RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 PPP1R9AQ9ULJ8 1098 aa15.11■□□□□ 0.01
VPREB3-201ENST00000248948 ZNFX1Q9P2E3 1918 aaKnown RBP15.1■□□□□ 0.01
VPREB3-201ENST00000248948 ADCY3O60266 1144 aa15.1■□□□□ 0.01
VPREB3-201ENST00000248948 RANBP6O60518 1105 aaKnown RBP15.1■□□□□ 0.01
VPREB3-201ENST00000248948 MFSD6Q6ZSS7 791 aa15.1■□□□□ 0.01
VPREB3-201ENST00000248948 GPR142Q7Z601 462 aa15.1■□□□□ 0.01
VPREB3-201ENST00000248948 CCAR1Q8IX12 1150 aaKnown RBP15.1■□□□□ 0.01
VPREB3-201ENST00000248948 SHCBP1Q8NEM2 672 aa15.1■□□□□ 0.01
VPREB3-201ENST00000248948 ATG4CQ96DT6 458 aa15.1■□□□□ 0.01
VPREB3-201ENST00000248948 GMCL1Q96IK5 515 aa15.1■□□□□ 0.01
VPREB3-201ENST00000248948 PORCNQ9H237 461 aa15.1■□□□□ 0.01
VPREB3-201ENST00000248948 TOMM22Q9NS69 142 aa15.1■□□□□ 0.01
VPREB3-201ENST00000248948 TCP11L1Q9NUJ3 509 aa15.1■□□□□ 0.01
VPREB3-201ENST00000248948 ADAMTS5Q9UNA0 930 aa15.1■□□□□ 0.01
VPREB3-201ENST00000248948 STX8Q9UNK0 236 aa15.1■□□□□ 0.01
VPREB3-201ENST00000248948 TACC3Q9Y6A5 838 aa15.1■□□□□ 0.01
VPREB3-201ENST00000248948 NEDD4P46934 1319 aa15.1■□□□□ 0.01
VPREB3-201ENST00000248948 SGSM2O43147 1006 aa15.09■□□□□ 0.01
VPREB3-201ENST00000248948 RAD21O60216 631 aa15.09■□□□□ 0.01
VPREB3-201ENST00000248948 PEX10O60683 326 aa15.09■□□□□ 0.01
VPREB3-201ENST00000248948 XRCC5P13010 732 aaKnown RBP15.09■□□□□ 0.01
VPREB3-201ENST00000248948 UBXN2AP68543 259 aa15.09■□□□□ 0.01
VPREB3-201ENST00000248948 Q3C1V9 767 aa15.09■□□□□ 0.01
VPREB3-201ENST00000248948 PLEKHH3Q7Z736 793 aa15.09■□□□□ 0.01
VPREB3-201ENST00000248948 ESR2Q92731 530 aa15.09■□□□□ 0.01
VPREB3-201ENST00000248948 APBA2Q99767 749 aa15.09■□□□□ 0.01
VPREB3-201ENST00000248948 NUDT12Q9BQG2 462 aa15.09■□□□□ 0.01
VPREB3-201ENST00000248948 SLF1Q9BQI6 1058 aa15.09■□□□□ 0.01
VPREB3-201ENST00000248948 SPATC1LQ9H0A9 340 aa15.09■□□□□ 0.01
VPREB3-201ENST00000248948 CWC22Q9HCG8 908 aaKnown RBP15.09■□□□□ 0.01
VPREB3-201ENST00000248948 IL17RBQ9NRM6 502 aa15.09■□□□□ 0.01
VPREB3-201ENST00000248948 GJD2Q9UKL4 321 aa15.09■□□□□ 0.01
VPREB3-201ENST00000248948 HMGCRP04035 888 aa15.08■□□□□ 0
VPREB3-201ENST00000248948 COPB2P35606 906 aa15.08■□□□□ 0
VPREB3-201ENST00000248948 RGS2P41220 211 aa15.08■□□□□ 0
VPREB3-201ENST00000248948 RRP12Q5JTH9 1297 aaKnown RBP15.08■□□□□ 0
VPREB3-201ENST00000248948 ERICH6BQ5W0A0 696 aa15.08■□□□□ 0
VPREB3-201ENST00000248948 TRMT44Q8IYL2 757 aaKnown RBP15.08■□□□□ 0
VPREB3-201ENST00000248948 MOV10L1Q9BXT6 1211 aaKnown RBP15.08■□□□□ 0
VPREB3-201ENST00000248948 CNNM2Q9H8M5 875 aa15.08■□□□□ 0
VPREB3-201ENST00000248948 FBXO28Q9NVF7 368 aa15.08■□□□□ 0
VPREB3-201ENST00000248948 FEM1BQ9UK73 627 aa15.08■□□□□ 0
VPREB3-201ENST00000248948 TNRC18O15417 2968 aaPredicted RBP15.07■□□□□ 0
VPREB3-201ENST00000248948 SLC15A5A6NIM6 579 aa15.07■□□□□ 0
VPREB3-201ENST00000248948 VWA5AO00534 786 aa15.07■□□□□ 0
VPREB3-201ENST00000248948 NMT2O60551 498 aa15.07■□□□□ 0
VPREB3-201ENST00000248948 INHAP05111 366 aa15.07■□□□□ 0
VPREB3-201ENST00000248948 GRB14Q14449 540 aa15.07■□□□□ 0
VPREB3-201ENST00000248948 MORN1Q5T089 497 aa15.07■□□□□ 0
VPREB3-201ENST00000248948 SLFN13Q68D06 897 aa15.07■□□□□ 0
VPREB3-201ENST00000248948 USP6NLQ92738 828 aa15.07■□□□□ 0
VPREB3-201ENST00000248948 NUP88Q99567 741 aaPredicted RBP15.07■□□□□ 0
VPREB3-201ENST00000248948 TMEM106CQ9BVX2 250 aa15.07■□□□□ 0
VPREB3-201ENST00000248948 MROH8Q9H579 483 aa15.07■□□□□ 0
VPREB3-201ENST00000248948 INCENPQ9NQS7 918 aa15.07■□□□□ 0
VPREB3-201ENST00000248948 ZNF214Q9UL59 606 aaPredicted RBP15.07■□□□□ 0
VPREB3-201ENST00000248948 IVNS1ABPQ9Y6Y0 642 aa15.07■□□□□ 0
VPREB3-201ENST00000248948 MYH6P13533 1939 aa15.06■□□□□ 0
VPREB3-201ENST00000248948 SLC25A27O95847 323 aa15.06■□□□□ 0
VPREB3-201ENST00000248948 TOP1P11387 765 aaKnown RBP15.06■□□□□ 0
VPREB3-201ENST00000248948 BMP3P12645 472 aa15.06■□□□□ 0
VPREB3-201ENST00000248948 ELNP15502 786 aa15.06■□□□□ 0
VPREB3-201ENST00000248948 PTPREP23469 700 aa15.06■□□□□ 0
VPREB3-201ENST00000248948 SLC1A4P43007 532 aa15.06■□□□□ 0
VPREB3-201ENST00000248948 STAT2P52630 851 aa15.06■□□□□ 0
VPREB3-201ENST00000248948 MAP2K5Q13163 448 aa15.06■□□□□ 0
VPREB3-201ENST00000248948 TMEM132BQ14DG7 1078 aa15.06■□□□□ 0
VPREB3-201ENST00000248948 ABRAQ8N0Z2 381 aa15.06■□□□□ 0
VPREB3-201ENST00000248948 PRPF38AQ8NAV1 312 aaKnown RBP15.06■□□□□ 0
VPREB3-201ENST00000248948 REPS2Q8NFH8 660 aa15.06■□□□□ 0
VPREB3-201ENST00000248948 DCAF4Q8WV16 495 aa15.06■□□□□ 0
VPREB3-201ENST00000248948 TTC14Q96N46 770 aa15.06■□□□□ 0
VPREB3-201ENST00000248948 KRT23Q9C075 422 aa15.06■□□□□ 0
VPREB3-201ENST00000248948 U3KPZ7 1027 aaPredicted RBP15.06■□□□□ 0
VPREB3-201ENST00000248948 POTEFA5A3E0 1075 aa15.05■□□□□ -0
VPREB3-201ENST00000248948 ATP2A1O14983 1001 aa15.05■□□□□ -0
VPREB3-201ENST00000248948 PLA2G6O60733 806 aa15.05■□□□□ -0
VPREB3-201ENST00000248948 HOXC6P09630 235 aa15.05■□□□□ -0
VPREB3-201ENST00000248948 FDX1P10109 184 aa15.05■□□□□ -0
VPREB3-201ENST00000248948 ZKSCAN1P17029 563 aaPredicted RBP15.05■□□□□ -0
VPREB3-201ENST00000248948 ERCC3P19447 782 aa15.05■□□□□ -0
VPREB3-201ENST00000248948 OAZ1P54368 228 aa15.05■□□□□ -0
VPREB3-201ENST00000248948 MLLT1Q03111 559 aaPredicted RBP15.05■□□□□ -0
VPREB3-201ENST00000248948 CCDC178Q5BJE1 867 aa15.05■□□□□ -0
VPREB3-201ENST00000248948 WDR78Q5VTH9 848 aa15.05■□□□□ -0
VPREB3-201ENST00000248948 FAM160B2Q86V87 743 aa15.05■□□□□ -0
VPREB3-201ENST00000248948 IQCA1Q86XH1 822 aa15.05■□□□□ -0
VPREB3-201ENST00000248948 RIOX2Q8IUF8 465 aa15.05■□□□□ -0
VPREB3-201ENST00000248948 NKX2-3Q8TAU0 364 aa15.05■□□□□ -0
VPREB3-201ENST00000248948 TRIB2Q92519 343 aa15.05■□□□□ -0
VPREB3-201ENST00000248948 TEX13BQ9BXU2 312 aa15.05■□□□□ -0
VPREB3-201ENST00000248948 BIN2Q9UBW5 565 aaPredicted RBP15.05■□□□□ -0
VPREB3-201ENST00000248948 PDE4DIPQ5VU43 2346 aa15.04■□□□□ -0
VPREB3-201ENST00000248948 LRRC37A2A6NM11 1700 aa15.04■□□□□ -0
VPREB3-201ENST00000248948 STRNO43815 780 aa15.04■□□□□ -0
VPREB3-201ENST00000248948 CCL5P13501 91 aa15.04■□□□□ -0
VPREB3-201ENST00000248948 CAPN2P17655 700 aa15.04■□□□□ -0
VPREB3-201ENST00000248948 PLS1Q14651 629 aa15.04■□□□□ -0
VPREB3-201ENST00000248948 DGKHQ86XP1 1220 aa15.04■□□□□ -0
VPREB3-201ENST00000248948 TMEM47Q9BQJ4 181 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms