RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 PPP2R5AQ15172 486 aa10.64□□□□□ -0.71
HLA-DOA-201ENST00000229829 LONRF2Q1L5Z9 754 aa10.64□□□□□ -0.71
HLA-DOA-201ENST00000229829 POTEAQ6S8J7 498 aa10.64□□□□□ -0.71
HLA-DOA-201ENST00000229829 FCHSD1Q86WN1 690 aa10.64□□□□□ -0.71
HLA-DOA-201ENST00000229829 ZNF34Q8IZ26 560 aa10.64□□□□□ -0.71
HLA-DOA-201ENST00000229829 PPM1EQ8WY54 764 aa10.64□□□□□ -0.71
HLA-DOA-201ENST00000229829 KIFC2Q96AC6 838 aa10.64□□□□□ -0.71
HLA-DOA-201ENST00000229829 LZTFL1Q9NQ48 299 aa10.64□□□□□ -0.71
HLA-DOA-201ENST00000229829 COL4A1P02462 1669 aa10.64□□□□□ -0.71
HLA-DOA-201ENST00000229829 SBF1O95248 1867 aa10.64□□□□□ -0.71
HLA-DOA-201ENST00000229829 ERICH2A1L162 156 aa10.64□□□□□ -0.71
HLA-DOA-201ENST00000229829 MAGEA9P43362 315 aa10.64□□□□□ -0.71
HLA-DOA-201ENST00000229829 NUTM2AQ8IVF1 878 aaPredicted RBP10.64□□□□□ -0.71
HLA-DOA-201ENST00000229829 ABCF2Q9UG63 623 aa10.64□□□□□ -0.71
HLA-DOA-201ENST00000229829 CEP83Q9Y592 693 aa10.64□□□□□ -0.71
HLA-DOA-201ENST00000229829 TNKSO95271 1327 aa10.64□□□□□ -0.71
HLA-DOA-201ENST00000229829 TFRCP02786 760 aaKnown RBP10.64□□□□□ -0.71
HLA-DOA-201ENST00000229829 CCDC172P0C7W6 258 aa10.64□□□□□ -0.71
HLA-DOA-201ENST00000229829 CHRM1P11229 460 aaPredicted RBP10.64□□□□□ -0.71
HLA-DOA-201ENST00000229829 PPARAQ07869 468 aa10.64□□□□□ -0.71
HLA-DOA-201ENST00000229829 PKN1Q16512 942 aa10.64□□□□□ -0.71
HLA-DOA-201ENST00000229829 RAD9BQ6WBX8 426 aa10.64□□□□□ -0.71
HLA-DOA-201ENST00000229829 SPATA20Q8TB22 786 aa10.64□□□□□ -0.71
HLA-DOA-201ENST00000229829 BTG4Q9NY30 223 aa10.64□□□□□ -0.71
HLA-DOA-201ENST00000229829 MRFAP1Q9Y605 127 aa10.64□□□□□ -0.71
HLA-DOA-201ENST00000229829 A0A0G2JS52 829 aa10.63□□□□□ -0.71
HLA-DOA-201ENST00000229829 PLEKHA8P1O95397 391 aa10.63□□□□□ -0.71
HLA-DOA-201ENST00000229829 RBL2Q08999 1139 aa10.63□□□□□ -0.71
HLA-DOA-201ENST00000229829 ELOA2Q8IYF1 753 aaPredicted RBP10.63□□□□□ -0.71
HLA-DOA-201ENST00000229829 HINFPQ9BQA5 517 aa10.63□□□□□ -0.71
HLA-DOA-201ENST00000229829 UBAC1Q9BSL1 405 aa10.63□□□□□ -0.71
HLA-DOA-201ENST00000229829 NACAP1Q9BZK3 213 aa10.63□□□□□ -0.71
HLA-DOA-201ENST00000229829 A0A1B0GTH6 734 aa10.63□□□□□ -0.71
HLA-DOA-201ENST00000229829 MYO1BO43795 1136 aa10.63□□□□□ -0.71
HLA-DOA-201ENST00000229829 ABL1P00519 1130 aa10.63□□□□□ -0.71
HLA-DOA-201ENST00000229829 CYP7A1P22680 504 aa10.63□□□□□ -0.71
HLA-DOA-201ENST00000229829 PSEN1P49768 467 aa10.63□□□□□ -0.71
HLA-DOA-201ENST00000229829 PLCD1P51178 756 aa10.63□□□□□ -0.71
HLA-DOA-201ENST00000229829 ZNF579Q8NAF0 562 aaKnown RBP10.63□□□□□ -0.71
HLA-DOA-201ENST00000229829 SYMPKQ92797 1274 aaKnown RBP10.63□□□□□ -0.71
HLA-DOA-201ENST00000229829 TRPC5Q9UL62 973 aaPredicted RBP10.63□□□□□ -0.71
HLA-DOA-201ENST00000229829 V9GY48 417 aaPredicted RBP10.63□□□□□ -0.71
HLA-DOA-201ENST00000229829 MYH2Q9UKX2 1941 aa10.63□□□□□ -0.71
HLA-DOA-201ENST00000229829 ADAMTS3O15072 1205 aa10.63□□□□□ -0.71
HLA-DOA-201ENST00000229829 DPYDQ12882 1025 aa10.63□□□□□ -0.71
HLA-DOA-201ENST00000229829 SEC23AQ15436 765 aa10.63□□□□□ -0.71
HLA-DOA-201ENST00000229829 ZNF174Q15697 407 aa10.63□□□□□ -0.71
HLA-DOA-201ENST00000229829 PAGE5Q96GU1 130 aa10.63□□□□□ -0.71
HLA-DOA-201ENST00000229829 MYH6P13533 1939 aa10.62□□□□□ -0.71
HLA-DOA-201ENST00000229829 SETQ01105 290 aaPredicted RBP10.62□□□□□ -0.71
HLA-DOA-201ENST00000229829 ENAHQ8N8S7 591 aaPredicted RBP10.62□□□□□ -0.71
HLA-DOA-201ENST00000229829 GIMAP7Q8NHV1 300 aa10.62□□□□□ -0.71
HLA-DOA-201ENST00000229829 EXOC4Q96A65 974 aa10.62□□□□□ -0.71
HLA-DOA-201ENST00000229829 BRMS1Q9HCU9 246 aa10.62□□□□□ -0.71
HLA-DOA-201ENST00000229829 SUFUQ9UMX1 484 aa10.62□□□□□ -0.71
HLA-DOA-201ENST00000229829 NID2Q14112 1375 aa10.62□□□□□ -0.71
HLA-DOA-201ENST00000229829 TRIM75PA6NK02 468 aa10.62□□□□□ -0.71
HLA-DOA-201ENST00000229829 EIF3JO75822 258 aaKnown RBP10.62□□□□□ -0.71
HLA-DOA-201ENST00000229829 VEGFAP15692 232 aaPredicted RBP10.62□□□□□ -0.71
HLA-DOA-201ENST00000229829 ATP6V1AP38606 617 aa10.62□□□□□ -0.71
HLA-DOA-201ENST00000229829 DYNLL1P63167 89 aaKnown RBP10.62□□□□□ -0.71
HLA-DOA-201ENST00000229829 IGSF22Q8N9C0 903 aa10.62□□□□□ -0.71
HLA-DOA-201ENST00000229829 BLZF1Q9H2G9 400 aa10.62□□□□□ -0.71
HLA-DOA-201ENST00000229829 DACH1Q9UI36 760 aa10.62□□□□□ -0.71
HLA-DOA-201ENST00000229829 PNPLA7Q6ZV29 1317 aa10.62□□□□□ -0.71
HLA-DOA-201ENST00000229829 DOCK2Q92608 1830 aa10.61□□□□□ -0.71
HLA-DOA-201ENST00000229829 CCDC196A0A1B0GTZ2 297 aa10.61□□□□□ -0.71
HLA-DOA-201ENST00000229829 FRMD3A2A2Y4 597 aa10.61□□□□□ -0.71
HLA-DOA-201ENST00000229829 AKR1B15C9JRZ8 316 aaPredicted RBP10.61□□□□□ -0.71
HLA-DOA-201ENST00000229829 HMGB2P26583 209 aaKnown RBP10.61□□□□□ -0.71
HLA-DOA-201ENST00000229829 CDC25AP30304 524 aa10.61□□□□□ -0.71
HLA-DOA-201ENST00000229829 GYG1P46976 350 aa10.61□□□□□ -0.71
HLA-DOA-201ENST00000229829 ATP2B2Q01814 1243 aa10.61□□□□□ -0.71
HLA-DOA-201ENST00000229829 CUL4BQ13620 913 aa10.61□□□□□ -0.71
HLA-DOA-201ENST00000229829 FBXW10Q5XX13 1052 aa10.61□□□□□ -0.71
HLA-DOA-201ENST00000229829 RSRC2Q7L4I2 434 aaKnown RBP10.61□□□□□ -0.71
HLA-DOA-201ENST00000229829 TRIML1Q8N9V2 468 aa10.61□□□□□ -0.71
HLA-DOA-201ENST00000229829 SLC24A3Q9HC58 644 aa10.61□□□□□ -0.71
HLA-DOA-201ENST00000229829 AKAP17AQ02040 695 aaKnown RBP10.61□□□□□ -0.71
HLA-DOA-201ENST00000229829 CHRNDQ07001 517 aa10.61□□□□□ -0.71
HLA-DOA-201ENST00000229829 FUT2Q10981 343 aa10.61□□□□□ -0.71
HLA-DOA-201ENST00000229829 TTC19Q6DKK2 380 aaPredicted RBP10.61□□□□□ -0.71
HLA-DOA-201ENST00000229829 ADGRG1Q9Y653 693 aa10.61□□□□□ -0.71
HLA-DOA-201ENST00000229829 ERVV-1B6SEH8 477 aa10.61□□□□□ -0.71
HLA-DOA-201ENST00000229829 PPP1R3GB7ZBB8 358 aa10.61□□□□□ -0.71
HLA-DOA-201ENST00000229829 RNF225M0QZC1 329 aaPredicted RBP10.61□□□□□ -0.71
HLA-DOA-201ENST00000229829 TPM1P09493 284 aa10.61□□□□□ -0.71
HLA-DOA-201ENST00000229829 ERCC5P28715 1186 aaPredicted RBP10.61□□□□□ -0.71
HLA-DOA-201ENST00000229829 CASP14P31944 242 aa10.61□□□□□ -0.71
HLA-DOA-201ENST00000229829 IL6STP40189 918 aaPredicted RBP10.61□□□□□ -0.71
HLA-DOA-201ENST00000229829 CCT6AP40227 531 aaKnown RBP10.61□□□□□ -0.71
HLA-DOA-201ENST00000229829 FXR1P51114 621 aaKnown RBP eCLIP10.61□□□□□ -0.71
HLA-DOA-201ENST00000229829 PHF20Q9BVI0 1012 aa10.61□□□□□ -0.71
HLA-DOA-201ENST00000229829 AATFQ9NY61 560 aaKnown RBP eCLIP10.61□□□□□ -0.71
HLA-DOA-201ENST00000229829 ADD3Q9UEY8 706 aaKnown RBP10.61□□□□□ -0.71
HLA-DOA-201ENST00000229829 CEP131Q9UPN4 1083 aa10.61□□□□□ -0.71
HLA-DOA-201ENST00000229829 SYNRGQ9UMZ2 1314 aa10.61□□□□□ -0.71
HLA-DOA-201ENST00000229829 NMT2O60551 498 aa10.6□□□□□ -0.71
HLA-DOA-201ENST00000229829 GNAT2P19087 354 aa10.6□□□□□ -0.71
HLA-DOA-201ENST00000229829 SPATA1Q5VX52 437 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms