RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 SF3B2Q13435 895 aaKnown RBP20.14■□□□□ 0.81
GCDH-201ENST00000222214 DPCR1Q3MIW9 517 aa20.14■□□□□ 0.81
GCDH-201ENST00000222214 ASPRV1Q53RT3 343 aa20.14■□□□□ 0.81
GCDH-201ENST00000222214 RRP36Q96EU6 259 aaKnown RBP20.14■□□□□ 0.81
GCDH-201ENST00000222214 MRFAP1L1Q96HT8 127 aa20.14■□□□□ 0.81
GCDH-201ENST00000222214 IDI2Q9BXS1 227 aa20.14■□□□□ 0.81
GCDH-201ENST00000222214 BAG6P46379 1132 aa20.14■□□□□ 0.81
GCDH-201ENST00000222214 ARL6IP4Q66PJ3 421 aaKnown RBP20.14■□□□□ 0.81
GCDH-201ENST00000222214 METTL16Q86W50 562 aaKnown RBP20.14■□□□□ 0.81
GCDH-201ENST00000222214 PIBF1Q8WXW3 757 aa20.14■□□□□ 0.81
GCDH-201ENST00000222214 SEC63Q9UGP8 760 aaKnown RBP20.14■□□□□ 0.81
GCDH-201ENST00000222214 STXBP3O00186 592 aa20.13■□□□□ 0.81
GCDH-201ENST00000222214 IKBKBO14920 756 aa20.13■□□□□ 0.81
GCDH-201ENST00000222214 POLR2DO15514 142 aaKnown RBP20.13■□□□□ 0.81
GCDH-201ENST00000222214 TTLL1O95922 423 aa20.13■□□□□ 0.81
GCDH-201ENST00000222214 GRIN1Q05586 938 aa20.13■□□□□ 0.81
GCDH-201ENST00000222214 WWC2Q6AWC2 1192 aa20.13■□□□□ 0.81
GCDH-201ENST00000222214 AOPEPQ8N6M6 819 aa20.13■□□□□ 0.81
GCDH-201ENST00000222214 ADAMTSL1Q8N6G6 1762 aa20.13■□□□□ 0.81
GCDH-201ENST00000222214 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.12■□□□□ 0.81
GCDH-201ENST00000222214 CCDC194A0A1B0GVG4 234 aa20.12■□□□□ 0.81
GCDH-201ENST00000222214 M0R2N6 131 aa20.12■□□□□ 0.81
GCDH-201ENST00000222214 MDM2Q00987 491 aaPredicted RBP20.12■□□□□ 0.81
GCDH-201ENST00000222214 ZNF174Q15697 407 aa20.12■□□□□ 0.81
GCDH-201ENST00000222214 HEATR3Q7Z4Q2 680 aa20.12■□□□□ 0.81
GCDH-201ENST00000222214 KIAA0825Q8IV33 1275 aa20.12■□□□□ 0.81
GCDH-201ENST00000222214 GPKOWQ92917 476 aaPredicted RBP eCLIP20.12■□□□□ 0.81
GCDH-201ENST00000222214 ZMYND12Q9H0C1 365 aa20.12■□□□□ 0.81
GCDH-201ENST00000222214 SCN9AQ15858 1988 aa20.12■□□□□ 0.81
GCDH-201ENST00000222214 AKR1B1P15121 316 aa20.12■□□□□ 0.81
GCDH-201ENST00000222214 VEGFAP15692 232 aaPredicted RBP20.12■□□□□ 0.81
GCDH-201ENST00000222214 GNA11P29992 359 aa20.12■□□□□ 0.81
GCDH-201ENST00000222214 PTGDRQ13258 359 aa20.12■□□□□ 0.81
GCDH-201ENST00000222214 PNOCQ13519 176 aa20.12■□□□□ 0.81
GCDH-201ENST00000222214 POSTNQ15063 836 aa20.12■□□□□ 0.81
GCDH-201ENST00000222214 SLC35G1Q2M3R5 365 aa20.12■□□□□ 0.81
GCDH-201ENST00000222214 SPECC1Q5M775 1068 aa20.12■□□□□ 0.81
GCDH-201ENST00000222214 NT5DC1Q5TFE4 455 aa20.12■□□□□ 0.81
GCDH-201ENST00000222214 TRIML1Q8N9V2 468 aa20.12■□□□□ 0.81
GCDH-201ENST00000222214 GREB1LQ9C091 1923 aaPredicted RBP20.11■□□□□ 0.81
GCDH-201ENST00000222214 SNHG28P0DPA3 235 aa20.11■□□□□ 0.81
GCDH-201ENST00000222214 PDHBP11177 359 aa20.11■□□□□ 0.81
GCDH-201ENST00000222214 SHMT1P34896 483 aa20.11■□□□□ 0.81
GCDH-201ENST00000222214 USP17L2Q6R6M4 530 aa20.11■□□□□ 0.81
GCDH-201ENST00000222214 SLC16A10Q8TF71 515 aa20.11■□□□□ 0.81
GCDH-201ENST00000222214 RIOX1Q9H6W3 641 aa20.11■□□□□ 0.81
GCDH-201ENST00000222214 MTMR7Q9Y216 660 aa20.11■□□□□ 0.81
GCDH-201ENST00000222214 BIN1O00499 593 aa20.1■□□□□ 0.81
GCDH-201ENST00000222214 MYO1BO43795 1136 aa20.1■□□□□ 0.81
GCDH-201ENST00000222214 GOLGA8HP0CJ92 632 aa20.1■□□□□ 0.81
GCDH-201ENST00000222214 AOC3Q16853 763 aa20.1■□□□□ 0.81
GCDH-201ENST00000222214 DRC7Q8IY82 874 aa20.1■□□□□ 0.81
GCDH-201ENST00000222214 RTKN2Q8IZC4 609 aa20.1■□□□□ 0.81
GCDH-201ENST00000222214 C6orf50Q9HD87 102 aa20.1■□□□□ 0.81
GCDH-201ENST00000222214 KCNQ5Q9NR82 932 aa20.1■□□□□ 0.81
GCDH-201ENST00000222214 PI4KBQ9UBF8 816 aa20.1■□□□□ 0.81
GCDH-201ENST00000222214 DACH1Q9UI36 760 aa20.1■□□□□ 0.81
GCDH-201ENST00000222214 ESYT2A0FGR8 921 aa20.1■□□□□ 0.81
GCDH-201ENST00000222214 LAD1O00515 517 aa20.1■□□□□ 0.81
GCDH-201ENST00000222214 SERTAD1Q9UHV2 236 aa20.1■□□□□ 0.81
GCDH-201ENST00000222214 PCDHA6Q9UN73 950 aa20.1■□□□□ 0.81
GCDH-201ENST00000222214 PCDHA8Q9Y5H6 950 aa20.1■□□□□ 0.81
GCDH-201ENST00000222214 PCDHA5Q9Y5H7 936 aa20.1■□□□□ 0.81
GCDH-201ENST00000222214 PSME4Q14997 1843 aa20.09■□□□□ 0.81
GCDH-201ENST00000222214 ACTN4O43707 911 aaKnown RBP20.09■□□□□ 0.81
GCDH-201ENST00000222214 RBM5P52756 815 aaKnown RBP eCLIP20.09■□□□□ 0.81
GCDH-201ENST00000222214 NAPAP54920 295 aa20.09■□□□□ 0.81
GCDH-201ENST00000222214 CCDC93Q567U6 631 aa20.09■□□□□ 0.81
GCDH-201ENST00000222214 SOGA3Q5TF21 947 aa20.09■□□□□ 0.81
GCDH-201ENST00000222214 TYW1BQ6NUM6 668 aa20.09■□□□□ 0.81
GCDH-201ENST00000222214 KRT25Q7Z3Z0 450 aa20.09■□□□□ 0.81
GCDH-201ENST00000222214 TTLL6Q8N841 843 aa20.09■□□□□ 0.81
GCDH-201ENST00000222214 SPC24Q8NBT2 197 aa20.09■□□□□ 0.81
GCDH-201ENST00000222214 ZNF219Q9P2Y4 722 aaPredicted RBP20.09■□□□□ 0.81
GCDH-201ENST00000222214 CLIP2Q9UDT6 1046 aa20.09■□□□□ 0.81
GCDH-201ENST00000222214 A0A087WWV3 80 aa20.08■□□□□ 0.81
GCDH-201ENST00000222214 PPIP5K2O43314 1243 aa20.08■□□□□ 0.81
GCDH-201ENST00000222214 SMC2O95347 1197 aa20.08■□□□□ 0.81
GCDH-201ENST00000222214 COL2A1P02458 1487 aaPredicted RBP20.08■□□□□ 0.81
GCDH-201ENST00000222214 SLFN14P0C7P3 912 aa20.08■□□□□ 0.81
GCDH-201ENST00000222214 LONP1P36776 959 aaKnown RBP20.08■□□□□ 0.81
GCDH-201ENST00000222214 NFIAQ12857 509 aa20.08■□□□□ 0.81
GCDH-201ENST00000222214 NOM1Q5C9Z4 860 aaKnown RBP20.08■□□□□ 0.81
GCDH-201ENST00000222214 GPATCH4Q5T3I0 446 aaKnown RBP20.08■□□□□ 0.81
GCDH-201ENST00000222214 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.08■□□□□ 0.81
GCDH-201ENST00000222214 SYMPKQ92797 1274 aaKnown RBP20.08■□□□□ 0.81
GCDH-201ENST00000222214 SMARCE1Q969G3 411 aa20.08■□□□□ 0.81
GCDH-201ENST00000222214 PSMD1Q99460 953 aa20.08■□□□□ 0.81
GCDH-201ENST00000222214 USP17L5A8MUK1 530 aa20.08■□□□□ 0.8
GCDH-201ENST00000222214 MCM7P33993 719 aa20.08■□□□□ 0.8
GCDH-201ENST00000222214 SARSP49591 514 aaKnown RBP20.08■□□□□ 0.8
GCDH-201ENST00000222214 FOXP4Q8IVH2 680 aaPredicted RBP20.08■□□□□ 0.8
GCDH-201ENST00000222214 VPS33BQ9H267 617 aa20.08■□□□□ 0.8
GCDH-201ENST00000222214 VWA3AA6NCI4 1184 aa20.07■□□□□ 0.8
GCDH-201ENST00000222214 WNT7AO00755 349 aa20.07■□□□□ 0.8
GCDH-201ENST00000222214 ORC2Q13416 577 aaPredicted RBP20.07■□□□□ 0.8
GCDH-201ENST00000222214 CT47A1Q5JQC4 288 aaPredicted RBP20.07■□□□□ 0.8
GCDH-201ENST00000222214 MLKLQ8NB16 471 aa20.07■□□□□ 0.8
GCDH-201ENST00000222214 SPATA20Q8TB22 786 aa20.07■□□□□ 0.8
GCDH-201ENST00000222214 TTC12Q9H892 705 aaPredicted RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms