RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 PF4P02776 101 aa9.34□□□□□ -0.91
SCARB2-209ENST00000638409 HMGB2P26583 209 aaKnown RBP9.34□□□□□ -0.91
SCARB2-209ENST00000638409 NGEFQ8N5V2 710 aa9.34□□□□□ -0.91
SCARB2-209ENST00000638409 C3orf58Q8NDZ4 430 aa9.34□□□□□ -0.91
SCARB2-209ENST00000638409 FBXO27Q8NI29 283 aa9.34□□□□□ -0.91
SCARB2-209ENST00000638409 AASDHPPTQ9NRN7 309 aa9.34□□□□□ -0.91
SCARB2-209ENST00000638409 ATG3Q9NT62 314 aa9.34□□□□□ -0.91
SCARB2-209ENST00000638409 TPX2Q9ULW0 747 aaKnown RBP9.34□□□□□ -0.91
SCARB2-209ENST00000638409 UBR2Q8IWV8 1755 aa9.34□□□□□ -0.91
SCARB2-209ENST00000638409 VSTM5A8MXK1 200 aa9.34□□□□□ -0.91
SCARB2-209ENST00000638409 APAF1O14727 1248 aa9.34□□□□□ -0.91
SCARB2-209ENST00000638409 TLR3O15455 904 aaKnown RBP9.34□□□□□ -0.91
SCARB2-209ENST00000638409 GREM1O60565 184 aa9.34□□□□□ -0.91
SCARB2-209ENST00000638409 SETDB1Q15047 1291 aa9.34□□□□□ -0.91
SCARB2-209ENST00000638409 SLC27A3Q5K4L6 730 aa9.34□□□□□ -0.91
SCARB2-209ENST00000638409 DEFB132Q7Z7B7 95 aa9.34□□□□□ -0.91
SCARB2-209ENST00000638409 TRIM8Q9BZR9 551 aa9.34□□□□□ -0.91
SCARB2-209ENST00000638409 NUP188Q5SRE5 1749 aa9.34□□□□□ -0.91
SCARB2-209ENST00000638409 GRM2Q14416 872 aa9.33□□□□□ -0.92
SCARB2-209ENST00000638409 KCTD2Q14681 263 aa9.33□□□□□ -0.92
SCARB2-209ENST00000638409 MCM10Q7L590 875 aa9.33□□□□□ -0.92
SCARB2-209ENST00000638409 BABAM1Q9NWV8 329 aa9.33□□□□□ -0.92
SCARB2-209ENST00000638409 LUZP4Q9P127 313 aa9.33□□□□□ -0.92
SCARB2-209ENST00000638409 ANAPC4Q9UJX5 808 aa9.33□□□□□ -0.92
SCARB2-209ENST00000638409 GADD45BO75293 160 aaPredicted RBP9.33□□□□□ -0.92
SCARB2-209ENST00000638409 DDAH1O94760 285 aa9.33□□□□□ -0.92
SCARB2-209ENST00000638409 PGRP06401 933 aa9.33□□□□□ -0.92
SCARB2-209ENST00000638409 FAM153BP0C7A2 387 aa9.33□□□□□ -0.92
SCARB2-209ENST00000638409 TEFQ10587 303 aa9.33□□□□□ -0.92
SCARB2-209ENST00000638409 PABPC4Q13310 644 aaKnown RBP eCLIP9.33□□□□□ -0.92
SCARB2-209ENST00000638409 GRIN2CQ14957 1233 aa9.33□□□□□ -0.92
SCARB2-209ENST00000638409 EZH2Q15910 746 aaKnown RBP9.33□□□□□ -0.92
SCARB2-209ENST00000638409 C11orf91Q3C1V1 193 aa9.33□□□□□ -0.92
SCARB2-209ENST00000638409 ANO1Q5XXA6 986 aa9.33□□□□□ -0.92
SCARB2-209ENST00000638409 MRM1Q6IN84 353 aaKnown RBP9.33□□□□□ -0.92
SCARB2-209ENST00000638409 TTC16Q8NEE8 873 aa9.33□□□□□ -0.92
SCARB2-209ENST00000638409 SLC4A9Q96Q91 983 aa9.33□□□□□ -0.92
SCARB2-209ENST00000638409 ASAP1Q9ULH1 1129 aa9.33□□□□□ -0.92
SCARB2-209ENST00000638409 PALLDQ8WX93 1383 aa9.33□□□□□ -0.92
SCARB2-209ENST00000638409 PCSK2P16519 638 aa9.32□□□□□ -0.92
SCARB2-209ENST00000638409 TAF7Q15545 349 aaPredicted RBP9.32□□□□□ -0.92
SCARB2-209ENST00000638409 PPP2R5EQ16537 467 aa9.32□□□□□ -0.92
SCARB2-209ENST00000638409 RINLQ6ZS11 566 aa9.32□□□□□ -0.92
SCARB2-209ENST00000638409 TARS2Q9BW92 718 aaKnown RBP9.32□□□□□ -0.92
SCARB2-209ENST00000638409 CDV3Q9UKY7 258 aaKnown RBP9.32□□□□□ -0.92
SCARB2-209ENST00000638409 KDM3BQ7LBC6 1761 aa9.32□□□□□ -0.92
SCARB2-209ENST00000638409 KCPQ6ZWJ8 1503 aa9.32□□□□□ -0.92
SCARB2-209ENST00000638409 ZPR1O75312 459 aa9.32□□□□□ -0.92
SCARB2-209ENST00000638409 MAN1A1P33908 653 aa9.32□□□□□ -0.92
SCARB2-209ENST00000638409 EIF6P56537 245 aaKnown RBP9.32□□□□□ -0.92
SCARB2-209ENST00000638409 COL9A2Q14055 689 aaPredicted RBP9.32□□□□□ -0.92
SCARB2-209ENST00000638409 TXNRD1Q16881 649 aa9.32□□□□□ -0.92
SCARB2-209ENST00000638409 C6orf15Q6UXA7 325 aaPredicted RBP9.32□□□□□ -0.92
SCARB2-209ENST00000638409 BPHLQ86WA6 291 aaPredicted RBP9.32□□□□□ -0.92
SCARB2-209ENST00000638409 STAG2Q8N3U4 1231 aa9.32□□□□□ -0.92
SCARB2-209ENST00000638409 ZNF180Q9UJW8 692 aa9.32□□□□□ -0.92
SCARB2-209ENST00000638409 GSG1L2A8MUP6 293 aa9.31□□□□□ -0.92
SCARB2-209ENST00000638409 SERPINB3P29508 390 aa9.31□□□□□ -0.92
SCARB2-209ENST00000638409 SOX5P35711 763 aa9.31□□□□□ -0.92
SCARB2-209ENST00000638409 ERVK-9P63128 1117 aa9.31□□□□□ -0.92
SCARB2-209ENST00000638409 DCTN1Q14203 1278 aa9.31□□□□□ -0.92
SCARB2-209ENST00000638409 CTC1Q2NKJ3 1217 aa9.31□□□□□ -0.92
SCARB2-209ENST00000638409 DGKHQ86XP1 1220 aa9.31□□□□□ -0.92
SCARB2-209ENST00000638409 PHC3Q8NDX5 983 aa9.31□□□□□ -0.92
SCARB2-209ENST00000638409 NKD1Q969G9 470 aa9.31□□□□□ -0.92
SCARB2-209ENST00000638409 TMPRSS4Q9NRS4 437 aa9.31□□□□□ -0.92
SCARB2-209ENST00000638409 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.31□□□□□ -0.92
SCARB2-209ENST00000638409 TAF1LQ8IZX4 1826 aa9.31□□□□□ -0.92
SCARB2-209ENST00000638409 EML1O00423 815 aa9.31□□□□□ -0.92
SCARB2-209ENST00000638409 MYL3P08590 195 aa9.31□□□□□ -0.92
SCARB2-209ENST00000638409 PWP1Q13610 501 aa9.31□□□□□ -0.92
SCARB2-209ENST00000638409 FAM102BQ5T8I3 360 aa9.31□□□□□ -0.92
SCARB2-209ENST00000638409 ICE2Q659A1 982 aa9.31□□□□□ -0.92
SCARB2-209ENST00000638409 MAGEB6Q8N7X4 407 aa9.31□□□□□ -0.92
SCARB2-209ENST00000638409 BCS1LQ9Y276 419 aa9.31□□□□□ -0.92
SCARB2-209ENST00000638409 RRP7AQ9Y3A4 280 aaKnown RBP9.31□□□□□ -0.92
SCARB2-209ENST00000638409 BTBD11A6QL63 1104 aa9.3□□□□□ -0.92
SCARB2-209ENST00000638409 EPB42P16452 691 aa9.3□□□□□ -0.92
SCARB2-209ENST00000638409 GIPRP48546 466 aa9.3□□□□□ -0.92
SCARB2-209ENST00000638409 RASSF7Q02833 373 aa9.3□□□□□ -0.92
SCARB2-209ENST00000638409 STRN3Q13033 797 aa9.3□□□□□ -0.92
SCARB2-209ENST00000638409 ZNF790Q6PG37 636 aa9.3□□□□□ -0.92
SCARB2-209ENST00000638409 TCEAL8Q8IYN2 117 aa9.3□□□□□ -0.92
SCARB2-209ENST00000638409 ANKRD42Q8N9B4 389 aa9.3□□□□□ -0.92
SCARB2-209ENST00000638409 KCTD15Q96SI1 283 aaPredicted RBP9.3□□□□□ -0.92
SCARB2-209ENST00000638409 KCNQ5Q9NR82 932 aa9.3□□□□□ -0.92
SCARB2-209ENST00000638409 PPP2R3BQ9Y5P8 575 aa9.3□□□□□ -0.92
SCARB2-209ENST00000638409 C5P01031 1676 aa9.3□□□□□ -0.92
SCARB2-209ENST00000638409 LOC102724428A0A0B4J2F2 783 aa9.3□□□□□ -0.92
SCARB2-209ENST00000638409 NBNO60934 754 aa9.3□□□□□ -0.92
SCARB2-209ENST00000638409 EYA4O95677 639 aa9.3□□□□□ -0.92
SCARB2-209ENST00000638409 SIK1P57059 783 aa9.3□□□□□ -0.92
SCARB2-209ENST00000638409 CALD1Q05682 793 aaKnown RBP9.3□□□□□ -0.92
SCARB2-209ENST00000638409 INTS6LQ5JSJ4 861 aaKnown RBP9.3□□□□□ -0.92
SCARB2-209ENST00000638409 TPH2Q8IWU9 490 aa9.3□□□□□ -0.92
SCARB2-209ENST00000638409 ZDHHC1Q8WTX9 485 aa9.3□□□□□ -0.92
SCARB2-209ENST00000638409 SRCIN1Q9C0H9 1055 aa9.3□□□□□ -0.92
SCARB2-209ENST00000638409 NBPF3Q9H094 633 aa9.3□□□□□ -0.92
SCARB2-209ENST00000638409 LRRC4BQ9NT99 713 aa9.3□□□□□ -0.92
SCARB2-209ENST00000638409 ZNF232Q9UNY5 417 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms