260-201ENST00000261556 PTH1RQ03431 593 aa14.35□□□□□ -0.11
TMEM260-201ENST00000261556 SEPT6Q14141 434 aa14.35□□□□□ -0.11
TMEM260-201ENST00000261556 SLMAPQ14BN4 828 aa14.35□□□□□ -0.11
TMEM260-201ENST00000261556 FUKQ8N0W3 1084 aa14.35□□□□□ -0.11
TMEM260-201ENST00000261556 MGARPQ8TDB4 240 aa14.35□□□□□ -0.11
TMEM260-201ENST00000261556 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.35□□□□□ -0.11
TMEM260-201ENST00000261556 SLC4A4Q9Y6R1 1079 aa14.35□□□□□ -0.11
TMEM260-201ENST00000261556 TIMM10P62072 90 aa14.34□□□□□ -0.11
TMEM260-201ENST00000261556 VSIG1Q86XK7 387 aa14.34□□□□□ -0.11
TMEM260-201ENST00000261556 STXBP3O00186 592 aa14.34□□□□□ -0.11
TMEM260-201ENST00000261556 AKR1B10O60218 316 aa14.34□□□□□ -0.11
TMEM260-201ENST00000261556 TRIM21P19474 475 aaKnown RBP14.34□□□□□ -0.11
TMEM260-201ENST00000261556 ICA1Q05084 483 aa14.34□□□□□ -0.11
TMEM260-201ENST00000261556 MCMDC2Q4G0Z9 681 aa14.34□□□□□ -0.11
TMEM260-201ENST00000261556 TMEM154Q6P9G4 183 aa14.34□□□□□ -0.11
TMEM260-201ENST00000261556 OGFOD1Q8N543 542 aa14.34□□□□□ -0.11
TMEM260-201ENST00000261556 EPN3Q9H201 632 aa14.34□□□□□ -0.11
TMEM260-201ENST00000261556 JAG2Q9Y219 1238 aa14.34□□□□□ -0.11
TMEM260-201ENST00000261556 FSBPO95073 299 aa14.34□□□□□ -0.11
TMEM260-201ENST00000261556 CXCR5P32302 372 aa14.34□□□□□ -0.11
TMEM260-201ENST00000261556 BZW1Q7L1Q6 419 aaKnown RBP14.34□□□□□ -0.11
TMEM260-201ENST00000261556 KLHL7Q8IXQ5 586 aa14.34□□□□□ -0.11
TMEM260-201ENST00000261556 ARL8AQ96BM9 186 aa14.34□□□□□ -0.11
TMEM260-201ENST00000261556 LUC7LQ9NQ29 371 aaKnown RBP14.34□□□□□ -0.11
TMEM260-201ENST00000261556 COL17A1Q9UMD9 1497 aaPredicted RBP14.33□□□□□ -0.11
TMEM260-201ENST00000261556 CASP14P31944 242 aa14.33□□□□□ -0.11
TMEM260-201ENST00000261556 DDR1Q08345 913 aa14.33□□□□□ -0.11
TMEM260-201ENST00000261556 PAK2Q13177 524 aa14.33□□□□□ -0.11
TMEM260-201ENST00000261556 ARHGEF2Q92974 986 aaKnown RBP14.33□□□□□ -0.11
TMEM260-201ENST00000261556 RAB34Q9BZG1 259 aa14.33□□□□□ -0.11
TMEM260-201ENST00000261556 UBA5Q9GZZ9 404 aa14.33□□□□□ -0.11
TMEM260-201ENST00000261556 DNMT1P26358 1616 aaKnown RBP14.33□□□□□ -0.11
TMEM260-201ENST00000261556 TMEM2Q9UHN6 1383 aa14.33□□□□□ -0.12
TMEM260-201ENST00000261556 TMEM110-MUSTN1A8MSY1 372 aa14.33□□□□□ -0.12
TMEM260-201ENST00000261556 SUPT3HO75486 399 aa14.33□□□□□ -0.12
TMEM260-201ENST00000261556 MRPL12P52815 198 aaKnown RBP14.33□□□□□ -0.12
TMEM260-201ENST00000261556 PRPF4BQ13523 1007 aaKnown RBP14.33□□□□□ -0.12
TMEM260-201ENST00000261556 WTAPQ15007 396 aa14.33□□□□□ -0.12
TMEM260-201ENST00000261556 TDRD12Q587J7 1177 aaKnown RBP14.33□□□□□ -0.12
TMEM260-201ENST00000261556 OLFML2BQ68BL8 750 aa14.33□□□□□ -0.12
TMEM260-201ENST00000261556 MFN1Q8IWA4 741 aa14.33□□□□□ -0.12
TMEM260-201ENST00000261556 IFT20Q8IY31 132 aa14.33□□□□□ -0.12
TMEM260-201ENST00000261556 CTNND1O60716 968 aaKnown RBP14.33□□□□□ -0.12
TMEM260-201ENST00000261556 CTNNA1P35221 906 aaKnown RBP14.33□□□□□ -0.12
TMEM260-201ENST00000261556 CYLC1P35663 651 aaPredicted RBP14.33□□□□□ -0.12
TMEM260-201ENST00000261556 USP14P54578 494 aa14.33□□□□□ -0.12
TMEM260-201ENST00000261556 GUCY2DQ02846 1103 aa14.33□□□□□ -0.12
TMEM260-201ENST00000261556 KLHDC4Q8TBB5 520 aa14.33□□□□□ -0.12
TMEM260-201ENST00000261556 PHACTR1Q9C0D0 580 aa14.33□□□□□ -0.12
TMEM260-201ENST00000261556 SEPT11Q9NVA2 429 aaKnown RBP14.33□□□□□ -0.12
TMEM260-201ENST00000261556 PAG1Q9NWQ8 432 aa14.33□□□□□ -0.12
TMEM260-201ENST00000261556 PLEKHG3A1L390 1219 aa14.32□□□□□ -0.12
TMEM260-201ENST00000261556 CHL1O00533 1208 aa14.32□□□□□ -0.12
TMEM260-201ENST00000261556 TNIP1Q15025 636 aa14.32□□□□□ -0.12
TMEM260-201ENST00000261556 BEND3Q5T5X7 828 aa14.32□□□□□ -0.12
TMEM260-201ENST00000261556 RNPC3Q96LT9 517 aaKnown RBP14.32□□□□□ -0.12
TMEM260-201ENST00000261556 DDX23Q9BUQ8 820 aaKnown RBP14.32□□□□□ -0.12
TMEM260-201ENST00000261556 HELLSQ9NRZ9 838 aa14.32□□□□□ -0.12
TMEM260-201ENST00000261556 INTUQ9ULD6 942 aa14.32□□□□□ -0.12
TMEM260-201ENST00000261556 ZFYVE9O95405 1425 aa14.32□□□□□ -0.12
TMEM260-201ENST00000261556 OPHN1O60890 802 aa14.32□□□□□ -0.12
TMEM260-201ENST00000261556 TFCP2Q12800 502 aa14.32□□□□□ -0.12
TMEM260-201ENST00000261556 FAM98CQ17RN3 349 aaKnown RBP14.32□□□□□ -0.12
TMEM260-201ENST00000261556 OLFML1Q6UWY5 402 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms