RNA–Protein interactions for RNA: ENST00000257552.6

MSI1-201, Transcript of musashi RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSI1, Length 2,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1-201ENST00000257552 FAM76AQ8TAV0 307 aa16.61■□□□□ 0.25
MSI1-201ENST00000257552 CAGE1Q8TC20 777 aa16.61■□□□□ 0.25
MSI1-201ENST00000257552 SRPRBQ9Y5M8 271 aaKnown RBP16.61■□□□□ 0.25
MSI1-201ENST00000257552 COL16A1Q07092 1604 aaPredicted RBP16.61■□□□□ 0.25
MSI1-201ENST00000257552 MAP9Q49MG5 647 aa16.61■□□□□ 0.25
MSI1-201ENST00000257552 SPATA20Q8TB22 786 aa16.61■□□□□ 0.25
MSI1-201ENST00000257552 PIH1D3Q9NQM4 214 aaKnown RBP16.61■□□□□ 0.25
MSI1-201ENST00000257552 REXO2Q9Y3B8 237 aaKnown RBP16.61■□□□□ 0.25
MSI1-201ENST00000257552 EPN1Q9Y6I3 576 aaPredicted RBP16.61■□□□□ 0.25
MSI1-201ENST00000257552 FAM169AQ9Y6X4 670 aa16.61■□□□□ 0.25
MSI1-201ENST00000257552 GOLGA6CA6NDK9 693 aa16.6■□□□□ 0.25
MSI1-201ENST00000257552 PPP1R3GB7ZBB8 358 aa16.6■□□□□ 0.25
MSI1-201ENST00000257552 ZNF185O15231 689 aa16.6■□□□□ 0.25
MSI1-201ENST00000257552 GOLGA6DP0CG33 693 aa16.6■□□□□ 0.25
MSI1-201ENST00000257552 MNAT1P51948 309 aa16.6■□□□□ 0.25
MSI1-201ENST00000257552 NUP133Q8WUM0 1156 aa16.6■□□□□ 0.25
MSI1-201ENST00000257552 VIPAS39Q9H9C1 493 aa16.6■□□□□ 0.25
MSI1-201ENST00000257552 GOLGA6AQ9NYA3 693 aa16.6■□□□□ 0.25
MSI1-201ENST00000257552 ZSWIM5Q9P217 1185 aa16.6■□□□□ 0.25
MSI1-201ENST00000257552 SAR1BQ9Y6B6 198 aa16.6■□□□□ 0.25
MSI1-201ENST00000257552 EBAG9O00559 213 aa16.6■□□□□ 0.25
MSI1-201ENST00000257552 FMNL1O95466 1100 aaPredicted RBP16.6■□□□□ 0.25
MSI1-201ENST00000257552 IRAK1P51617 712 aa16.6■□□□□ 0.25
MSI1-201ENST00000257552 MCTP2Q6DN12 878 aa16.6■□□□□ 0.25
MSI1-201ENST00000257552 TRAPPC11Q7Z392 1133 aa16.6■□□□□ 0.25
MSI1-201ENST00000257552 CCDC51Q96ER9 411 aa16.6■□□□□ 0.25
MSI1-201ENST00000257552 SELENOOQ9BVL4 669 aa16.6■□□□□ 0.25
MSI1-201ENST00000257552 SAMM50Q9Y512 469 aa16.6■□□□□ 0.25
MSI1-201ENST00000257552 COL14A1Q05707 1796 aaKnown RBP16.6■□□□□ 0.25
MSI1-201ENST00000257552 SPATA31A5Q5VU36 1347 aa16.59■□□□□ 0.25
MSI1-201ENST00000257552 SPATA31A7Q8IWB4 1347 aa16.59■□□□□ 0.25
MSI1-201ENST00000257552 WDR19Q8NEZ3 1342 aa16.59■□□□□ 0.25
MSI1-201ENST00000257552 CCDC122Q5T0U0 273 aa16.59■□□□□ 0.25
MSI1-201ENST00000257552 FKBP15Q5T1M5 1219 aa16.59■□□□□ 0.25
MSI1-201ENST00000257552 RRAGBQ5VZM2 374 aa16.59■□□□□ 0.25
MSI1-201ENST00000257552 TRIM22Q8IYM9 498 aa16.59■□□□□ 0.25
MSI1-201ENST00000257552 BCAS4Q8TDM0 211 aa16.59■□□□□ 0.25
MSI1-201ENST00000257552 MYO1AQ9UBC5 1043 aa16.59■□□□□ 0.25
MSI1-201ENST00000257552 ZC3H4Q9UPT8 1303 aaKnown RBP16.59■□□□□ 0.25
MSI1-201ENST00000257552 hCG_1642624A0A1W2PR95 340 aa16.59■□□□□ 0.25
MSI1-201ENST00000257552 ERVV-1B6SEH8 477 aa16.59■□□□□ 0.25
MSI1-201ENST00000257552 AGPSO00116 658 aa16.59■□□□□ 0.25
MSI1-201ENST00000257552 NDUFA10O95299 355 aa16.59■□□□□ 0.25
MSI1-201ENST00000257552 VGLL2Q8N8G2 317 aa16.59■□□□□ 0.25
MSI1-201ENST00000257552 SYMPKQ92797 1274 aaKnown RBP16.59■□□□□ 0.25
MSI1-201ENST00000257552 UBAP1LF5GYI3 381 aa16.59■□□□□ 0.25
MSI1-201ENST00000257552 CAMTA2O94983 1202 aa16.59■□□□□ 0.25
MSI1-201ENST00000257552 UBXN1Q04323 297 aa16.59■□□□□ 0.25
MSI1-201ENST00000257552 TMEM87BQ96K49 555 aa16.59■□□□□ 0.25
MSI1-201ENST00000257552 GNL3LQ9NVN8 582 aaKnown RBP16.59■□□□□ 0.25
MSI1-201ENST00000257552 GOLGA6BA6NDN3 693 aa16.58■□□□□ 0.24
MSI1-201ENST00000257552 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.58■□□□□ 0.24
MSI1-201ENST00000257552 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.58■□□□□ 0.24
MSI1-201ENST00000257552 POLD4Q9HCU8 107 aa16.58■□□□□ 0.24
MSI1-201ENST00000257552 CPP00450 1065 aa16.58■□□□□ 0.24
MSI1-201ENST00000257552 BCAMP50895 628 aa16.58■□□□□ 0.24
MSI1-201ENST00000257552 COPB1P53618 953 aaKnown RBP16.58■□□□□ 0.24
MSI1-201ENST00000257552 TICAM2Q86XR7 235 aa16.58■□□□□ 0.24
MSI1-201ENST00000257552 ZNF579Q8NAF0 562 aaKnown RBP16.58■□□□□ 0.24
MSI1-201ENST00000257552 WASF1Q92558 559 aa16.58■□□□□ 0.24
MSI1-201ENST00000257552 IFNAR1P17181 557 aa16.57■□□□□ 0.24
MSI1-201ENST00000257552 C2orf54Q08AI8 447 aa16.57■□□□□ 0.24
MSI1-201ENST00000257552 JAKMIP2Q96AA8 810 aa16.57■□□□□ 0.24
MSI1-201ENST00000257552 ZNF532Q9HCE3 1301 aa16.57■□□□□ 0.24
MSI1-201ENST00000257552 GNGT1P63211 74 aa16.57■□□□□ 0.24
MSI1-201ENST00000257552 RTN1Q16799 776 aa16.57■□□□□ 0.24
MSI1-201ENST00000257552 SUGP1Q8IWZ8 645 aaKnown RBP16.57■□□□□ 0.24
MSI1-201ENST00000257552 FOXP1Q9H334 677 aaPredicted RBP16.57■□□□□ 0.24
MSI1-201ENST00000257552 CEP131Q9UPN4 1083 aa16.57■□□□□ 0.24
MSI1-201ENST00000257552 SLIT2O94813 1529 aa16.56■□□□□ 0.24
MSI1-201ENST00000257552 PDE2AO00408 941 aaPredicted RBP16.56■□□□□ 0.24
MSI1-201ENST00000257552 HNRNPH1P31943 449 aaKnown RBP16.56■□□□□ 0.24
MSI1-201ENST00000257552 ADD2P35612 726 aa16.56■□□□□ 0.24
MSI1-201ENST00000257552 EARS2Q5JPH6 523 aaKnown RBP16.56■□□□□ 0.24
MSI1-201ENST00000257552 C3orf67Q6ZVT6 689 aa16.56■□□□□ 0.24
MSI1-201ENST00000257552 SND1Q7KZF4 910 aaKnown RBP eCLIP16.56■□□□□ 0.24
MSI1-201ENST00000257552 CAPS2Q9BXY5 557 aa16.56■□□□□ 0.24
MSI1-201ENST00000257552 JADE2Q9NQC1 790 aa16.56■□□□□ 0.24
MSI1-201ENST00000257552 VPS54Q9P1Q0 977 aa16.56■□□□□ 0.24
MSI1-201ENST00000257552 TTC26A0AVF1 554 aa16.56■□□□□ 0.24
MSI1-201ENST00000257552 TOM1O60784 492 aa16.56■□□□□ 0.24
MSI1-201ENST00000257552 MATR3P43243 847 aaKnown RBP eCLIP16.56■□□□□ 0.24
MSI1-201ENST00000257552 RASGRF1Q13972 1273 aa16.56■□□□□ 0.24
MSI1-201ENST00000257552 PUM3Q15397 648 aaKnown RBP16.56■□□□□ 0.24
MSI1-201ENST00000257552 CCNI2Q6ZMN8 369 aaPredicted RBP16.56■□□□□ 0.24
MSI1-201ENST00000257552 KIAA1328Q86T90 577 aa16.56■□□□□ 0.24
MSI1-201ENST00000257552 SGMS1Q86VZ5 419 aa16.56■□□□□ 0.24
MSI1-201ENST00000257552 CDCA7Q9BWT1 371 aaPredicted RBP16.56■□□□□ 0.24
MSI1-201ENST00000257552 FBXO3Q9UK99 471 aa16.56■□□□□ 0.24
MSI1-201ENST00000257552 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.56■□□□□ 0.24
MSI1-201ENST00000257552 TRIM75PA6NK02 468 aa16.56■□□□□ 0.24
MSI1-201ENST00000257552 KCNJ18B7U540 433 aa16.56■□□□□ 0.24
MSI1-201ENST00000257552 WNT7AO00755 349 aa16.56■□□□□ 0.24
MSI1-201ENST00000257552 FECHP22830 423 aa16.56■□□□□ 0.24
MSI1-201ENST00000257552 MCM3P25205 808 aa16.56■□□□□ 0.24
MSI1-201ENST00000257552 KCNJ12Q14500 433 aa16.56■□□□□ 0.24
MSI1-201ENST00000257552 ZNF174Q15697 407 aa16.56■□□□□ 0.24
MSI1-201ENST00000257552 LINC00116Q8NCU8 138 aa16.56■□□□□ 0.24
MSI1-201ENST00000257552 RRP36Q96EU6 259 aaKnown RBP16.56■□□□□ 0.24
MSI1-201ENST00000257552 EEF2KMTQ96G04 330 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms