RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 GOLGA8BA8MQT2 603 aa15.37■□□□□ 0.05
TIMP1-201ENST00000218388 PARP1P09874 1014 aaKnown RBP15.37■□□□□ 0.05
TIMP1-201ENST00000218388 SNHG28P0DPA3 235 aa15.37■□□□□ 0.05
TIMP1-201ENST00000218388 PDHBP11177 359 aa15.37■□□□□ 0.05
TIMP1-201ENST00000218388 BMP3P12645 472 aa15.37■□□□□ 0.05
TIMP1-201ENST00000218388 TROAPQ12815 778 aa15.37■□□□□ 0.05
TIMP1-201ENST00000218388 PPP2R5BQ15173 497 aa15.37■□□□□ 0.05
TIMP1-201ENST00000218388 MICU3Q86XE3 530 aa15.37■□□□□ 0.05
TIMP1-201ENST00000218388 TANGO6Q9C0B7 1094 aa15.37■□□□□ 0.05
TIMP1-201ENST00000218388 PNMA3Q9UL41 463 aa15.37■□□□□ 0.05
TIMP1-201ENST00000218388 WDR33Q9C0J8 1336 aaKnown RBP15.37■□□□□ 0.05
TIMP1-201ENST00000218388 CCDC196A0A1B0GTZ2 297 aa15.36■□□□□ 0.05
TIMP1-201ENST00000218388 GOLGA8AA7E2F4 631 aa15.36■□□□□ 0.05
TIMP1-201ENST00000218388 USP17L15C9J2P7 530 aa15.36■□□□□ 0.05
TIMP1-201ENST00000218388 USP17L13C9JLJ4 530 aa15.36■□□□□ 0.05
TIMP1-201ENST00000218388 USP17L11C9JVI0 530 aa15.36■□□□□ 0.05
TIMP1-201ENST00000218388 USP17L18D6R9N7 530 aa15.36■□□□□ 0.05
TIMP1-201ENST00000218388 USP17L22D6RA61 530 aa15.36■□□□□ 0.05
TIMP1-201ENST00000218388 USP17L17D6RBQ6 530 aa15.36■□□□□ 0.05
TIMP1-201ENST00000218388 USP17L19D6RCP7 530 aa15.36■□□□□ 0.05
TIMP1-201ENST00000218388 USP17L20D6RJB6 530 aa15.36■□□□□ 0.05
TIMP1-201ENST00000218388 OSBPP22059 807 aa15.36■□□□□ 0.05
TIMP1-201ENST00000218388 MAP2K2P36507 400 aa15.36■□□□□ 0.05
TIMP1-201ENST00000218388 GNAQP50148 359 aa15.36■□□□□ 0.05
TIMP1-201ENST00000218388 METAP2P50579 478 aaKnown RBP eCLIP15.36■□□□□ 0.056e-10■□□□□ 10.7
TIMP1-201ENST00000218388 EVCP57679 992 aa15.36■□□□□ 0.05
TIMP1-201ENST00000218388 HTRA3P83110 453 aa15.36■□□□□ 0.05
TIMP1-201ENST00000218388 ZNF543Q08ER8 600 aa15.36■□□□□ 0.05
TIMP1-201ENST00000218388 USP17L24Q0WX57 530 aa15.36■□□□□ 0.05
TIMP1-201ENST00000218388 GRM4Q14833 912 aa15.36■□□□□ 0.05
TIMP1-201ENST00000218388 FAM83BQ5T0W9 1011 aa15.36■□□□□ 0.05
TIMP1-201ENST00000218388 ANKRD23Q86SG2 305 aa15.36■□□□□ 0.05
TIMP1-201ENST00000218388 BRI3BPQ8WY22 251 aa15.36■□□□□ 0.05
TIMP1-201ENST00000218388 CHMP4CQ96CF2 233 aa15.36■□□□□ 0.05
TIMP1-201ENST00000218388 ZNF274Q96GC6 653 aaPredicted RBP15.36■□□□□ 0.05
TIMP1-201ENST00000218388 RPAP3Q9H6T3 665 aaPredicted RBP15.36■□□□□ 0.05
TIMP1-201ENST00000218388 ZCCHC17Q9NP64 241 aaKnown RBP15.36■□□□□ 0.05
TIMP1-201ENST00000218388 RBM28Q9NW13 759 aaKnown RBP15.36■□□□□ 0.05
TIMP1-201ENST00000218388 BRPF3Q9ULD4 1205 aa15.36■□□□□ 0.05
TIMP1-201ENST00000218388 LIMCH1Q9UPQ0 1083 aa15.36■□□□□ 0.05
TIMP1-201ENST00000218388 SLC45A1Q9Y2W3 748 aa15.36■□□□□ 0.05
TIMP1-201ENST00000218388 HOXA7P31268 230 aaPredicted RBP15.35■□□□□ 0.05
TIMP1-201ENST00000218388 VEGFBP49765 207 aa15.35■□□□□ 0.05
TIMP1-201ENST00000218388 STAT2P52630 851 aa15.35■□□□□ 0.05
TIMP1-201ENST00000218388 IRX3P78415 501 aaPredicted RBP15.35■□□□□ 0.05
TIMP1-201ENST00000218388 KIF23Q02241 960 aaPredicted RBP15.35■□□□□ 0.05
TIMP1-201ENST00000218388 IKQ13123 557 aaPredicted RBP15.35■□□□□ 0.05
TIMP1-201ENST00000218388 DGKZQ13574 1117 aa15.35■□□□□ 0.05
TIMP1-201ENST00000218388 RTN1Q16799 776 aa15.35■□□□□ 0.05
TIMP1-201ENST00000218388 KIAA1755Q5JYT7 1200 aa15.35■□□□□ 0.05
TIMP1-201ENST00000218388 NOL8Q76FK4 1167 aaKnown RBP15.35■□□□□ 0.05
TIMP1-201ENST00000218388 FAM160B2Q86V87 743 aa15.35■□□□□ 0.05
TIMP1-201ENST00000218388 CHURC1Q8WUH1 139 aa15.35■□□□□ 0.05
TIMP1-201ENST00000218388 ZSCAN31Q96LW9 406 aaPredicted RBP15.35■□□□□ 0.05
TIMP1-201ENST00000218388 MYL10Q9BUA6 226 aa15.35■□□□□ 0.05
TIMP1-201ENST00000218388 FEM1BQ9UK73 627 aa15.35■□□□□ 0.05
TIMP1-201ENST00000218388 NID2Q14112 1375 aa15.35■□□□□ 0.05
TIMP1-201ENST00000218388 TMEM232C9JQI7 657 aa15.34■□□□□ 0.05
TIMP1-201ENST00000218388 PDIA3P30101 505 aaKnown RBP15.34■□□□□ 0.05
TIMP1-201ENST00000218388 TM4SF4P48230 202 aa15.34■□□□□ 0.05
TIMP1-201ENST00000218388 MOGSQ13724 837 aa15.34■□□□□ 0.05
TIMP1-201ENST00000218388 TREML2Q5T2D2 321 aa15.34■□□□□ 0.05
TIMP1-201ENST00000218388 KCTD1Q719H9 257 aa15.34■□□□□ 0.05
TIMP1-201ENST00000218388 FANCBQ8NB91 859 aa15.34■□□□□ 0.05
TIMP1-201ENST00000218388 NUP88Q99567 741 aaPredicted RBP15.34■□□□□ 0.05
TIMP1-201ENST00000218388 LZTS2Q9BRK4 669 aa15.34■□□□□ 0.05
TIMP1-201ENST00000218388 SLKQ9H2G2 1235 aaPredicted RBP15.34■□□□□ 0.05
TIMP1-201ENST00000218388 SH2B1Q9NRF2 756 aaPredicted RBP15.34■□□□□ 0.05
TIMP1-201ENST00000218388 THSD7BQ9C0I4 1608 aa15.34■□□□□ 0.05
TIMP1-201ENST00000218388 FRMPD2Q68DX3 1309 aaPredicted RBP15.34■□□□□ 0.05
TIMP1-201ENST00000218388 MYPNQ86TC9 1320 aa15.34■□□□□ 0.05
TIMP1-201ENST00000218388 BTBD19C9JJ37 291 aa15.33■□□□□ 0.04
TIMP1-201ENST00000218388 PDHXO00330 501 aa15.33■□□□□ 0.04
TIMP1-201ENST00000218388 DHX16O60231 1041 aaKnown RBP15.33■□□□□ 0.04
TIMP1-201ENST00000218388 PLA2G6O60733 806 aa15.33■□□□□ 0.04
TIMP1-201ENST00000218388 AOC2O75106 756 aa15.33■□□□□ 0.04
TIMP1-201ENST00000218388 FLOT1O75955 427 aa15.33■□□□□ 0.04
TIMP1-201ENST00000218388 ALDH1A1P00352 501 aa15.33■□□□□ 0.04
TIMP1-201ENST00000218388 RXRAP19793 462 aa15.33■□□□□ 0.04
TIMP1-201ENST00000218388 GPAT2Q6NUI2 795 aa15.33■□□□□ 0.04
TIMP1-201ENST00000218388 CPLX2Q6PUV4 134 aaKnown RBP15.33■□□□□ 0.04
TIMP1-201ENST00000218388 CATSPERGQ6ZRH7 1159 aa15.33■□□□□ 0.04
TIMP1-201ENST00000218388 IFNL1Q8IU54 200 aa15.33■□□□□ 0.04
TIMP1-201ENST00000218388 CCDC144CPQ8IYA2 1237 aa15.33■□□□□ 0.04
TIMP1-201ENST00000218388 GTF3C2Q8WUA4 911 aaPredicted RBP15.33■□□□□ 0.04
TIMP1-201ENST00000218388 PARK7Q99497 189 aaKnown RBP15.33■□□□□ 0.04
TIMP1-201ENST00000218388 LARP6Q9BRS8 491 aaKnown RBP15.33■□□□□ 0.04
TIMP1-201ENST00000218388 GPCPD1Q9NPB8 672 aa15.33■□□□□ 0.04
TIMP1-201ENST00000218388 MAD2L2Q9UI95 211 aa15.33■□□□□ 0.04
TIMP1-201ENST00000218388 TPCN1Q9ULQ1 816 aa15.33■□□□□ 0.04
TIMP1-201ENST00000218388 PALM3A6NDB9 673 aaPredicted RBP15.32■□□□□ 0.04
TIMP1-201ENST00000218388 KLRF2D3W0D1 207 aa15.32■□□□□ 0.04
TIMP1-201ENST00000218388 CPLX1O14810 134 aa15.32■□□□□ 0.04
TIMP1-201ENST00000218388 GOLGA8HP0CJ92 632 aa15.32■□□□□ 0.04
TIMP1-201ENST00000218388 FDX1P10109 184 aa15.32■□□□□ 0.04
TIMP1-201ENST00000218388 COG2Q14746 738 aa15.32■□□□□ 0.04
TIMP1-201ENST00000218388 RASGRP2Q7LDG7 609 aa15.32■□□□□ 0.04
TIMP1-201ENST00000218388 RAB11FIP4Q86YS3 637 aa15.32■□□□□ 0.04
TIMP1-201ENST00000218388 HSCBQ8IWL3 235 aa15.32■□□□□ 0.04
TIMP1-201ENST00000218388 PRPF38AQ8NAV1 312 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms