RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 USH1CQ9Y6N9 552 aa14.52□□□□□ -0.08
NEK9-201ENST00000238616 HEXIM1O94992 359 aaKnown RBP14.52□□□□□ -0.08
NEK9-201ENST00000238616 DPP9Q86TI2 863 aa14.52□□□□□ -0.08
NEK9-201ENST00000238616 NELFBQ8WX92 580 aa14.52□□□□□ -0.08
NEK9-201ENST00000238616 ANLNQ9NQW6 1124 aa14.52□□□□□ -0.08
NEK9-201ENST00000238616 LRFN2Q9ULH4 789 aa14.52□□□□□ -0.08
NEK9-201ENST00000238616 APOEP02649 317 aa14.52□□□□□ -0.09
NEK9-201ENST00000238616 MYL10Q9BUA6 226 aa14.52□□□□□ -0.09
NEK9-201ENST00000238616 BLZF1Q9H2G9 400 aa14.52□□□□□ -0.09
NEK9-201ENST00000238616 FLOT1O75955 427 aa14.52□□□□□ -0.09
NEK9-201ENST00000238616 OCM2P0CE71 109 aa14.52□□□□□ -0.09
NEK9-201ENST00000238616 OCMP0CE72 109 aaPredicted RBP14.52□□□□□ -0.09
NEK9-201ENST00000238616 AKAP4Q5JQC9 854 aa14.52□□□□□ -0.09
NEK9-201ENST00000238616 LRGUKQ96M69 825 aa14.52□□□□□ -0.09
NEK9-201ENST00000238616 LRRIQ4A6NIV6 560 aa14.52□□□□□ -0.09
NEK9-201ENST00000238616 LMNB1P20700 586 aa14.52□□□□□ -0.09
NEK9-201ENST00000238616 DLGAP5Q15398 846 aa14.52□□□□□ -0.09
NEK9-201ENST00000238616 LONRF2Q1L5Z9 754 aa14.52□□□□□ -0.09
NEK9-201ENST00000238616 CDCA7Q9BWT1 371 aaPredicted RBP14.52□□□□□ -0.09
NEK9-201ENST00000238616 TCP10L2B9ZVM9 353 aa14.51□□□□□ -0.09
NEK9-201ENST00000238616 TNNC2P02585 160 aa14.51□□□□□ -0.09
NEK9-201ENST00000238616 CCDC93Q567U6 631 aa14.51□□□□□ -0.09
NEK9-201ENST00000238616 MTRQ99707 1265 aa14.51□□□□□ -0.09
NEK9-201ENST00000238616 ZNF449Q6P9G9 518 aa14.51□□□□□ -0.09
NEK9-201ENST00000238616 MOSPD1Q9UJG1 213 aa14.51□□□□□ -0.09
NEK9-201ENST00000238616 SFMBT2Q5VUG0 894 aa14.51□□□□□ -0.09
NEK9-201ENST00000238616 RSRC2Q7L4I2 434 aaKnown RBP14.51□□□□□ -0.09
NEK9-201ENST00000238616 FAM207AQ9NSI2 230 aaPredicted RBP14.51□□□□□ -0.09
NEK9-201ENST00000238616 ABT1Q9ULW3 272 aaKnown RBP14.51□□□□□ -0.09
NEK9-201ENST00000238616 KDRP35968 1356 aa14.51□□□□□ -0.09
NEK9-201ENST00000238616 CUL7Q14999 1698 aa14.51□□□□□ -0.09
NEK9-201ENST00000238616 ADCY8P40145 1251 aa14.51□□□□□ -0.09
NEK9-201ENST00000238616 KLHL30Q0D2K2 578 aa14.51□□□□□ -0.09
NEK9-201ENST00000238616 TEKT1Q969V4 418 aa14.51□□□□□ -0.09
NEK9-201ENST00000238616 CPA1P15085 419 aa14.51□□□□□ -0.09
NEK9-201ENST00000238616 STAMQ92783 540 aa14.51□□□□□ -0.09
NEK9-201ENST00000238616 CPSF3Q9UKF6 684 aaKnown RBP14.51□□□□□ -0.09
NEK9-201ENST00000238616 A6NJR5 290 aa14.51□□□□□ -0.09
NEK9-201ENST00000238616 DEXIO95424 95 aa14.51□□□□□ -0.09
NEK9-201ENST00000238616 RRAGAQ7L523 313 aa14.51□□□□□ -0.09
NEK9-201ENST00000238616 C2CD5Q86YS7 1000 aa14.51□□□□□ -0.09
NEK9-201ENST00000238616 SECISBP2LQ93073 1101 aaKnown RBP14.51□□□□□ -0.09
NEK9-201ENST00000238616 SLITRK6Q9H5Y7 841 aa14.51□□□□□ -0.09
NEK9-201ENST00000238616 TPX2Q9ULW0 747 aaKnown RBP14.51□□□□□ -0.09
NEK9-201ENST00000238616 MRC2Q9UBG0 1479 aa14.51□□□□□ -0.09
NEK9-201ENST00000238616 PPWD1Q96BP3 646 aaKnown RBP14.51□□□□□ -0.09
NEK9-201ENST00000238616 LSM14BQ9BX40 385 aaKnown RBP14.51□□□□□ -0.09
NEK9-201ENST00000238616 SCHIP1Q9P0W5 487 aaPredicted RBP14.51□□□□□ -0.09
NEK9-201ENST00000238616 TMOD1P28289 359 aa14.5□□□□□ -0.09
NEK9-201ENST00000238616 RINT1Q6NUQ1 792 aa14.5□□□□□ -0.09
NEK9-201ENST00000238616 NLRC4Q9NPP4 1024 aa14.5□□□□□ -0.09
NEK9-201ENST00000238616 YWHAEP62258 255 aaKnown RBP14.5□□□□□ -0.09
NEK9-201ENST00000238616 MYL5Q02045 173 aa14.5□□□□□ -0.09
NEK9-201ENST00000238616 FAM71BQ8TC56 605 aa14.5□□□□□ -0.09
NEK9-201ENST00000238616 INPP5BP32019 993 aa14.5□□□□□ -0.09
NEK9-201ENST00000238616 RASSF2P50749 326 aa14.5□□□□□ -0.09
NEK9-201ENST00000238616 RAB20Q9NX57 234 aa14.5□□□□□ -0.09
NEK9-201ENST00000238616 KCNH3Q9ULD8 1083 aa14.5□□□□□ -0.09
NEK9-201ENST00000238616 SGK1O00141 431 aa14.5□□□□□ -0.09
NEK9-201ENST00000238616 ALAS1P13196 640 aa14.5□□□□□ -0.09
NEK9-201ENST00000238616 CFAP221Q4G0U5 840 aa14.5□□□□□ -0.09
NEK9-201ENST00000238616 GBP5Q96PP8 586 aa14.5□□□□□ -0.09
NEK9-201ENST00000238616 SUGT1Q9Y2Z0 365 aa14.5□□□□□ -0.09
NEK9-201ENST00000238616 PLCH2O75038 1416 aa14.5□□□□□ -0.09
NEK9-201ENST00000238616 THAP12O43422 761 aa14.5□□□□□ -0.09
NEK9-201ENST00000238616 IDI1Q13907 227 aa14.5□□□□□ -0.09
NEK9-201ENST00000238616 CCDC38Q502W7 563 aa14.5□□□□□ -0.09
NEK9-201ENST00000238616 CMTR1Q8N1G2 835 aaKnown RBP14.5□□□□□ -0.09
NEK9-201ENST00000238616 STX2P32856 288 aa14.49□□□□□ -0.09
NEK9-201ENST00000238616 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.49□□□□□ -0.09
NEK9-201ENST00000238616 K7ENM7 598 aa14.49□□□□□ -0.09
NEK9-201ENST00000238616 ZNF467Q7Z7K2 595 aaPredicted RBP14.49□□□□□ -0.09
NEK9-201ENST00000238616 SULF1Q8IWU6 871 aa14.49□□□□□ -0.09
NEK9-201ENST00000238616 TBC1D32Q96NH3 1257 aa14.49□□□□□ -0.09
NEK9-201ENST00000238616 PCDH11XQ9BZA7 1347 aa14.49□□□□□ -0.09
NEK9-201ENST00000238616 PCDH11YQ9BZA8 1340 aa14.49□□□□□ -0.09
NEK9-201ENST00000238616 ABCC1P33527 1531 aa14.49□□□□□ -0.09
NEK9-201ENST00000238616 SYNJ1O43426 1573 aa14.49□□□□□ -0.09
NEK9-201ENST00000238616 RGS16O15492 202 aaPredicted RBP14.49□□□□□ -0.09
NEK9-201ENST00000238616 RPS6KA1Q15418 735 aa14.49□□□□□ -0.09
NEK9-201ENST00000238616 FAM47AQ5JRC9 791 aa14.49□□□□□ -0.09
NEK9-201ENST00000238616 TTC38Q5R3I4 469 aa14.49□□□□□ -0.09
NEK9-201ENST00000238616 DDX41Q9UJV9 622 aaKnown RBP14.49□□□□□ -0.09
NEK9-201ENST00000238616 GIGYF1O75420 1035 aaPredicted RBP14.49□□□□□ -0.09
NEK9-201ENST00000238616 NR1H4Q96RI1 486 aaPredicted RBP14.49□□□□□ -0.09
NEK9-201ENST00000238616 SEPT9Q9UHD8 586 aaPredicted RBP14.49□□□□□ -0.09
NEK9-201ENST00000238616 UBN2Q6ZU65 1347 aa14.49□□□□□ -0.09
NEK9-201ENST00000238616 SLC9A5Q14940 896 aa14.49□□□□□ -0.09
NEK9-201ENST00000238616 HACD3Q9P035 362 aa14.49□□□□□ -0.09
NEK9-201ENST00000238616 NDUFB9Q9Y6M9 179 aa14.49□□□□□ -0.09
NEK9-201ENST00000238616 MAST3O60307 1309 aa14.49□□□□□ -0.09
NEK9-201ENST00000238616 ADGRF5Q8IZF2 1346 aa14.49□□□□□ -0.09
NEK9-201ENST00000238616 MIER3Q7Z3K6 550 aa14.49□□□□□ -0.09
NEK9-201ENST00000238616 CCDC87Q9NVE4 849 aa14.49□□□□□ -0.09
NEK9-201ENST00000238616 THRAP3Q9Y2W1 955 aaKnown RBP14.49□□□□□ -0.09
NEK9-201ENST00000238616 STK24Q9Y6E0 443 aa14.49□□□□□ -0.09
NEK9-201ENST00000238616 XRCC5P13010 732 aaKnown RBP14.49□□□□□ -0.09
NEK9-201ENST00000238616 TECP42680 631 aa14.49□□□□□ -0.09
NEK9-201ENST00000238616 GNPTABQ3T906 1256 aa14.49□□□□□ -0.09
NEK9-201ENST00000238616 ZBTB41Q5SVQ8 909 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms