RNA–Protein interactions for RNA: ENST00000637786.1

CHRNA7-231, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 1 (best)

Gene CHRNA7, Length 383 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-231ENST00000637786 ERICH2A1L162 156 aa26.31■■□□□ 1.8
CHRNA7-231ENST00000637786 TOP1P11387 765 aaKnown RBP26.31■■□□□ 1.8
CHRNA7-231ENST00000637786 HMGCS2P54868 508 aa26.31■■□□□ 1.8
CHRNA7-231ENST00000637786 EXOSC10Q01780 885 aaKnown RBP26.31■■□□□ 1.8
CHRNA7-231ENST00000637786 KIF23Q02241 960 aaPredicted RBP26.31■■□□□ 1.8
CHRNA7-231ENST00000637786 SEC23AQ15436 765 aa26.31■■□□□ 1.8
CHRNA7-231ENST00000637786 CCL15Q16663 113 aa26.31■■□□□ 1.8
CHRNA7-231ENST00000637786 BLOC1S2Q6QNY1 142 aa26.31■■□□□ 1.8
CHRNA7-231ENST00000637786 DNAJC5GQ8N7S2 189 aa26.31■■□□□ 1.8
CHRNA7-231ENST00000637786 LPAR1Q92633 364 aa26.31■■□□□ 1.8
CHRNA7-231ENST00000637786 VCPKMTQ9H867 229 aa26.31■■□□□ 1.8
CHRNA7-231ENST00000637786 GOPCQ9HD26 462 aa26.31■■□□□ 1.8
CHRNA7-231ENST00000637786 TMOD4Q9NZQ9 345 aa26.31■■□□□ 1.8
CHRNA7-231ENST00000637786 IFIT3O14879 490 aaKnown RBP26.3■■□□□ 1.8
CHRNA7-231ENST00000637786 AOC2O75106 756 aa26.3■■□□□ 1.8
CHRNA7-231ENST00000637786 TM4SF4P48230 202 aa26.3■■□□□ 1.8
CHRNA7-231ENST00000637786 MOGSQ13724 837 aa26.3■■□□□ 1.8
CHRNA7-231ENST00000637786 BRI3BPQ8WY22 251 aa26.3■■□□□ 1.8
CHRNA7-231ENST00000637786 ZSWIM6Q9HCJ5 1215 aa26.3■■□□□ 1.8
CHRNA7-231ENST00000637786 EMILIN3Q9NT22 766 aa26.3■■□□□ 1.8
CHRNA7-231ENST00000637786 CASTP20810 708 aaKnown RBP26.29■■□□□ 1.8
CHRNA7-231ENST00000637786 COL9A3Q14050 684 aaPredicted RBP26.29■■□□□ 1.8
CHRNA7-231ENST00000637786 GMCL1P1Q8NEA9 526 aa26.29■■□□□ 1.8
CHRNA7-231ENST00000637786 IGDCC4Q8TDY8 1250 aa26.29■■□□□ 1.8
CHRNA7-231ENST00000637786 ZIC5Q96T25 663 aa26.29■■□□□ 1.8
CHRNA7-231ENST00000637786 TMEM47Q9BQJ4 181 aa26.29■■□□□ 1.8
CHRNA7-231ENST00000637786 RPS6KB1P23443 525 aa26.28■■□□□ 1.8
CHRNA7-231ENST00000637786 TMEM67Q5HYA8 995 aa26.28■■□□□ 1.8
CHRNA7-231ENST00000637786 CHST3Q7LGC8 479 aa26.28■■□□□ 1.8
CHRNA7-231ENST00000637786 ZCCHC17Q9NP64 241 aaKnown RBP26.28■■□□□ 1.8
CHRNA7-231ENST00000637786 WTAPQ15007 396 aa26.27■■□□□ 1.8
CHRNA7-231ENST00000637786 ZYXQ15942 572 aaKnown RBP26.27■■□□□ 1.8
CHRNA7-231ENST00000637786 IFIT1BQ5T764 474 aaKnown RBP26.27■■□□□ 1.8
CHRNA7-231ENST00000637786 GADL1Q6ZQY3 521 aa26.27■■□□□ 1.8
CHRNA7-231ENST00000637786 RUFY3Q7L099 469 aa26.27■■□□□ 1.8
CHRNA7-231ENST00000637786 ANKRD23Q86SG2 305 aa26.27■■□□□ 1.8
CHRNA7-231ENST00000637786 LRRC47Q8N1G4 583 aaKnown RBP26.27■■□□□ 1.8
CHRNA7-231ENST00000637786 TMTC2Q8N394 836 aa26.27■■□□□ 1.8
CHRNA7-231ENST00000637786 AGTPBP1Q9UPW5 1226 aa26.27■■□□□ 1.8
CHRNA7-231ENST00000637786 SLC45A1Q9Y2W3 748 aa26.27■■□□□ 1.8
CHRNA7-231ENST00000637786 CYP46A1Q9Y6A2 500 aa26.27■■□□□ 1.8
CHRNA7-231ENST00000637786 F5H6K3 240 aa26.26■■□□□ 1.79
CHRNA7-231ENST00000637786 SH2B2O14492 632 aaPredicted RBP26.26■■□□□ 1.79
CHRNA7-231ENST00000637786 LIFRP42702 1097 aa26.26■■□□□ 1.79
CHRNA7-231ENST00000637786 KLRC3Q07444 240 aa26.26■■□□□ 1.79
CHRNA7-231ENST00000637786 FBXL16Q8N461 479 aa26.26■■□□□ 1.79
CHRNA7-231ENST00000637786 TBC1D32Q96NH3 1257 aa26.26■■□□□ 1.79
CHRNA7-231ENST00000637786 KAT14Q9H8E8 782 aa26.26■■□□□ 1.79
CHRNA7-231ENST00000637786 VCAM1P19320 739 aa26.25■■□□□ 1.79
CHRNA7-231ENST00000637786 OTUD7BQ6GQQ9 843 aa26.25■■□□□ 1.79
CHRNA7-231ENST00000637786 GPAT2Q6NUI2 795 aa26.25■■□□□ 1.79
CHRNA7-231ENST00000637786 IFNL1Q8IU54 200 aa26.25■■□□□ 1.79
CHRNA7-231ENST00000637786 PTPN18Q99952 460 aa26.25■■□□□ 1.79
CHRNA7-231ENST00000637786 LY9Q9HBG7 655 aa26.25■■□□□ 1.79
CHRNA7-231ENST00000637786 BTBD19C9JJ37 291 aa26.24■■□□□ 1.79
CHRNA7-231ENST00000637786 WDR46O15213 610 aaKnown RBP26.24■■□□□ 1.79
CHRNA7-231ENST00000637786 NDUFB10O96000 172 aa26.24■■□□□ 1.79
CHRNA7-231ENST00000637786 HOXA7P31268 230 aaPredicted RBP26.24■■□□□ 1.79
CHRNA7-231ENST00000637786 PABPC4Q13310 644 aaKnown RBP eCLIP26.24■■□□□ 1.79
CHRNA7-231ENST00000637786 KIAA1755Q5JYT7 1200 aa26.24■■□□□ 1.79
CHRNA7-231ENST00000637786 PNMA1Q8ND90 353 aa26.24■■□□□ 1.79
CHRNA7-231ENST00000637786 GMCL1Q96IK5 515 aa26.24■■□□□ 1.79
CHRNA7-231ENST00000637786 CPA1P15085 419 aa26.23■■□□□ 1.79
CHRNA7-231ENST00000637786 DGKZQ13574 1117 aa26.23■■□□□ 1.79
CHRNA7-231ENST00000637786 SLFN13Q68D06 897 aa26.23■■□□□ 1.79
CHRNA7-231ENST00000637786 SGMS1Q86VZ5 419 aa26.23■■□□□ 1.79
CHRNA7-231ENST00000637786 AGXT2Q9BYV1 514 aa26.23■■□□□ 1.79
CHRNA7-231ENST00000637786 CEP350Q5VT06 3117 aa26.22■■□□□ 1.79
CHRNA7-231ENST00000637786 IGF2BP3O00425 579 aaKnown RBP eCLIP26.22■■□□□ 1.79
CHRNA7-231ENST00000637786 ALDH1A1P00352 501 aa26.22■■□□□ 1.79
CHRNA7-231ENST00000637786 TREML2Q5T2D2 321 aa26.22■■□□□ 1.79
CHRNA7-231ENST00000637786 SPICE1Q8N0Z3 855 aa26.22■■□□□ 1.79
CHRNA7-231ENST00000637786 FAM43AQ8N2R8 423 aa26.22■■□□□ 1.79
CHRNA7-231ENST00000637786 DCAF4Q8WV16 495 aa26.22■■□□□ 1.79
CHRNA7-231ENST00000637786 TCEANC2Q96MN5 208 aa26.22■■□□□ 1.79
CHRNA7-231ENST00000637786 LRRC2Q9BYS8 371 aa26.22■■□□□ 1.79
CHRNA7-231ENST00000637786 UPF3BQ9BZI7 483 aaKnown RBP26.22■■□□□ 1.79
CHRNA7-231ENST00000637786 USP17L15C9J2P7 530 aa26.21■■□□□ 1.79
CHRNA7-231ENST00000637786 USP17L13C9JLJ4 530 aa26.21■■□□□ 1.79
CHRNA7-231ENST00000637786 USP17L11C9JVI0 530 aa26.21■■□□□ 1.79
CHRNA7-231ENST00000637786 USP17L18D6R9N7 530 aa26.21■■□□□ 1.79
CHRNA7-231ENST00000637786 USP17L22D6RA61 530 aa26.21■■□□□ 1.79
CHRNA7-231ENST00000637786 USP17L17D6RBQ6 530 aa26.21■■□□□ 1.79
CHRNA7-231ENST00000637786 USP17L19D6RCP7 530 aa26.21■■□□□ 1.79
CHRNA7-231ENST00000637786 USP17L20D6RJB6 530 aa26.21■■□□□ 1.79
CHRNA7-231ENST00000637786 SNHG28P0DPA3 235 aa26.21■■□□□ 1.79
CHRNA7-231ENST00000637786 USP17L24Q0WX57 530 aa26.21■■□□□ 1.79
CHRNA7-231ENST00000637786 IL27Q8NEV9 243 aa26.21■■□□□ 1.79
CHRNA7-231ENST00000637786 KIF2CQ99661 725 aa26.21■■□□□ 1.79
CHRNA7-231ENST00000637786 RPAP3Q9H6T3 665 aaPredicted RBP26.21■■□□□ 1.79
CHRNA7-231ENST00000637786 SENP2Q9HC62 589 aa26.21■■□□□ 1.79
CHRNA7-231ENST00000637786 GPHNQ9NQX3 736 aaPredicted RBP26.21■■□□□ 1.79
CHRNA7-231ENST00000637786 PDHXO00330 501 aa26.2■■□□□ 1.78
CHRNA7-231ENST00000637786 RAD21O60216 631 aa26.2■■□□□ 1.78
CHRNA7-231ENST00000637786 SLC1A4P43007 532 aa26.2■■□□□ 1.78
CHRNA7-231ENST00000637786 FGD1P98174 961 aa26.2■■□□□ 1.78
CHRNA7-231ENST00000637786 MAP2K1Q02750 393 aaPredicted RBP26.2■■□□□ 1.78
CHRNA7-231ENST00000637786 Q6ZUG5 572 aa26.2■■□□□ 1.78
CHRNA7-231ENST00000637786 ALDH8A1Q9H2A2 487 aaPredicted RBP26.2■■□□□ 1.78
CHRNA7-231ENST00000637786 PNMA3Q9UL41 463 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms