RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 CATIPQ7Z7H3 387 aa14.42□□□□□ -0.1
LINC00339-213ENST00000642137 PNMA1Q8ND90 353 aa14.42□□□□□ -0.1
LINC00339-213ENST00000642137 MAP3K14Q99558 947 aa14.42□□□□□ -0.1
LINC00339-213ENST00000642137 VCPKMTQ9H867 229 aa14.42□□□□□ -0.1
LINC00339-213ENST00000642137 CREBZFQ9NS37 354 aa14.42□□□□□ -0.1
LINC00339-213ENST00000642137 KCNH4Q9UQ05 1017 aa14.42□□□□□ -0.1
LINC00339-213ENST00000642137 SLC12A7Q9Y666 1083 aa14.42□□□□□ -0.1
LINC00339-213ENST00000642137 F5H6K3 240 aa14.41□□□□□ -0.1
LINC00339-213ENST00000642137 CALM1P0DP23 149 aa14.41□□□□□ -0.1
LINC00339-213ENST00000642137 CALM2P0DP24 149 aa14.41□□□□□ -0.1
LINC00339-213ENST00000642137 CALM3P0DP25 149 aa14.41□□□□□ -0.1
LINC00339-213ENST00000642137 RCAN1P53805 252 aa14.41□□□□□ -0.1
LINC00339-213ENST00000642137 KLRC3Q07444 240 aa14.41□□□□□ -0.1
LINC00339-213ENST00000642137 APOBRQ0VD83 1088 aa14.41□□□□□ -0.1
LINC00339-213ENST00000642137 TROAPQ12815 778 aa14.41□□□□□ -0.1
LINC00339-213ENST00000642137 USP17L2Q6R6M4 530 aa14.41□□□□□ -0.1
LINC00339-213ENST00000642137 ZNF654Q8IZM8 581 aa14.41□□□□□ -0.1
LINC00339-213ENST00000642137 GMCL1P1Q8NEA9 526 aa14.41□□□□□ -0.1
LINC00339-213ENST00000642137 CNKSR2Q8WXI2 1034 aa14.41□□□□□ -0.1
LINC00339-213ENST00000642137 SNX21Q969T3 373 aa14.41□□□□□ -0.1
LINC00339-213ENST00000642137 OTUD5Q96G74 571 aa14.41□□□□□ -0.1
LINC00339-213ENST00000642137 WNK4Q96J92 1243 aa14.41□□□□□ -0.1
LINC00339-213ENST00000642137 ZSCAN31Q96LW9 406 aaPredicted RBP14.41□□□□□ -0.1
LINC00339-213ENST00000642137 GOPCQ9HD26 462 aa14.41□□□□□ -0.1
LINC00339-213ENST00000642137 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.41□□□□□ -0.1
LINC00339-213ENST00000642137 BRPF3Q9ULD4 1205 aa14.41□□□□□ -0.1
LINC00339-213ENST00000642137 ABT1Q9ULW3 272 aaKnown RBP14.41□□□□□ -0.1
LINC00339-213ENST00000642137 LIMCH1Q9UPQ0 1083 aa14.41□□□□□ -0.1
LINC00339-213ENST00000642137 KLF18A0A0U1RQI7 1052 aa14.4□□□□□ -0.1
LINC00339-213ENST00000642137 IRF6O14896 467 aa14.4□□□□□ -0.1
LINC00339-213ENST00000642137 DDAH1O94760 285 aa14.4□□□□□ -0.1
LINC00339-213ENST00000642137 ZBTB48P10074 688 aaPredicted RBP14.4□□□□□ -0.1
LINC00339-213ENST00000642137 GJA5P36382 358 aa14.4□□□□□ -0.1
LINC00339-213ENST00000642137 ZNF157P51786 506 aaPredicted RBP14.4□□□□□ -0.1
LINC00339-213ENST00000642137 PPP2R5BQ15173 497 aa14.4□□□□□ -0.1
LINC00339-213ENST00000642137 SPRYD7Q5W111 196 aa14.4□□□□□ -0.1
LINC00339-213ENST00000642137 SLFN13Q68D06 897 aa14.4□□□□□ -0.1
LINC00339-213ENST00000642137 APOA5Q6Q788 366 aa14.4□□□□□ -0.1
LINC00339-213ENST00000642137 LRRC47Q8N1G4 583 aaKnown RBP14.4□□□□□ -0.1
LINC00339-213ENST00000642137 LPAR1Q92633 364 aa14.4□□□□□ -0.1
LINC00339-213ENST00000642137 CCDC102AQ96A19 550 aa14.4□□□□□ -0.1
LINC00339-213ENST00000642137 C12orf42Q96LP6 360 aa14.4□□□□□ -0.1
LINC00339-213ENST00000642137 FEZ1Q99689 392 aa14.4□□□□□ -0.1
LINC00339-213ENST00000642137 TPCN1Q9ULQ1 816 aa14.4□□□□□ -0.1
LINC00339-213ENST00000642137 TRIM75PA6NK02 468 aa14.39□□□□□ -0.11
LINC00339-213ENST00000642137 ZBTB43O43298 467 aa14.39□□□□□ -0.11
LINC00339-213ENST00000642137 SNHG28P0DPA3 235 aa14.39□□□□□ -0.11
LINC00339-213ENST00000642137 PDIA3P30101 505 aaKnown RBP14.39□□□□□ -0.11
LINC00339-213ENST00000642137 MTMR2Q13614 643 aa14.39□□□□□ -0.11
LINC00339-213ENST00000642137 DEFB115Q30KQ5 88 aa14.39□□□□□ -0.11
LINC00339-213ENST00000642137 DCAF4Q8WV16 495 aa14.39□□□□□ -0.11
LINC00339-213ENST00000642137 LARP6Q9BRS8 491 aaKnown RBP14.39□□□□□ -0.11
LINC00339-213ENST00000642137 TSHZ2Q9NRE2 1034 aa14.39□□□□□ -0.11
LINC00339-213ENST00000642137 EMILIN3Q9NT22 766 aa14.39□□□□□ -0.11
LINC00339-213ENST00000642137 A0A0G2JLL6 359 aaPredicted RBP14.38□□□□□ -0.11
LINC00339-213ENST00000642137 RASSF10A6NK89 507 aa14.38□□□□□ -0.11
LINC00339-213ENST00000642137 CD2BP2O95400 341 aaKnown RBP14.38□□□□□ -0.11
LINC00339-213ENST00000642137 NDUFB10O96000 172 aa14.38□□□□□ -0.11
LINC00339-213ENST00000642137 SLC10A3P09131 477 aa14.38□□□□□ -0.11
LINC00339-213ENST00000642137 PDHBP11177 359 aa14.38□□□□□ -0.11
LINC00339-213ENST00000642137 GTF2A2P52657 109 aa14.38□□□□□ -0.11
LINC00339-213ENST00000642137 SNAPC2Q13487 334 aa14.38□□□□□ -0.11
LINC00339-213ENST00000642137 GRM4Q14833 912 aa14.38□□□□□ -0.11
LINC00339-213ENST00000642137 ME3Q16798 604 aa14.38□□□□□ -0.11
LINC00339-213ENST00000642137 FASTKD5Q7L8L6 764 aaKnown RBP14.38□□□□□ -0.11
LINC00339-213ENST00000642137 PRRT2Q7Z6L0 340 aaPredicted RBP14.38□□□□□ -0.11
LINC00339-213ENST00000642137 RASAL3Q86YV0 1011 aa14.38□□□□□ -0.11
LINC00339-213ENST00000642137 FANCBQ8NB91 859 aa14.38□□□□□ -0.11
LINC00339-213ENST00000642137 PROCA1Q8NCQ7 364 aaPredicted RBP14.38□□□□□ -0.11
LINC00339-213ENST00000642137 NUP133Q8WUM0 1156 aa14.38□□□□□ -0.11
LINC00339-213ENST00000642137 CHMP4CQ96CF2 233 aa14.38□□□□□ -0.11
LINC00339-213ENST00000642137 GMCL1Q96IK5 515 aa14.38□□□□□ -0.11
LINC00339-213ENST00000642137 SH2B1Q9NRF2 756 aaPredicted RBP14.38□□□□□ -0.11
LINC00339-213ENST00000642137 TMOD4Q9NZQ9 345 aa14.38□□□□□ -0.11
LINC00339-213ENST00000642137 PALM3A6NDB9 673 aaPredicted RBP14.37□□□□□ -0.11
LINC00339-213ENST00000642137 PFKFB2O60825 505 aa14.37□□□□□ -0.11
LINC00339-213ENST00000642137 PARP1P09874 1014 aaKnown RBP14.37□□□□□ -0.11
LINC00339-213ENST00000642137 BMP3P12645 472 aa14.37□□□□□ -0.11
LINC00339-213ENST00000642137 SLC1A4P43007 532 aa14.37□□□□□ -0.11
LINC00339-213ENST00000642137 GNAQP50148 359 aa14.37□□□□□ -0.11
LINC00339-213ENST00000642137 HMGCS2P54868 508 aa14.37□□□□□ -0.11
LINC00339-213ENST00000642137 ZYXQ15942 572 aaKnown RBP14.37□□□□□ -0.11
LINC00339-213ENST00000642137 ASPRV1Q53RT3 343 aa14.37□□□□□ -0.11
LINC00339-213ENST00000642137 KIAA1755Q5JYT7 1200 aa14.37□□□□□ -0.11
LINC00339-213ENST00000642137 GPATCH4Q5T3I0 446 aaKnown RBP14.37□□□□□ -0.11
LINC00339-213ENST00000642137 CTCFLQ8NI51 663 aaPredicted RBP14.37□□□□□ -0.11
LINC00339-213ENST00000642137 MS4A4AQ96JQ5 239 aa14.37□□□□□ -0.11
LINC00339-213ENST00000642137 MYL10Q9BUA6 226 aa14.37□□□□□ -0.11
LINC00339-213ENST00000642137 SLKQ9H2G2 1235 aaPredicted RBP14.37□□□□□ -0.11
LINC00339-213ENST00000642137 RBM28Q9NW13 759 aaKnown RBP14.37□□□□□ -0.11
LINC00339-213ENST00000642137 NAP1L2Q9ULW6 460 aaPredicted RBP14.37□□□□□ -0.11
LINC00339-213ENST00000642137 HPS5Q9UPZ3 1129 aa14.37□□□□□ -0.11
LINC00339-213ENST00000642137 PTPRFP10586 1907 aa14.37□□□□□ -0.11
LINC00339-213ENST00000642137 NID2Q14112 1375 aa14.36□□□□□ -0.11
LINC00339-213ENST00000642137 CCDC196A0A1B0GTZ2 297 aa14.36□□□□□ -0.11
LINC00339-213ENST00000642137 TESPA1A2RU30 521 aaPredicted RBP14.36□□□□□ -0.11
LINC00339-213ENST00000642137 FAM155AB1AL88 458 aaPredicted RBP14.36□□□□□ -0.11
LINC00339-213ENST00000642137 WDR46O15213 610 aaKnown RBP14.36□□□□□ -0.11
LINC00339-213ENST00000642137 RAD21O60216 631 aa14.36□□□□□ -0.11
LINC00339-213ENST00000642137 PLA2G6O60733 806 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms